##gff-version 3
HG03521_chrY	CAT	gene	163570	165348	.	-	.	source_gene_common_name=LOC124905300;source_gene=hg002_chrY_paternal_1;alternative_source_transcripts=hg002_chrY_paternal_1.1;gene_id=HG03521_ch_G0000001;gene_biotype=protein_coding;gene_name=LOC124905300;gene_sources=liftoff,augTM,transMap;ID=HG03521_ch_G0000001;Name=LOC124905300
HG03521_chrY	CAT	transcript	163570	165348	9970	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_G0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=HG03521_ch_T0000001;Name=LOC124905300
HG03521_chrY	CAT	exon	163570	163599	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03521_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	163570	163599	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03521_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	163570	163572	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=stop_codon:HG03521_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	163600	163674	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03521_ch_T0000001:0;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	163675	164172	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03521_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	163675	164172	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03521_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	164173	164412	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03521_ch_T0000001:1;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	164413	164783	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03521_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	164413	164783	.	-	2	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03521_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	164784	165090	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03521_ch_T0000001:2;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	165091	165128	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03521_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	165091	165128	.	-	1	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03521_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	165129	165307	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=intron:HG03521_ch_T0000001:3;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	165308	165348	.	-	.	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=exon:HG03521_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	165308	165348	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=CDS:HG03521_ch_T0000001:4;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	165346	165348	.	-	0	source_transcript=hg002_chrY_paternal_1.1;source_transcript_name=hg002_chrY_paternal_1.1;source_gene=hg002_chrY_paternal_1;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_1;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_1.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_1.1;transcript_score=299.796;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905300;alternative_source_transcripts=hg002_chrY_paternal_1.1;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000001;gene_id=HG03521_ch_G0000001;Parent=HG03521_ch_T0000001;transcript_name=hg002_chrY_paternal_1.1;gene_name=LOC124905300;ID=start_codon:HG03521_ch_T0000001;Name=LOC124905300;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	164707	191300	.	+	.	source_gene_common_name=PLCXD1;source_gene=hg002_chrY_paternal_2;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;gene_id=HG03521_ch_G0000002;gene_biotype=protein_coding;gene_name=PLCXD1;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000002;Name=PLCXD1
HG03521_chrY	CAT	transcript	164707	191300	100	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03521_ch_T0000002;Name=PLCXD1
HG03521_chrY	CAT	exon	164707	164745	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	164746	169434	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	169435	169637	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	169638	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	172351	172477	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000002:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	172351	172353	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03521_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	177114	177250	.	+	2	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000002:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179029	179157	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000002:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	179755	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179756	179911	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179756	179911	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000002:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179912	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	181292	181475	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000002:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000002:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000002:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	187057	187295	.	+	2	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000002:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	187293	187295	.	+	0	source_transcript=hg002_chrY_paternal_2.1;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.1,hg002_chrY_paternal_2.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000002;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03521_ch_T0000002;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	164707	191300	100	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03521_ch_T0000003;Name=PLCXD1
HG03521_chrY	CAT	exon	164707	164745	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	164746	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	172351	172477	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000003:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	172351	172353	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03521_ch_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	177114	177250	.	+	2	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000003:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179029	179157	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000003:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	179755	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179756	179911	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179756	179911	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000003:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179912	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	181292	181475	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000003:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000003:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	187057	187295	.	+	2	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000003:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	187293	187295	.	+	0	source_transcript=hg002_chrY_paternal_2.2;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.2,hg002_chrY_paternal_2.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000003;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000003;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03521_ch_T0000003;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	164707	191300	100	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03521_ch_T0000004;Name=PLCXD1
HG03521_chrY	CAT	exon	164707	164745	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	164746	169434	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	169435	169637	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	169638	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	172351	172477	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000004:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	172351	172353	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03521_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	177114	177250	.	+	2	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000004:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179029	179157	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000004:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	181292	181475	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000004:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000004:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000004:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	187057	187295	.	+	2	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000004:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	187293	187295	.	+	0	source_transcript=hg002_chrY_paternal_2.3;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.3,hg002_chrY_paternal_2.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000004;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000004;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03521_ch_T0000004;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	164707	191300	1000	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=HG03521_ch_T0000005;Name=PLCXD1
HG03521_chrY	CAT	exon	164707	164745	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	164746	169434	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000005:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	169435	169637	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	169638	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000005:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000005:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000005:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	179755	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000005:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179756	179911	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000005:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179912	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000005:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000005:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000005:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	187352	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000005:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	187353	190536	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000005:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	190537	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.4;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.4,hg002_chrY_paternal_2.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000005;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000005;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000005:8;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	165104	191300	100	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03521_ch_T0000006;Name=PLCXD1
HG03521_chrY	CAT	exon	165104	165118	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	165119	169434	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	169435	169637	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	169638	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	172351	172477	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000006:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	172351	172353	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03521_ch_T0000006;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	177114	177250	.	+	2	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000006:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179029	179157	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000006:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	179755	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179756	179911	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000006:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179756	179911	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000006:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179912	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000006:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000006:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	181292	181475	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000006:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000006:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000006:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	187057	187295	.	+	2	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000006:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	187293	187295	.	+	0	source_transcript=hg002_chrY_paternal_2.5;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.5,hg002_chrY_paternal_2.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000006;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000006;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03521_ch_T0000006;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	169112	191300	100	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03521_ch_T0000007;Name=PLCXD1
HG03521_chrY	CAT	exon	169112	169209	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	169210	169434	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	169435	169637	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	169638	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	172351	172477	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000007:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	172351	172353	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03521_ch_T0000007;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	177114	177250	.	+	2	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000007:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000007:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179029	179157	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000007:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	179755	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000007:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179756	179911	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000007:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179756	179911	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000007:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179912	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000007:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000007:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	181292	181475	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000007:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000007:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000007:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	187057	187295	.	+	2	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000007:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	187293	187295	.	+	0	source_transcript=hg002_chrY_paternal_2.6;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.6,hg002_chrY_paternal_2.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000007;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000007;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03521_ch_T0000007;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	169334	191300	100	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03521_ch_T0000008;Name=PLCXD1
HG03521_chrY	CAT	exon	169334	169637	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	169638	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	172351	172477	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000008:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	172351	172353	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03521_ch_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	177114	177250	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000008:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179029	179157	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000008:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	179755	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179756	179911	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000008:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179756	179911	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000008:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179912	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000008:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000008:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	181292	181475	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000008:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000008:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000008:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	187057	187295	.	+	2	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000008:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	187293	187295	.	+	0	source_transcript=hg002_chrY_paternal_2.7;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.7,hg002_chrY_paternal_2.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000008;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000008;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03521_ch_T0000008;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	169334	191300	1000	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=HG03521_ch_T0000009;Name=PLCXD1
HG03521_chrY	CAT	exon	169334	169637	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	169638	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000009:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000009:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000009:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	179755	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000009:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179756	179911	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000009:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179912	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000009:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000009:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000009:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	187739	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000009:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	187740	189848	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000009:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	189849	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.8;source_transcript_name=hg002_chrY_paternal_2.1;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_2.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.8,hg002_chrY_paternal_2.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000009;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000009;transcript_name=hg002_chrY_paternal_2.1;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000009:7;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	171418	191300	100	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03521_ch_T0000010;Name=PLCXD1
HG03521_chrY	CAT	exon	171418	171460	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	171461	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	172351	172477	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000010:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	172351	172353	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03521_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	177114	177250	.	+	2	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000010:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179029	179157	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000010:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	179755	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179756	179911	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179756	179911	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000010:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179912	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	181292	181475	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000010:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000010:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	187057	187295	.	+	2	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000010:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	187293	187295	.	+	0	source_transcript=hg002_chrY_paternal_2.9;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.9,hg002_chrY_paternal_2.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000010;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000010;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03521_ch_T0000010;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	171458	191300	100	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03521_ch_T0000011;Name=PLCXD1
HG03521_chrY	CAT	exon	171458	171715	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	171716	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	172351	172477	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000011:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	172351	172353	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03521_ch_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	177114	177250	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000011:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179029	179157	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000011:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	179755	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179756	179911	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179756	179911	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000011:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179912	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	181292	181475	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000011:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000011:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	187057	187295	.	+	2	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000011:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	187293	187295	.	+	0	source_transcript=hg002_chrY_paternal_2.10;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.10,hg002_chrY_paternal_2.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000011;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000011;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03521_ch_T0000011;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	171851	191300	100	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_G0000002;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=HG03521_ch_T0000012;Name=PLCXD1
HG03521_chrY	CAT	exon	171851	172196	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172197	172329	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	172330	172477	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	172351	172477	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000012:0;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	172351	172353	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=start_codon:HG03521_ch_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	172478	177113	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	177114	177250	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	177114	177250	.	+	2	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000012:1;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	177251	179028	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179029	179157	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179029	179157	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000012:2;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179158	179755	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	179756	179911	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	179756	179911	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000012:3;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	179912	181291	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	181292	181475	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000012:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	181292	181475	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000012:4;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	181476	187056	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=intron:HG03521_ch_T0000012:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	187057	191300	.	+	.	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=exon:HG03521_ch_T0000012:6;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	187057	187295	.	+	2	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=CDS:HG03521_ch_T0000012:5;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	187293	187295	.	+	0	source_transcript=hg002_chrY_paternal_2.11;source_transcript_name=hg002_chrY_paternal_2.11;source_gene=hg002_chrY_paternal_2;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_2;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_2.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_2.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PLCXD1;alternative_source_transcripts=hg002_chrY_paternal_2.11,hg002_chrY_paternal_2.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000012;gene_id=HG03521_ch_G0000002;Parent=HG03521_ch_T0000012;transcript_name=hg002_chrY_paternal_2.11;gene_name=PLCXD1;ID=stop_codon:HG03521_ch_T0000012;Name=PLCXD1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	192701	209036	.	-	.	source_gene_common_name=GTPBP6;source_gene=hg002_chrY_paternal_3;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;gene_id=HG03521_ch_G0000003;gene_biotype=protein_coding;gene_name=GTPBP6;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000003;Name=GTPBP6
HG03521_chrY	CAT	transcript	192701	207109	100	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03521_ch_T0000013;Name=GTPBP6
HG03521_chrY	CAT	exon	192701	193139	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000013:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	193016	193139	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000013:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	193016	193018	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03521_ch_T0000013;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	193140	194898	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000013:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	194899	195051	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000013:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	194899	195051	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000013:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	195052	195270	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000013:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	195271	195419	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000013:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	195271	195419	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000013:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	195420	198769	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000013:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	198770	198978	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000013:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	198770	198978	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000013:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	198979	199978	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000013:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	199979	200377	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000013:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	199979	200377	.	-	2	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000013:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	200378	201925	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000013:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	201926	201993	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000013:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	201926	201993	.	-	1	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000013:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	201994	202665	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000013:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	202666	202796	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000013:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	202666	202796	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000013:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	202797	203004	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000013:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	203005	203075	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000013:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	203005	203022	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000013:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	203020	203022	.	-	0	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03521_ch_T0000013;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	203076	207043	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000013:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	207044	207109	.	-	.	source_transcript=hg002_chrY_paternal_3.1;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.1,hg002_chrY_paternal_3.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000013;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000013;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000013:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	192701	209036	100	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03521_ch_T0000014;Name=GTPBP6
HG03521_chrY	CAT	exon	192701	193139	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	193016	193139	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	193016	193018	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03521_ch_T0000014;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	193140	194898	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000014:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	194899	195051	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	194899	195051	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	195052	195270	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000014:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	195271	195419	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	195271	195419	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	195420	198769	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000014:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	198770	198978	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	198770	198978	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	198979	200218	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000014:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	200219	200377	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	200219	200377	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	200378	201925	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000014:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	201926	201993	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	201926	201993	.	-	1	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	201994	202665	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000014:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	202666	202796	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	202666	202796	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	202797	203004	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000014:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	203005	203075	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	203005	203075	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	203076	207177	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000014:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	207178	207315	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	207178	207315	.	-	2	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	207316	208678	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000014:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	208679	209036	.	-	.	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000014:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	208679	209027	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000014:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	209025	209027	.	-	0	source_transcript=hg002_chrY_paternal_3.2;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.2,hg002_chrY_paternal_3.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000014;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000014;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03521_ch_T0000014;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	192701	209036	100	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03521_ch_T0000015;Name=GTPBP6
HG03521_chrY	CAT	exon	192701	193139	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	193016	193139	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	193016	193018	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03521_ch_T0000015;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	193140	194898	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000015:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	194899	195051	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	194899	195051	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	195052	195270	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000015:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	195271	195419	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	195271	195419	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	195420	198769	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000015:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	198770	198978	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	198770	198978	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	198979	199978	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000015:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	199979	200377	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	199979	200377	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	200378	201925	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000015:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	201926	201993	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	201926	201993	.	-	1	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	201994	202665	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000015:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	202666	202796	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	202666	202796	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	202797	203004	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000015:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	203005	203075	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	203005	203075	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	203076	207177	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000015:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	207178	207315	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	207178	207315	.	-	2	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	207316	208678	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000015:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	208679	209036	.	-	.	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000015:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	208679	209027	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000015:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	209025	209027	.	-	0	source_transcript=hg002_chrY_paternal_3.3;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.3,hg002_chrY_paternal_3.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000015;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000015;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03521_ch_T0000015;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	192701	209036	100	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03521_ch_T0000016;Name=GTPBP6
HG03521_chrY	CAT	exon	192701	193139	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	193016	193139	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	193016	193018	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03521_ch_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	193140	194898	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000016:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	194899	195051	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	194899	195051	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	195052	195270	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000016:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	195271	195419	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	195271	195419	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	195420	198769	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000016:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	198770	198978	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	198770	198978	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	198979	199978	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000016:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	199979	200377	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	199979	200377	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	200378	201925	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000016:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	201926	201993	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	201926	201993	.	-	1	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	201994	202665	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000016:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	202666	202796	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	202666	202796	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	202797	203004	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000016:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	203005	203075	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	203005	203075	.	-	2	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	203076	207177	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000016:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	207178	207315	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	207178	207247	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	207245	207247	.	-	0	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03521_ch_T0000016;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	207316	207519	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000016:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	207520	207724	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	207725	208678	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000016:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	208679	209036	.	-	.	source_transcript=hg002_chrY_paternal_3.4;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.4,hg002_chrY_paternal_3.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000016;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000016;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000016:10;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	192701	209036	100	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_G0000003;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=HG03521_ch_T0000017;Name=GTPBP6
HG03521_chrY	CAT	exon	192701	193139	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	193016	193139	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	193016	193018	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=stop_codon:HG03521_ch_T0000017;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	193140	194898	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000017:0;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	194899	195051	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	194899	195051	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	195052	195270	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000017:1;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	195271	195419	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	195271	195419	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	195420	198769	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000017:2;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	198770	198978	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	198770	198978	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	198979	199978	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000017:3;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	199979	200377	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	199979	200377	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	200378	201925	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000017:4;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	201926	201993	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	201926	201993	.	-	1	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	201994	202665	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000017:5;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	202666	202796	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	202666	202796	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	202797	203004	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000017:6;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	203005	203075	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	203005	203075	.	-	2	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	203076	207177	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000017:7;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	207178	207315	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	207178	207247	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=CDS:HG03521_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	207245	207247	.	-	0	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=start_codon:HG03521_ch_T0000017;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	207316	207519	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000017:8;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	207520	207659	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	207660	208678	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=intron:HG03521_ch_T0000017:9;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	208679	209036	.	-	.	source_transcript=hg002_chrY_paternal_3.5;source_transcript_name=hg002_chrY_paternal_3.5;source_gene=hg002_chrY_paternal_3;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_3;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_3.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_3.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GTPBP6;alternative_source_transcripts=hg002_chrY_paternal_3.5,hg002_chrY_paternal_3.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000017;gene_id=HG03521_ch_G0000003;Parent=HG03521_ch_T0000017;transcript_name=hg002_chrY_paternal_3.5;gene_name=GTPBP6;ID=exon:HG03521_ch_T0000017:10;Name=GTPBP6;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	209385	211570	.	+	.	source_gene_common_name=LINC00685;source_gene=hg002_chrY_paternal_4;gene_id=HG03521_ch_G0000004;gene_biotype=lncRNA;gene_name=LINC00685;gene_sources=liftoff,transMap_pairwise;ID=HG03521_ch_G0000004;Name=LINC00685
HG03521_chrY	CAT	transcript	209385	211570	1000	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000018;gene_id=HG03521_ch_G0000004;Parent=HG03521_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG03521_ch_T0000018;Name=LINC00685
HG03521_chrY	CAT	exon	209385	211570	.	+	.	source_transcript=hg002_chrY_paternal_4.2;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.2;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000018;gene_id=HG03521_ch_G0000004;Parent=HG03521_ch_T0000018;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG03521_ch_T0000018:0;Name=LINC00685;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	209385	211570	1000	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000019;gene_id=HG03521_ch_G0000004;Parent=HG03521_ch_G0000004;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=HG03521_ch_T0000019;Name=LINC00685
HG03521_chrY	CAT	exon	209385	209788	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000019;gene_id=HG03521_ch_G0000004;Parent=HG03521_ch_T0000019;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG03521_ch_T0000019:0;Name=LINC00685;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	209789	210444	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000019;gene_id=HG03521_ch_G0000004;Parent=HG03521_ch_T0000019;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=intron:HG03521_ch_T0000019:0;Name=LINC00685;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	210445	211570	.	+	.	source_transcript=hg002_chrY_paternal_4.1;source_transcript_name=hg002_chrY_paternal_4.1;source_gene=hg002_chrY_paternal_4;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_4;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_4.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_4.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00685;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000019;gene_id=HG03521_ch_G0000004;Parent=HG03521_ch_T0000019;transcript_name=hg002_chrY_paternal_4.1;gene_name=LINC00685;ID=exon:HG03521_ch_T0000019:1;Name=LINC00685;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	226015	277418	.	-	.	source_gene_common_name=PPP2R3B;source_gene=hg002_chrY_paternal_5;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;gene_id=HG03521_ch_G0000005;gene_biotype=protein_coding;gene_name=PPP2R3B;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000005;Name=PPP2R3B
HG03521_chrY	CAT	transcript	226015	267216	100	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03521_ch_T0000020;Name=PPP2R3B
HG03521_chrY	CAT	exon	226015	226584	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	226434	226584	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	226434	226436	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03521_ch_T0000020;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	226585	230669	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230670	230776	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230670	230776	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230777	230843	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230844	230962	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230844	230962	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230963	233024	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233025	233200	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233025	233200	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233201	233487	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233488	233577	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233488	233577	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233578	234063	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	234064	234112	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	234064	234112	.	-	2	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	234113	236590	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	236591	236747	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	236591	236747	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	236748	237261	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237262	237348	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237262	237348	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237349	237788	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237789	237863	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237789	237863	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237864	238321	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238322	238424	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238322	238424	.	-	1	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238425	238677	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238678	238781	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238678	238781	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238782	252483	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	252484	252669	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	252484	252669	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	252670	264509	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000020:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	264510	267216	.	-	.	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000020:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	264510	264749	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000020:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	264747	264749	.	-	0	source_transcript=hg002_chrY_paternal_5.1;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.1,hg002_chrY_paternal_5.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000020;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000020;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03521_ch_T0000020;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	226015	277418	100	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03521_ch_T0000021;Name=PPP2R3B
HG03521_chrY	CAT	exon	226015	226584	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	226434	226584	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	226434	226436	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03521_ch_T0000021;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	226585	230669	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230670	230776	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230670	230776	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230777	230843	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230844	230962	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230844	230962	.	-	2	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230963	233024	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233025	233200	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233025	233200	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233201	233487	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233488	233577	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233488	233577	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233578	234063	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	234064	234112	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	234064	234112	.	-	2	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	234113	236590	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	236591	236747	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	236591	236747	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	236748	237261	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237262	237348	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237262	237348	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237349	237788	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237789	237863	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237789	237863	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237864	238321	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238322	238424	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238322	238424	.	-	1	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238425	238677	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238678	238781	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238678	238781	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238782	252483	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	252484	252669	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	252484	252669	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	252670	276878	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000021:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	276879	277418	.	-	.	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000021:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	276879	277202	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000021:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	277200	277202	.	-	0	source_transcript=hg002_chrY_paternal_5.2;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.2,hg002_chrY_paternal_5.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000021;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000021;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03521_ch_T0000021;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	226320	257811	100	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03521_ch_T0000022;Name=PPP2R3B
HG03521_chrY	CAT	exon	226320	227130	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	226434	227130	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	226434	226436	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03521_ch_T0000022;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	227131	230669	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230670	230776	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230670	230776	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230777	230843	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230844	230962	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230844	230962	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230963	233024	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233025	233200	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233025	233200	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233201	233487	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233488	233577	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233488	233577	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233578	234063	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	234064	234112	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	234064	234112	.	-	2	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	234113	236590	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	236591	236747	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	236591	236747	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	236748	237261	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237262	237348	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237262	237348	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237349	237788	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237789	237863	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237789	237863	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237864	238321	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238322	238424	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238322	238424	.	-	1	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238425	238677	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238678	238781	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238678	238781	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238782	252483	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	252484	252669	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	252484	252510	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000022:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	252508	252510	.	-	0	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03521_ch_T0000022;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	252670	253333	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	253334	253411	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	253412	257259	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000022:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	257260	257811	.	-	.	source_transcript=hg002_chrY_paternal_5.3;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.3,hg002_chrY_paternal_5.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000022;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000022;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000022:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	226320	267216	100	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03521_ch_T0000023;Name=PPP2R3B
HG03521_chrY	CAT	exon	226320	227130	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	226434	227130	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	226434	226436	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03521_ch_T0000023;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	227131	230669	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230670	230776	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230670	230776	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230777	230843	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230844	230962	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230844	230962	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230963	233024	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233025	233200	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233025	233200	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233201	233487	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233488	233577	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233488	233577	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233578	234063	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	234064	234112	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	234064	234112	.	-	2	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	234113	236590	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	236591	236747	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	236591	236747	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	236748	237261	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237262	237348	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237262	237348	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237349	237788	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237789	237863	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237789	237863	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237864	238321	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238322	238424	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238322	238424	.	-	1	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238425	238677	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238678	238781	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238678	238781	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238782	252483	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	252484	252669	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	252484	252669	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	252670	264509	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000023:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	264510	267216	.	-	.	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000023:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	264510	264749	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000023:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	264747	264749	.	-	0	source_transcript=hg002_chrY_paternal_5.4;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.4,hg002_chrY_paternal_5.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000023;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000023;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03521_ch_T0000023;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	226320	277418	100	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03521_ch_T0000024;Name=PPP2R3B
HG03521_chrY	CAT	exon	226320	227130	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	226434	227130	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	226434	226436	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03521_ch_T0000024;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	227131	230669	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230670	230776	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230670	230776	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230777	230843	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230844	230962	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230844	230962	.	-	2	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230963	233024	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233025	233200	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233025	233200	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233201	233487	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233488	233577	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233488	233577	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233578	234063	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	234064	234112	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	234064	234112	.	-	2	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	234113	236590	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	236591	236747	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	236591	236747	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	236748	237261	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237262	237348	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237262	237348	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237349	237788	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237789	237863	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237789	237863	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237864	238321	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238322	238424	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238322	238424	.	-	1	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238425	238677	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238678	238781	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238678	238781	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238782	252483	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	252484	252669	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	252484	252669	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	252670	276878	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000024:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	276879	277418	.	-	.	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000024:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	276879	277202	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000024:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	277200	277202	.	-	0	source_transcript=hg002_chrY_paternal_5.5;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.5,hg002_chrY_paternal_5.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000024;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000024;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03521_ch_T0000024;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	226320	277418	100	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03521_ch_T0000025;Name=PPP2R3B
HG03521_chrY	CAT	exon	226320	227130	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	226434	227130	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	226434	226436	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03521_ch_T0000025;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	227131	230669	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230670	230776	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230670	230776	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230777	230843	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230844	230962	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230844	230962	.	-	2	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230963	233024	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233025	233200	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233025	233200	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233201	233487	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233488	233577	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233488	233577	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233578	234063	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	234064	234112	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	234064	234112	.	-	2	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	234113	236590	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	236591	236747	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	236591	236747	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	236748	237261	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237262	237348	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237262	237348	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237349	237788	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237789	237863	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237789	237863	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237864	238321	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238322	238424	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238322	238424	.	-	1	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238425	238677	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238678	238781	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238678	238781	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238782	252483	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	252484	252669	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	252484	252510	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000025:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	252508	252510	.	-	0	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03521_ch_T0000025;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	252670	253333	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	253334	253411	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	253412	276878	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000025:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	276879	277418	.	-	.	source_transcript=hg002_chrY_paternal_5.6;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.6,hg002_chrY_paternal_5.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000025;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000025;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000025:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	226320	277418	100	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03521_ch_T0000026;Name=PPP2R3B
HG03521_chrY	CAT	exon	226320	227130	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	226434	227130	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	226434	226436	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03521_ch_T0000026;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	227131	230669	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230670	230776	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230670	230776	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230777	230843	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230844	230962	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230844	230962	.	-	2	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230963	233024	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233025	233200	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233025	233200	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233201	233487	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233488	233577	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233488	233577	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233578	234063	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	234064	234112	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	234064	234112	.	-	2	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	234113	236590	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	236591	236747	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	236591	236747	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	236748	237261	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237262	237348	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237262	237348	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237349	237788	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237789	237863	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237789	237863	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237864	238321	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238322	238424	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238322	238424	.	-	1	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238425	238677	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238678	238781	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238678	238781	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238782	252483	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	252484	252669	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	252484	252510	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000026:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	252508	252510	.	-	0	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03521_ch_T0000026;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	252670	253333	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	253334	253411	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	253412	275553	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	275554	275617	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	275618	276878	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000026:13;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	276879	277418	.	-	.	source_transcript=hg002_chrY_paternal_5.7;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.7,hg002_chrY_paternal_5.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000026;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000026;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000026:14;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	227025	277418	100	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_G0000005;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=HG03521_ch_T0000027;Name=PPP2R3B
HG03521_chrY	CAT	exon	227025	228065	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	227945	228065	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	227945	227947	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=stop_codon:HG03521_ch_T0000027;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	228066	230669	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:0;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230670	230776	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230670	230776	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230777	230843	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:1;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	230844	230962	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	230844	230962	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	230963	233024	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:2;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233025	233200	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233025	233200	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233201	233487	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:3;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	233488	233577	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	233488	233577	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	233578	234063	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:4;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	234064	234112	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	234064	234112	.	-	2	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	234113	236590	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:5;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	236591	236747	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	236591	236747	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	236748	237261	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:6;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237262	237348	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237262	237348	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237349	237788	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:7;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	237789	237863	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	237789	237863	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	237864	238321	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:8;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238322	238424	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238322	238424	.	-	1	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238425	238677	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:9;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	238678	238781	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	238678	238781	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	238782	252483	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:10;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	252484	252669	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	252484	252669	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	252670	276878	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=intron:HG03521_ch_T0000027:11;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	276879	277418	.	-	.	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=exon:HG03521_ch_T0000027:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	276879	277202	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=CDS:HG03521_ch_T0000027:12;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	277200	277202	.	-	0	source_transcript=hg002_chrY_paternal_5.8;source_transcript_name=hg002_chrY_paternal_5.8;source_gene=hg002_chrY_paternal_5;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_5;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_5.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_5.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PPP2R3B;alternative_source_transcripts=hg002_chrY_paternal_5.8,hg002_chrY_paternal_5.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000027;gene_id=HG03521_ch_G0000005;Parent=HG03521_ch_T0000027;transcript_name=hg002_chrY_paternal_5.8;gene_name=PPP2R3B;ID=start_codon:HG03521_ch_T0000027;Name=PPP2R3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	321290	363780	.	+	.	source_gene_common_name=LOC102724521;source_gene=hg002_chrY_paternal_6;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;gene_id=HG03521_ch_G0000006;gene_biotype=lncRNA;gene_name=LOC102724521;gene_sources=liftoff;ID=HG03521_ch_G0000006;Name=LOC102724521
HG03521_chrY	CAT	transcript	321290	363780	1000	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG03521_ch_T0000028;Name=LOC102724521
HG03521_chrY	CAT	exon	321290	321758	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000028:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	321759	325640	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000028:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	325641	325898	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000028:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	325899	327383	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000028:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	327384	327498	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000028:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	327499	329026	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000028:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	329027	329193	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000028:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	329194	332128	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000028:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	332129	332201	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000028:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	332202	332434	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000028:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	332435	332739	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000028:5;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	332740	350099	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000028:5;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	350100	350712	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000028:6;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	350713	360544	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000028:6;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	360545	360665	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000028:7;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	360666	361738	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000028:7;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	361739	361937	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000028:8;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	361938	362540	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000028:8;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	362541	363780	.	+	.	source_transcript=hg002_chrY_paternal_6.1;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.1,hg002_chrY_paternal_6.1;transcript_id=HG03521_ch_T0000028;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000028;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000028:9;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	321534	334211	1000	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_G0000006;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=HG03521_ch_T0000029;Name=LOC102724521
HG03521_chrY	CAT	exon	321534	321758	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000029:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	321759	325640	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000029:0;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	325641	325898	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000029:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	325899	327383	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000029:1;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	327384	327498	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000029:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	327499	329026	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000029:2;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	329027	329193	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000029:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	329194	332651	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000029:3;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	332652	332739	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000029:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	332740	333526	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=intron:HG03521_ch_T0000029:4;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	333527	334211	.	+	.	source_transcript=hg002_chrY_paternal_6.2;source_transcript_name=hg002_chrY_paternal_6.1;source_gene=hg002_chrY_paternal_6;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_6;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_6.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_6.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724521;alternative_source_transcripts=hg002_chrY_paternal_6.2,hg002_chrY_paternal_6.2;transcript_id=HG03521_ch_T0000029;gene_id=HG03521_ch_G0000006;Parent=HG03521_ch_T0000029;transcript_name=hg002_chrY_paternal_6.1;gene_name=LOC102724521;ID=exon:HG03521_ch_T0000029:5;Name=LOC102724521;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	521536	556499	.	+	.	source_gene_common_name=SHOX;source_gene=hg002_chrY_paternal_9;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;gene_id=HG03521_ch_G0000007;gene_biotype=protein_coding;gene_name=SHOX;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000007;Name=SHOX
HG03521_chrY	CAT	transcript	521536	556499	100	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=HG03521_ch_T0000030;Name=SHOX
HG03521_chrY	CAT	exon	521536	521796	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000030:0;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	521797	527819	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03521_ch_T0000030:0;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	527820	528528	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000030:1;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	528252	528528	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03521_ch_T0000030:0;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	528252	528254	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:HG03521_ch_T0000030;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	528529	531971	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03521_ch_T0000030:1;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	531972	532180	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000030:2;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	531972	532180	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03521_ch_T0000030:1;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	532181	538029	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03521_ch_T0000030:2;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	538030	538087	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000030:3;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	538030	538087	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03521_ch_T0000030:2;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	538088	538207	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03521_ch_T0000030:3;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	538208	538296	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000030:4;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	538208	538296	.	+	2	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03521_ch_T0000030:3;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	538297	555873	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03521_ch_T0000030:4;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	555874	556499	.	+	.	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000030:5;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	555874	555918	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03521_ch_T0000030:4;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	555916	555918	.	+	0	source_transcript=hg002_chrY_paternal_9.1;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.1,hg002_chrY_paternal_9.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000030;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000030;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:HG03521_ch_T0000030;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	528145	548738	100	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_G0000007;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=HG03521_ch_T0000031;Name=SHOX
HG03521_chrY	CAT	exon	528145	528528	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000031:0;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	528252	528528	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03521_ch_T0000031:0;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	528252	528254	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=start_codon:HG03521_ch_T0000031;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	528529	531971	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03521_ch_T0000031:0;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	531972	532180	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000031:1;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	531972	532180	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03521_ch_T0000031:1;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	532181	538029	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03521_ch_T0000031:1;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	538030	538087	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000031:2;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	538030	538087	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03521_ch_T0000031:2;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	538088	538207	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03521_ch_T0000031:2;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	538208	538296	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000031:3;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	538208	538296	.	+	2	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03521_ch_T0000031:3;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	538297	541621	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=intron:HG03521_ch_T0000031:3;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	541622	548738	.	+	.	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=exon:HG03521_ch_T0000031:4;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	541622	541867	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=CDS:HG03521_ch_T0000031:4;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	541865	541867	.	+	0	source_transcript=hg002_chrY_paternal_9.2;source_transcript_name=hg002_chrY_paternal_9.2;source_gene=hg002_chrY_paternal_9;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_9;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_9.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_9.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SHOX;alternative_source_transcripts=hg002_chrY_paternal_9.2,hg002_chrY_paternal_9.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000031;gene_id=HG03521_ch_G0000007;Parent=HG03521_ch_T0000031;transcript_name=hg002_chrY_paternal_9.2;gene_name=SHOX;ID=stop_codon:HG03521_ch_T0000031;Name=SHOX;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1094289	1116348	.	-	.	source_gene_common_name=CRLF2;source_gene=hg002_chrY_paternal_13;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;gene_id=HG03521_ch_G0000008;gene_biotype=protein_coding;gene_name=CRLF2;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000008;Name=CRLF2
HG03521_chrY	CAT	transcript	1094289	1116348	100	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG03521_ch_T0000032;Name=CRLF2
HG03521_chrY	CAT	exon	1094289	1094959	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000032:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1094696	1094959	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000032:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1094696	1094698	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG03521_ch_T0000032;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1094960	1097005	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000032:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1097006	1097090	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000032:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1097006	1097090	.	-	1	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000032:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1097091	1100566	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000032:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1100567	1100687	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000032:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1100567	1100687	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000032:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1100688	1102508	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000032:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1102509	1102671	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000032:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1102509	1102671	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000032:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1102672	1106376	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000032:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1106377	1106510	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000032:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1106377	1106510	.	-	2	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000032:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1106511	1110406	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000032:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1110407	1110573	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000032:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1110407	1110419	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000032:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1110417	1110419	.	-	0	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG03521_ch_T0000032;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1110574	1116254	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000032:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1116255	1116348	.	-	.	source_transcript=hg002_chrY_paternal_13.1;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.1,hg002_chrY_paternal_13.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000032;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000032;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000032:6;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1094289	1116348	100	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG03521_ch_T0000033;Name=CRLF2
HG03521_chrY	CAT	exon	1094289	1094959	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000033:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1094696	1094959	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000033:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1094696	1094698	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG03521_ch_T0000033;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1094960	1097005	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000033:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1097006	1097090	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000033:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1097006	1097090	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000033:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1097091	1100566	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000033:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1100567	1100687	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000033:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1100567	1100687	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000033:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1100688	1102508	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000033:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1102509	1102671	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000033:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1102509	1102671	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000033:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1102672	1106376	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000033:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1106377	1106510	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000033:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1106377	1106510	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000033:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1106511	1110406	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000033:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1110407	1110573	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000033:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1110407	1110573	.	-	1	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000033:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1110574	1112777	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000033:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1112778	1112880	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000033:6;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1112778	1112880	.	-	2	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000033:6;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1112881	1116254	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000033:6;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1116255	1116348	.	-	.	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000033:7;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1116255	1116333	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000033:7;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1116331	1116333	.	-	0	source_transcript=hg002_chrY_paternal_13.2;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.2,hg002_chrY_paternal_13.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000033;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000033;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG03521_ch_T0000033;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1094289	1116348	100	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_G0000008;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=HG03521_ch_T0000034;Name=CRLF2
HG03521_chrY	CAT	exon	1094289	1094959	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000034:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1094696	1094959	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000034:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1094696	1094698	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=stop_codon:HG03521_ch_T0000034;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1094960	1097005	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000034:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1097006	1097090	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000034:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1097006	1097090	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000034:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1097091	1100566	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000034:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1100567	1100687	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000034:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1100567	1100687	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000034:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1100688	1102508	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000034:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1102509	1102671	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000034:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1102509	1102671	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000034:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1102672	1106376	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000034:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1106377	1106510	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000034:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1106377	1106510	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000034:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1106511	1110406	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000034:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1110407	1110573	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000034:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1110407	1110573	.	-	1	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000034:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1110574	1112777	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000034:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1112778	1112877	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000034:6;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1112778	1112877	.	-	2	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000034:6;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1112878	1116254	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=intron:HG03521_ch_T0000034:6;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1116255	1116348	.	-	.	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=exon:HG03521_ch_T0000034:7;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1116255	1116333	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=CDS:HG03521_ch_T0000034:7;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1116331	1116333	.	-	0	source_transcript=hg002_chrY_paternal_13.4;source_transcript_name=hg002_chrY_paternal_13.4;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_13.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.4,hg002_chrY_paternal_13.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000034;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000034;transcript_name=hg002_chrY_paternal_13.4;gene_name=CRLF2;ID=start_codon:HG03521_ch_T0000034;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1094289	1116348	1000	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_G0000008;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=HG03521_ch_T0000035;Name=CRLF2
HG03521_chrY	CAT	exon	1094289	1094959	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03521_ch_T0000035:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1094960	1097005	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03521_ch_T0000035:0;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1097006	1097090	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03521_ch_T0000035:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1097091	1100566	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03521_ch_T0000035:1;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1100567	1100687	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03521_ch_T0000035:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1100688	1102745	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03521_ch_T0000035:2;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1102746	1103090	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03521_ch_T0000035:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1103091	1106376	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03521_ch_T0000035:3;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1106377	1106510	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03521_ch_T0000035:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1106511	1110406	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03521_ch_T0000035:4;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1110407	1110573	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03521_ch_T0000035:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1110574	1112777	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03521_ch_T0000035:5;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1112778	1112877	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03521_ch_T0000035:6;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1112878	1116254	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=intron:HG03521_ch_T0000035:6;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1116255	1116348	.	-	.	source_transcript=hg002_chrY_paternal_13.3;source_transcript_name=hg002_chrY_paternal_13.1;source_gene=hg002_chrY_paternal_13;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_13;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_13.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_13.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CRLF2;alternative_source_transcripts=hg002_chrY_paternal_13.3,hg002_chrY_paternal_13.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000035;gene_id=HG03521_ch_G0000008;Parent=HG03521_ch_T0000035;transcript_name=hg002_chrY_paternal_13.1;gene_name=CRLF2;ID=exon:HG03521_ch_T0000035:7;Name=CRLF2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1172912	1234470	.	+	.	source_gene_common_name=CSF2RA;source_gene=hg002_chrY_paternal_14;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;gene_id=HG03521_ch_G0000009;gene_biotype=protein_coding;gene_name=CSF2RA;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000009;Name=CSF2RA
HG03521_chrY	CAT	transcript	1172912	1214700	100	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000036;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1214386	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000036:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214387	1214700	.	+	.	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000036:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214387	1214494	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000036:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1214492	1214494	.	+	0	source_transcript=hg002_chrY_paternal_14.1;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.1,hg002_chrY_paternal_14.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000036;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000036;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000036;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000037;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212021	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212022	1212123	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212022	1212123	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212124	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000037:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000037:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.10;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.10,hg002_chrY_paternal_14.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000037;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000037;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000037;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000038;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212021	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212022	1212123	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212022	1212123	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212124	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000038:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000038:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000038:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.11;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.11,hg002_chrY_paternal_14.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000038;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000038;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000038;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000039;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000039:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000039:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.12;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.12,hg002_chrY_paternal_14.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000039;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000039;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000039;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000040;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180887	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180888	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000040:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000040:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000040:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.13;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.13,hg002_chrY_paternal_14.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000040;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000040;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000040;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000041;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000041:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000041:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000041:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000041:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000041:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000041:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000041:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000041:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000041:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000041:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000041:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000041:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.14;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.14,hg002_chrY_paternal_14.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000041;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000041;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000041;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000042;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000042:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000042:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000042:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000042:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000042:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200472	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200473	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200473	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000042:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000042:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1207770	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1207771	1207833	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1207771	1207833	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000042:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1207834	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000042:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000042:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000042:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000042:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.15;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.15,hg002_chrY_paternal_14.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000042;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000042;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000042;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000043;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1176922	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1176923	1177044	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1177045	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000043:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000043:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000043:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000043:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000043:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000043:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000043:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000043:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214260	.	+	2	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000043:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1214258	1214260	.	+	0	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000043;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000043:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.16;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.16,hg002_chrY_paternal_14.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000043;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000043;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000043:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000044;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000044:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000044:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000044:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000044:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000044:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000044:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000044:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000044:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214260	.	+	2	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000044:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1214258	1214260	.	+	0	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000044;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000044:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.17;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.17,hg002_chrY_paternal_14.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000044;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000044;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000044:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000045;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000045:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000045:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000045:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000045:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000045:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000045:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000045:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000045:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214260	.	+	2	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000045:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1214258	1214260	.	+	0	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000045;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000045:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.18;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.18,hg002_chrY_paternal_14.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000045;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000045;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000045:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000046;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000046:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000046:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000046:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.19;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.19,hg002_chrY_paternal_14.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000046;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000046;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000046;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1214700	100	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000047;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1214386	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000047:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214387	1214700	.	+	.	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000047:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214387	1214494	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000047:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1214492	1214494	.	+	0	source_transcript=hg002_chrY_paternal_14.2;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.2,hg002_chrY_paternal_14.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000047;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000047;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000047;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000048;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000048:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000048:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000048:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.20;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.20,hg002_chrY_paternal_14.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000048;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000048;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000048;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1231886	100	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000049;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231685	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231686	1231704	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231686	1231704	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1231705	1231792	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231793	1231886	.	+	.	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000049:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231793	1231809	.	+	2	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000049:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231807	1231809	.	+	0	source_transcript=hg002_chrY_paternal_14.21;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.21,hg002_chrY_paternal_14.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000049;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000049;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000049;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1232063	100	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000050;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231681	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231682	1231704	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231682	1231704	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1231705	1231792	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231793	1232063	.	+	.	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000050:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231793	1231931	.	+	1	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000050:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231929	1231931	.	+	0	source_transcript=hg002_chrY_paternal_14.22;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.22,hg002_chrY_paternal_14.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000050;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000050;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000050;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1232063	100	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000051;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231681	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231682	1231704	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231682	1231704	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1231705	1231792	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000051:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231793	1232063	.	+	.	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000051:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231793	1231931	.	+	1	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000051:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231929	1231931	.	+	0	source_transcript=hg002_chrY_paternal_14.23;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.23,hg002_chrY_paternal_14.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000051;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000051;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000051;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1232063	100	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000052;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231681	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231682	1231704	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231682	1231704	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1231705	1231792	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000052:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231793	1232063	.	+	.	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000052:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231793	1231931	.	+	1	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000052:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231929	1231931	.	+	0	source_transcript=hg002_chrY_paternal_14.24;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.24,hg002_chrY_paternal_14.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000052;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000052;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000052;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1232345	100	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000053;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231685	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000053:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231686	1232345	.	+	.	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000053:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231686	1231730	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000053:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231728	1231730	.	+	0	source_transcript=hg002_chrY_paternal_14.25;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.25,hg002_chrY_paternal_14.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000053;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000053;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000053;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1232345	100	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000054;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231681	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000054:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231682	1232345	.	+	.	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000054:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231682	1231708	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000054:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231706	1231708	.	+	0	source_transcript=hg002_chrY_paternal_14.26;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.26,hg002_chrY_paternal_14.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000054;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000054;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000054;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1232345	100	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000055;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231681	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000055:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231682	1232345	.	+	.	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000055:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231682	1231708	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000055:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231706	1231708	.	+	0	source_transcript=hg002_chrY_paternal_14.27;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.27;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.27;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.27,hg002_chrY_paternal_14.27;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000055;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000055;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000055;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1232345	100	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000056;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231685	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231686	1232345	.	+	.	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000056:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231686	1231730	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000056:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231728	1231730	.	+	0	source_transcript=hg002_chrY_paternal_14.28;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.28;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.28;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.28,hg002_chrY_paternal_14.28;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000056;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000056;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000056;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1232345	100	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000057;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000057:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000057:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000057:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000057:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000057:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000057:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000057:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000057:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214260	.	+	2	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000057:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1214258	1214260	.	+	0	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000057;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231681	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000057:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231682	1232345	.	+	.	source_transcript=hg002_chrY_paternal_14.29;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.29;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.29;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.29,hg002_chrY_paternal_14.29;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000057;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000057;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000057:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000058;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000058:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000058:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000058:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000058:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000058:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000058:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000058:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000058:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000058:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000058:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218509	.	+	2	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000058:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218507	1218509	.	+	0	source_transcript=hg002_chrY_paternal_14.3;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.3,hg002_chrY_paternal_14.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000058;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000058;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000058;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1232345	100	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000059;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231685	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000059:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231686	1232345	.	+	.	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000059:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231686	1231730	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000059:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231728	1231730	.	+	0	source_transcript=hg002_chrY_paternal_14.30;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.30;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.30;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.30,hg002_chrY_paternal_14.30;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000059;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000059;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000059;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1232345	100	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000060;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000060:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000060;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000060:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000060:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000060:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000060:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000060:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000060:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000060:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214260	.	+	2	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000060:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1214258	1214260	.	+	0	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000060;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231685	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000060:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231686	1232345	.	+	.	source_transcript=hg002_chrY_paternal_14.31;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.31;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.31;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.31,hg002_chrY_paternal_14.31;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000060;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000060;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000060:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1234470	100	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000061;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000061;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1221182	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1221183	1221289	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1221183	1221251	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000061:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1221249	1221251	.	+	0	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000061;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1221290	1234279	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000061:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1234280	1234470	.	+	.	source_transcript=hg002_chrY_paternal_14.32;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.32;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.32;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.32,hg002_chrY_paternal_14.32;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000061;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000061;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000061:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1234470	100	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000062;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000062;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1234279	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1234280	1234470	.	+	.	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000062:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1234280	1234315	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000062:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1234313	1234315	.	+	0	source_transcript=hg002_chrY_paternal_14.33;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.33;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.33;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.33,hg002_chrY_paternal_14.33;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000062;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000062;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000062;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1234470	100	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000063;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000063;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1234279	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000063:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1234280	1234470	.	+	.	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000063:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1234280	1234315	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000063:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1234313	1234315	.	+	0	source_transcript=hg002_chrY_paternal_14.34;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.34;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.34;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.34,hg002_chrY_paternal_14.34;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000063;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000063;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000063;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1234470	100	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000064;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000064:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000064;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000064:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000064:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000064:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000064:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000064:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000064:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000064:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214260	.	+	2	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000064:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1214258	1214260	.	+	0	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000064;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1234279	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000064:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1234280	1234470	.	+	.	source_transcript=hg002_chrY_paternal_14.35;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.35;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.35;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.35,hg002_chrY_paternal_14.35;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000064;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000064;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000064:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1234470	100	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000065;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000065;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1234279	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000065:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1234280	1234470	.	+	.	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000065:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1234280	1234315	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000065:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1234313	1234315	.	+	0	source_transcript=hg002_chrY_paternal_14.36;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.36;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.36;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.36,hg002_chrY_paternal_14.36;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000065;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000065;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000065;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000066;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000066:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000066;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000066:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000066:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000066:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000066:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000066:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000066:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000066:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214260	.	+	2	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000066:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1214258	1214260	.	+	0	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000066;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000066:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.4;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.4,hg002_chrY_paternal_14.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000066;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000066;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000066:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000067;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000067:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000067:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000067:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000067:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000067:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000067:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000067;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000067:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000067:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000067:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000067:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000067:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000067:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000067:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000067:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000067:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000067:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000067:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000067:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000067:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000067:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214260	.	+	2	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000067:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1214258	1214260	.	+	0	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000067;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000067:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.5;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.5,hg002_chrY_paternal_14.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000067;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000067;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000067:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000068;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188559	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188560	1188711	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188712	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000068;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000068:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000068:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000068:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.7;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.7,hg002_chrY_paternal_14.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000068;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000068;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000068;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000069;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180941	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180942	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000069;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212021	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212022	1212123	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212022	1212123	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212124	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000069:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000069:13;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000069:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.8;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.8,hg002_chrY_paternal_14.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000069;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000069;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000069;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	100	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000070;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194944	1195017	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000070:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1194944	1194946	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000070;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000070:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000070:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000070:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000070:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000070:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000070:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000070:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000070:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000070:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1218322	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000070:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1218397	1218399	.	+	0	source_transcript=hg002_chrY_paternal_14.9;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.9,hg002_chrY_paternal_14.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000070;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000070;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000070;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1172912	1218855	1000	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=HG03521_ch_T0000071;Name=CSF2RA
HG03521_chrY	CAT	exon	1172912	1172977	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1172978	1180877	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1180878	1180965	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1180966	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1218321	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000071:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1218322	1218855	.	+	.	source_transcript=hg002_chrY_paternal_14.6;source_transcript_name=hg002_chrY_paternal_14.1;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_14.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.6,hg002_chrY_paternal_14.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000071;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000071;transcript_name=hg002_chrY_paternal_14.1;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000071:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1188387	1232063	100	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000072;Name=CSF2RA
HG03521_chrY	CAT	exon	1188387	1188711	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188712	1188828	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1188829	1188930	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1188855	1188930	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1188855	1188857	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000072;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1188931	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191915	1192057	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231681	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231682	1231704	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231682	1231704	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1231705	1231792	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231793	1232063	.	+	.	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000072:12;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231793	1231931	.	+	1	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000072:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231929	1231931	.	+	0	source_transcript=hg002_chrY_paternal_14.37;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.37;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.37;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.37,hg002_chrY_paternal_14.37;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000072;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000072;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000072;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1188954	1232067	100	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_G0000009;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=HG03521_ch_T0000073;Name=CSF2RA
HG03521_chrY	CAT	exon	1188954	1189193	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1189194	1191914	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1191915	1192057	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1191971	1192057	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:0;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1191971	1191973	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=start_codon:HG03521_ch_T0000073;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1192058	1194647	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194648	1194771	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194648	1194771	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:1;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1194772	1194887	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1194888	1195017	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1194888	1195017	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:2;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1195018	1196462	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1196463	1196635	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1196463	1196635	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:3;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1196636	1200453	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1200454	1200587	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1200454	1200587	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:4;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1200588	1201552	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1201553	1201582	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1201553	1201582	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:5;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1201583	1209253	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1209254	1209389	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1209254	1209389	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:6;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1209390	1212683	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1212684	1212780	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1212684	1212780	.	+	2	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:7;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1212781	1214204	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1214205	1214286	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1214205	1214286	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:8;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1214287	1231681	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231682	1231704	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231682	1231704	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:9;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1231705	1231792	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=intron:HG03521_ch_T0000073:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1231793	1232067	.	+	.	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=exon:HG03521_ch_T0000073:11;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1231793	1231931	.	+	1	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=CDS:HG03521_ch_T0000073:10;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1231929	1231931	.	+	0	source_transcript=hg002_chrY_paternal_14.38;source_transcript_name=hg002_chrY_paternal_14.38;source_gene=hg002_chrY_paternal_14;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_14;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_14.38;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_14.38;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSF2RA;alternative_source_transcripts=hg002_chrY_paternal_14.38,hg002_chrY_paternal_14.38;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000073;gene_id=HG03521_ch_G0000009;Parent=HG03521_ch_T0000073;transcript_name=hg002_chrY_paternal_14.38;gene_name=CSF2RA;ID=stop_codon:HG03521_ch_T0000073;Name=CSF2RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1199672	1199971	.	-	.	source_gene_common_name=LOC124905238;source_gene=hg002_chrY_paternal_15;gene_id=HG03521_ch_G0000010;gene_biotype=lncRNA;gene_name=LOC124905238;gene_sources=liftoff,transMap,transMap_pairwise;ID=HG03521_ch_G0000010;Name=LOC124905238
HG03521_chrY	CAT	transcript	1199672	1199971	1000	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;AdditionalSources=liftoff,transMap;transcript_id=HG03521_ch_T0000074;gene_id=HG03521_ch_G0000010;Parent=HG03521_ch_G0000010;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=HG03521_ch_T0000074;Name=LOC124905238
HG03521_chrY	CAT	exon	1199672	1199708	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;AdditionalSources=liftoff,transMap;transcript_id=HG03521_ch_T0000074;gene_id=HG03521_ch_G0000010;Parent=HG03521_ch_T0000074;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG03521_ch_T0000074:0;Name=LOC124905238;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1199709	1199968	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;AdditionalSources=liftoff,transMap;transcript_id=HG03521_ch_T0000074;gene_id=HG03521_ch_G0000010;Parent=HG03521_ch_T0000074;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=intron:HG03521_ch_T0000074:0;Name=LOC124905238;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1199969	1199971	.	-	.	source_transcript=hg002_chrY_paternal_15.1;source_transcript_name=hg002_chrY_paternal_15.1;source_gene=hg002_chrY_paternal_15;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_15;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_15.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_15.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905238;AdditionalSources=liftoff,transMap;transcript_id=HG03521_ch_T0000074;gene_id=HG03521_ch_G0000010;Parent=HG03521_ch_T0000074;transcript_name=hg002_chrY_paternal_15.1;gene_name=LOC124905238;ID=exon:HG03521_ch_T0000074:1;Name=LOC124905238;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1199741	1199772	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_16;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;gene_id=HG03521_ch_G0000011;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG03521_ch_G0000011;Name=MIR3690
HG03521_chrY	CAT	transcript	1199741	1199815	1000	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG03521_ch_T0000075;gene_id=HG03521_ch_G0000011;Parent=HG03521_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG03521_ch_T0000075;Name=MIR3690
HG03521_chrY	CAT	exon	1199741	1199815	.	+	.	source_transcript=hg002_chrY_paternal_16.1;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_16.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.1,hg002_chrY_paternal_16.1;transcript_id=HG03521_ch_T0000075;gene_id=HG03521_ch_G0000011;Parent=HG03521_ch_T0000075;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG03521_ch_T0000075:0;Name=MIR3690;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1199750	1199772	1000	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG03521_ch_T0000076;gene_id=HG03521_ch_G0000011;Parent=HG03521_ch_G0000011;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=HG03521_ch_T0000076;Name=MIR3690
HG03521_chrY	CAT	exon	1199750	1199772	.	+	.	source_transcript=hg002_chrY_paternal_16.2;source_transcript_name=hg002_chrY_paternal_16.1;source_gene=hg002_chrY_paternal_16;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_16;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_16.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_16.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_16.2,hg002_chrY_paternal_16.2;transcript_id=HG03521_ch_T0000076;gene_id=HG03521_ch_G0000011;Parent=HG03521_ch_T0000076;transcript_name=hg002_chrY_paternal_16.1;gene_name=MIR3690;ID=exon:HG03521_ch_T0000076:0;Name=MIR3690;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1200044	1200075	.	+	.	source_gene_common_name=MIR3690;source_gene=hg002_chrY_paternal_18;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_18.1;gene_id=HG03521_ch_G0000012;gene_biotype=miRNA;gene_name=MIR3690;gene_sources=liftoff;ID=HG03521_ch_G0000012;Name=MIR3690
HG03521_chrY	CAT	transcript	1200044	1200118	1000	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_18.1;transcript_id=HG03521_ch_T0000077;gene_id=HG03521_ch_G0000012;Parent=HG03521_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG03521_ch_T0000077;Name=MIR3690
HG03521_chrY	CAT	exon	1200044	1200118	.	+	.	source_transcript=hg002_chrY_paternal_18.1;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_18.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_17.1,hg002_chrY_paternal_18.1;transcript_id=HG03521_ch_T0000077;gene_id=HG03521_ch_G0000012;Parent=HG03521_ch_T0000077;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG03521_ch_T0000077:0;Name=MIR3690;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1200053	1200075	1000	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_18.2,hg002_chrY_paternal_17.2;transcript_id=HG03521_ch_T0000078;gene_id=HG03521_ch_G0000012;Parent=HG03521_ch_G0000012;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=HG03521_ch_T0000078;Name=MIR3690
HG03521_chrY	CAT	exon	1200053	1200075	.	+	.	source_transcript=hg002_chrY_paternal_18.2;source_transcript_name=hg002_chrY_paternal_18.1;source_gene=hg002_chrY_paternal_18;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_18;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_18.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_18.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR3690;alternative_source_transcripts=hg002_chrY_paternal_18.2,hg002_chrY_paternal_17.2;transcript_id=HG03521_ch_T0000078;gene_id=HG03521_ch_G0000012;Parent=HG03521_ch_T0000078;transcript_name=hg002_chrY_paternal_18.1;gene_name=MIR3690;ID=exon:HG03521_ch_T0000078:0;Name=MIR3690;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1252226	1291475	.	+	.	source_gene_common_name=IL3RA;source_gene=hg002_chrY_paternal_20;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;gene_id=HG03521_ch_G0000013;gene_biotype=protein_coding;gene_name=IL3RA;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000013;Name=IL3RA
HG03521_chrY	CAT	transcript	1252226	1291475	100	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03521_ch_T0000079;Name=IL3RA
HG03521_chrY	CAT	exon	1252226	1252367	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000079:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1252368	1257166	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000079:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1257167	1257268	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000079:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1257205	1257268	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000079:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1257205	1257207	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03521_ch_T0000079;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1257269	1267558	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000079:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267559	1267691	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000079:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267559	1267691	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000079:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267692	1267780	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000079:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267781	1267965	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000079:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267781	1267965	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000079:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267966	1271619	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000079:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1271620	1271735	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000079:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1271620	1271735	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000079:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1271736	1274263	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000079:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1274264	1274290	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000079:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1274264	1274290	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000079:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1274291	1280619	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000079:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1280620	1280734	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000079:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1280620	1280734	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000079:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1280735	1287444	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000079:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1287445	1287550	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000079:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1287445	1287550	.	+	2	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000079:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1287551	1289808	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000079:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1289809	1289890	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000079:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1289809	1289890	.	+	1	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000079:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1289891	1291176	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000079:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1291177	1291475	.	+	.	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000079:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1291177	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000079:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1291249	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.1;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.1,hg002_chrY_paternal_20.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000079;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000079;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03521_ch_T0000079;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1252226	1291475	100	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03521_ch_T0000080;Name=IL3RA
HG03521_chrY	CAT	exon	1252226	1252367	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1252368	1257166	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1257167	1257268	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1257205	1257268	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1257205	1257207	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03521_ch_T0000080;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1257269	1260755	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1260756	1260874	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1260756	1260874	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1260875	1263872	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1263873	1263987	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1263873	1263987	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1263988	1267558	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267559	1267691	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267559	1267691	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267692	1267780	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267781	1267965	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267781	1267965	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267966	1271619	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1271620	1271735	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1271620	1271735	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1271736	1274263	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1274264	1274290	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1274264	1274290	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1274291	1280619	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1280620	1280734	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1280620	1280734	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1280735	1287444	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1287445	1287550	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1287445	1287550	.	+	2	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1287551	1289808	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1289809	1289890	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1289809	1289890	.	+	1	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1289891	1291176	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000080:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1291177	1291475	.	+	.	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000080:11;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1291177	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000080:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1291249	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.2;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.2,hg002_chrY_paternal_20.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000080;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000080;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03521_ch_T0000080;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1252226	1291475	100	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03521_ch_T0000081;Name=IL3RA
HG03521_chrY	CAT	exon	1252226	1252367	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1252368	1257169	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1257170	1257268	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1257205	1257268	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1257205	1257207	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03521_ch_T0000081;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1257269	1260755	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1260756	1260874	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1260756	1260874	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1260875	1263872	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1263873	1263987	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1263873	1263987	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1263988	1267558	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267559	1267691	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267559	1267691	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267692	1267780	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267781	1267965	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267781	1267965	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267966	1271619	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1271620	1271735	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1271620	1271735	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1271736	1274263	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1274264	1274290	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1274264	1274290	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1274291	1280619	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1280620	1280734	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1280620	1280734	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1280735	1287444	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1287445	1287550	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1287445	1287550	.	+	2	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1287551	1289808	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1289809	1289890	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1289809	1289890	.	+	1	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1289891	1291176	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000081:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1291177	1291475	.	+	.	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000081:11;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1291177	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000081:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1291249	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.3;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.3,hg002_chrY_paternal_20.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000081;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000081;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03521_ch_T0000081;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1252226	1291475	100	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03521_ch_T0000082;Name=IL3RA
HG03521_chrY	CAT	exon	1252226	1252367	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1252368	1257166	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1257167	1257268	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1257205	1257268	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1257205	1257207	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03521_ch_T0000082;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1257269	1260755	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1260756	1260874	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1260756	1260874	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1260875	1263872	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1263873	1263987	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1263873	1263987	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1263988	1267558	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267559	1267691	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267559	1267691	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267692	1267783	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267784	1267965	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267784	1267965	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267966	1271619	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1271620	1271735	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1271620	1271735	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1271736	1274263	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1274264	1274290	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1274264	1274290	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1274291	1280619	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1280620	1280734	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1280620	1280734	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1280735	1287444	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1287445	1287550	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1287445	1287550	.	+	2	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1287551	1289808	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1289809	1289890	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1289809	1289890	.	+	1	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1289891	1291176	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1291177	1291475	.	+	.	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000082:11;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1291177	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000082:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1291249	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.4;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.4,hg002_chrY_paternal_20.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000082;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000082;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03521_ch_T0000082;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1252226	1291475	100	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03521_ch_T0000083;Name=IL3RA
HG03521_chrY	CAT	exon	1252226	1252367	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1252368	1257169	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1257170	1257268	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1257205	1257268	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1257205	1257207	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03521_ch_T0000083;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1257269	1260755	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1260756	1260874	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1260756	1260874	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1260875	1263872	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1263873	1263987	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1263873	1263987	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1263988	1267558	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267559	1267691	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267559	1267691	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267692	1267783	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267784	1267965	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267784	1267965	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267966	1271619	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1271620	1271735	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1271620	1271735	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1271736	1274263	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1274264	1274290	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1274264	1274290	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1274291	1280619	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1280620	1280734	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1280620	1280734	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1280735	1287444	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1287445	1287550	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1287445	1287550	.	+	2	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1287551	1289808	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1289809	1289890	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1289809	1289890	.	+	1	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1289891	1291176	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000083:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1291177	1291475	.	+	.	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000083:11;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1291177	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000083:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1291249	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.5;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.5,hg002_chrY_paternal_20.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000083;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000083;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03521_ch_T0000083;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1257021	1291475	100	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03521_ch_T0000085;Name=IL3RA
HG03521_chrY	CAT	exon	1257021	1257268	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1257025	1257268	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1257025	1257027	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03521_ch_T0000085;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1257269	1260755	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000085:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1260756	1260874	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1260756	1260874	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1260875	1263872	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000085:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1263873	1263987	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1263873	1263987	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1263988	1267558	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000085:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267559	1267691	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267559	1267691	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267692	1267780	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000085:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267781	1267965	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267781	1267965	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267966	1271619	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000085:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1271620	1271735	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1271620	1271735	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1271736	1274263	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000085:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1274264	1274290	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1274264	1274290	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1274291	1280619	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000085:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1280620	1280734	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1280620	1280734	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1280735	1287444	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000085:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1287445	1287550	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1287445	1287550	.	+	2	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1287551	1289808	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000085:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1289809	1289890	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1289809	1289890	.	+	1	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1289891	1291176	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000085:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1291177	1291475	.	+	.	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000085:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1291177	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000085:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1291249	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.6;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.6,hg002_chrY_paternal_20.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000085;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000085;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03521_ch_T0000085;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1257021	1291475	100	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_G0000013;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=HG03521_ch_T0000086;Name=IL3RA
HG03521_chrY	CAT	exon	1257021	1257268	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1257025	1257268	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1257025	1257027	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=start_codon:HG03521_ch_T0000086;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1257269	1260755	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000086:0;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1260756	1260874	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1260756	1260874	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1260875	1263872	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000086:1;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1263873	1263987	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1263873	1263987	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1263988	1267558	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000086:2;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267559	1267691	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267559	1267691	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267692	1267783	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000086:3;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267784	1267965	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1267784	1267965	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1267966	1271619	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000086:4;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1271620	1271735	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1271620	1271735	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1271736	1274263	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000086:5;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1274264	1274290	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1274264	1274290	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1274291	1280619	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000086:6;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1280620	1280734	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1280620	1280734	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1280735	1287444	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000086:7;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1287445	1287550	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1287445	1287550	.	+	2	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1287551	1289808	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000086:8;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1289809	1289890	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1289809	1289890	.	+	1	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1289891	1291176	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=intron:HG03521_ch_T0000086:9;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1291177	1291475	.	+	.	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=exon:HG03521_ch_T0000086:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1291177	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=CDS:HG03521_ch_T0000086:10;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1291249	1291251	.	+	0	source_transcript=hg002_chrY_paternal_20.7;source_transcript_name=hg002_chrY_paternal_20.7;source_gene=hg002_chrY_paternal_20;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_20;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_20.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_20.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL3RA;alternative_source_transcripts=hg002_chrY_paternal_20.7,hg002_chrY_paternal_20.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000086;gene_id=HG03521_ch_G0000013;Parent=HG03521_ch_T0000086;transcript_name=hg002_chrY_paternal_20.7;gene_name=IL3RA;ID=stop_codon:HG03521_ch_T0000086;Name=IL3RA;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1253015	1287262	.	-	.	source_gene_common_name=LOC101928032;source_gene=hg002_chrY_paternal_21;alternative_source_transcripts=hg002_chrY_paternal_21.11;gene_id=HG03521_ch_G0000014;gene_biotype=lncRNA;gene_name=LOC101928032;gene_sources=liftoff,transMap;ID=HG03521_ch_G0000014;Name=LOC101928032
HG03521_chrY	CAT	transcript	1253015	1287262	1000	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03521_ch_T0000084;Name=LOC101928032
HG03521_chrY	CAT	exon	1253015	1254230	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1254231	1257036	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000084:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1257037	1257252	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1257253	1267768	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000084:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267769	1268177	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1268178	1270970	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000084:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1270971	1271539	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1271540	1276849	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000084:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1276850	1277228	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1277229	1280584	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000084:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1280585	1280653	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1280654	1283259	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000084:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1283260	1283394	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000084:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1283395	1287107	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000084:6;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1287108	1287262	.	-	.	source_transcript=hg002_chrY_paternal_21.11;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.11;transcript_score=299.772;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.11;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000084;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000084;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000084:7;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1266225	1287262	1000	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_G0000014;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=HG03521_ch_T0000087;Name=LOC101928032
HG03521_chrY	CAT	exon	1266225	1266311	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000087:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1266312	1267768	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000087:0;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1267769	1268177	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000087:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1268178	1270970	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000087:1;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1270971	1271539	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000087:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1271540	1280584	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000087:2;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1280585	1280653	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000087:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1280654	1283259	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000087:3;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1283260	1283394	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000087:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1283395	1287107	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=intron:HG03521_ch_T0000087:4;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1287108	1287262	.	-	.	source_transcript=hg002_chrY_paternal_21.16;source_transcript_name=hg002_chrY_paternal_21.1;source_gene=hg002_chrY_paternal_21;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_21;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_21.16;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_21.16;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928032;alternative_source_transcripts=hg002_chrY_paternal_21.16;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000087;gene_id=HG03521_ch_G0000014;Parent=HG03521_ch_T0000087;transcript_name=hg002_chrY_paternal_21.1;gene_name=LOC101928032;ID=exon:HG03521_ch_T0000087:5;Name=LOC101928032;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1294938	1300899	.	-	.	source_gene_common_name=SLC25A6;source_gene=hg002_chrY_paternal_22;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;gene_id=HG03521_ch_G0000015;gene_biotype=protein_coding;gene_name=SLC25A6;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000015;Name=SLC25A6
HG03521_chrY	CAT	transcript	1294938	1300899	100	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_G0000015;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=HG03521_ch_T0000088;Name=SLC25A6
HG03521_chrY	CAT	exon	1294938	1295545	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03521_ch_T0000088:0;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1295388	1295545	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03521_ch_T0000088:0;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1295388	1295390	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=stop_codon:HG03521_ch_T0000088;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1295546	1296064	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG03521_ch_T0000088:0;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1296065	1296205	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03521_ch_T0000088:1;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1296065	1296205	.	-	2	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03521_ch_T0000088:1;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1296206	1298026	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG03521_ch_T0000088:1;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1298027	1298513	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03521_ch_T0000088:2;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1298027	1298513	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03521_ch_T0000088:2;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1298514	1300684	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=intron:HG03521_ch_T0000088:2;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1300685	1300899	.	-	.	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=exon:HG03521_ch_T0000088:3;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1300685	1300795	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=CDS:HG03521_ch_T0000088:3;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1300793	1300795	.	-	0	source_transcript=hg002_chrY_paternal_22.1;source_transcript_name=hg002_chrY_paternal_22.1;source_gene=hg002_chrY_paternal_22;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_22;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_22.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_22.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SLC25A6;alternative_source_transcripts=hg002_chrY_paternal_22.1,hg002_chrY_paternal_22.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000088;gene_id=HG03521_ch_G0000015;Parent=HG03521_ch_T0000088;transcript_name=hg002_chrY_paternal_22.1;gene_name=SLC25A6;ID=start_codon:HG03521_ch_T0000088;Name=SLC25A6;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1300779	1305667	.	+	.	source_gene_common_name=LOC105373102;source_gene=hg002_chrY_paternal_23;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;gene_id=HG03521_ch_G0000016;gene_biotype=protein_coding;gene_name=LOC105373102;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000016;Name=LOC105373102
HG03521_chrY	CAT	transcript	1300779	1305667	100	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_G0000016;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=HG03521_ch_T0000089;Name=LOC105373102
HG03521_chrY	CAT	exon	1300779	1301127	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG03521_ch_T0000089:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1300779	1301127	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG03521_ch_T0000089:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1300779	1300781	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=start_codon:HG03521_ch_T0000089;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1301128	1303915	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG03521_ch_T0000089:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1303916	1304334	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG03521_ch_T0000089:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1303916	1304334	.	+	2	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG03521_ch_T0000089:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1304335	1305157	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=intron:HG03521_ch_T0000089:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1305158	1305667	.	+	.	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=exon:HG03521_ch_T0000089:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1305158	1305178	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=CDS:HG03521_ch_T0000089:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1305176	1305178	.	+	0	source_transcript=hg002_chrY_paternal_23.1;source_transcript_name=hg002_chrY_paternal_23.2;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_23.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.1,hg002_chrY_paternal_23.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000089;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000089;transcript_name=hg002_chrY_paternal_23.2;gene_name=LOC105373102;ID=stop_codon:HG03521_ch_T0000089;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1300779	1305667	1000	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000090;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_G0000016;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=HG03521_ch_T0000090;Name=LOC105373102
HG03521_chrY	CAT	exon	1300779	1301127	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000090;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03521_ch_T0000090:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1301128	1303915	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000090;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG03521_ch_T0000090:0;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1303916	1304334	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000090;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03521_ch_T0000090:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1304335	1305157	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000090;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG03521_ch_T0000090:1;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1305158	1305301	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000090;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03521_ch_T0000090:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1305302	1305395	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000090;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=intron:HG03521_ch_T0000090:2;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1305396	1305667	.	+	.	source_transcript=hg002_chrY_paternal_23.2;source_transcript_name=hg002_chrY_paternal_23.1;source_gene=hg002_chrY_paternal_23;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_23;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_23.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_23.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105373102;alternative_source_transcripts=hg002_chrY_paternal_23.2,hg002_chrY_paternal_23.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000090;gene_id=HG03521_ch_G0000016;Parent=HG03521_ch_T0000090;transcript_name=hg002_chrY_paternal_23.1;gene_name=LOC105373102;ID=exon:HG03521_ch_T0000090:3;Name=LOC105373102;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1305811	1308198	.	+	.	source_gene_common_name=LINC00106;source_gene=hg002_chrY_paternal_24;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;gene_id=HG03521_ch_G0000017;gene_biotype=lncRNA;gene_name=LINC00106;gene_sources=liftoff;ID=HG03521_ch_G0000017;Name=LINC00106
HG03521_chrY	CAT	transcript	1305811	1308198	1000	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03521_ch_T0000091;gene_id=HG03521_ch_G0000017;Parent=HG03521_ch_G0000017;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=HG03521_ch_T0000091;Name=LINC00106
HG03521_chrY	CAT	exon	1305811	1306010	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03521_ch_T0000091;gene_id=HG03521_ch_G0000017;Parent=HG03521_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG03521_ch_T0000091:0;Name=LINC00106;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1306011	1307610	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03521_ch_T0000091;gene_id=HG03521_ch_G0000017;Parent=HG03521_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG03521_ch_T0000091:0;Name=LINC00106;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1307611	1307744	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03521_ch_T0000091;gene_id=HG03521_ch_G0000017;Parent=HG03521_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG03521_ch_T0000091:1;Name=LINC00106;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1307745	1308152	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03521_ch_T0000091;gene_id=HG03521_ch_G0000017;Parent=HG03521_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=intron:HG03521_ch_T0000091:1;Name=LINC00106;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1308153	1308198	.	+	.	source_transcript=hg002_chrY_paternal_24.1;source_transcript_name=hg002_chrY_paternal_24.1;source_gene=hg002_chrY_paternal_24;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_24;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_24.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_24.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00106;alternative_source_transcripts=hg002_chrY_paternal_24.1,hg002_chrY_paternal_24.1;transcript_id=HG03521_ch_T0000091;gene_id=HG03521_ch_G0000017;Parent=HG03521_ch_T0000091;transcript_name=hg002_chrY_paternal_24.1;gene_name=LINC00106;ID=exon:HG03521_ch_T0000091:2;Name=LINC00106;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1309317	1323576	.	+	.	source_gene_common_name=ASMTL-AS1;source_gene=hg002_chrY_paternal_25;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;gene_id=HG03521_ch_G0000018;gene_biotype=lncRNA;gene_name=ASMTL-AS1;gene_sources=liftoff;ID=HG03521_ch_G0000018;Name=ASMTL-AS1
HG03521_chrY	CAT	transcript	1309317	1321741	1000	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03521_ch_T0000092;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG03521_ch_T0000092;Name=ASMTL-AS1
HG03521_chrY	CAT	exon	1309317	1309372	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03521_ch_T0000092;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03521_ch_T0000092:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1309373	1310247	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03521_ch_T0000092;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03521_ch_T0000092:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1310248	1311011	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03521_ch_T0000092;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03521_ch_T0000092:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1311012	1312246	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03521_ch_T0000092;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03521_ch_T0000092:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1312247	1312371	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03521_ch_T0000092;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03521_ch_T0000092:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1312372	1320897	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03521_ch_T0000092;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03521_ch_T0000092:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1320898	1321741	.	+	.	source_transcript=hg002_chrY_paternal_25.1;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.1,hg002_chrY_paternal_25.1;transcript_id=HG03521_ch_T0000092;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000092;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03521_ch_T0000092:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1309317	1323576	1000	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_G0000018;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=HG03521_ch_T0000093;Name=ASMTL-AS1
HG03521_chrY	CAT	exon	1309317	1309372	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03521_ch_T0000093:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1309373	1310247	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03521_ch_T0000093:0;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1310248	1311011	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03521_ch_T0000093:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1311012	1312246	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03521_ch_T0000093:1;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1312247	1312371	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03521_ch_T0000093:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1312372	1320897	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03521_ch_T0000093:2;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1320898	1321043	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03521_ch_T0000093:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1321044	1321916	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03521_ch_T0000093:3;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1321917	1322465	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03521_ch_T0000093:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1322466	1322897	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=intron:HG03521_ch_T0000093:4;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1322898	1323576	.	+	.	source_transcript=hg002_chrY_paternal_25.2;source_transcript_name=hg002_chrY_paternal_25.1;source_gene=hg002_chrY_paternal_25;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_25;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_25.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_25.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL-AS1;alternative_source_transcripts=hg002_chrY_paternal_25.2,hg002_chrY_paternal_25.2;transcript_id=HG03521_ch_T0000093;gene_id=HG03521_ch_G0000018;Parent=HG03521_ch_T0000093;transcript_name=hg002_chrY_paternal_25.1;gene_name=ASMTL-AS1;ID=exon:HG03521_ch_T0000093:5;Name=ASMTL-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1311925	1362436	.	-	.	source_gene_common_name=ASMTL;source_gene=hg002_chrY_paternal_26;gene_id=HG03521_ch_G0000019;gene_biotype=protein_coding;gene_name=ASMTL;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG03521_ch_G0000019;Name=ASMTL
HG03521_chrY	CAT	transcript	1311925	1362436	9950	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03521_ch_T0000094;Name=ASMTL
HG03521_chrY	CAT	exon	1311925	1312275	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:0;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1312055	1312275	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:0;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1312055	1312057	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03521_ch_T0000094;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1312276	1320886	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:0;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1320887	1321009	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:1;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1320887	1321009	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:1;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1321010	1326125	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:1;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1326126	1326269	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:2;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1326126	1326269	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:2;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1326270	1327134	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:2;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1327135	1327267	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:3;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1327135	1327267	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:3;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1327268	1329810	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:3;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1329811	1329995	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:4;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1329811	1329995	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:4;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1329996	1333677	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:4;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1333678	1333840	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:5;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1333678	1333840	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:5;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1333841	1335886	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:5;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1335887	1336274	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:6;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1335887	1336274	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:6;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1336275	1340416	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:6;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1340417	1340525	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:7;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1340417	1340525	.	-	2	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:7;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1340526	1343707	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:7;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1343708	1343769	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:8;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1343708	1343769	.	-	1	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:8;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1343770	1344392	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:8;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1344393	1344457	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:9;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1344393	1344457	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:9;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1344458	1347794	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:9;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1347795	1347842	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:10;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1347795	1347842	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:10;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1347843	1350883	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:10;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1350884	1351015	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:11;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1350884	1351015	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:11;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1351016	1361445	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:11;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1361446	1361604	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:12;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1361446	1361538	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000094:12;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1361536	1361538	.	-	0	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03521_ch_T0000094;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1361605	1362315	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000094:12;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1362316	1362436	.	-	.	source_transcript=hg002_chrY_paternal_26.7;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.7;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.7;transcript_score=199.839;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000094;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000094;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000094:13;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1311925	1362436	9940	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03521_ch_T0000095;Name=ASMTL
HG03521_chrY	CAT	exon	1311925	1312275	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:0;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1312055	1312275	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:0;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1312055	1312057	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03521_ch_T0000095;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1312276	1320886	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:0;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1320887	1321009	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:1;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1320887	1321009	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:1;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1321010	1326125	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:1;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1326126	1326269	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:2;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1326126	1326269	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:2;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1326270	1327134	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:2;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1327135	1327267	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:3;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1327135	1327267	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:3;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1327268	1329810	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:3;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1329811	1329995	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:4;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1329811	1329995	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:4;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1329996	1333677	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:4;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1333678	1333840	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:5;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1333678	1333840	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:5;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1333841	1335886	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:5;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1335887	1336274	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:6;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1335887	1336274	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:6;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1336275	1340416	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:6;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1340417	1340525	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:7;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1340417	1340525	.	-	2	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:7;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1340526	1343707	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:7;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1343708	1343769	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:8;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1343708	1343769	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:8;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1343770	1347794	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:8;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1347795	1347842	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:9;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1347795	1347842	.	-	1	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:9;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1347843	1350883	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:9;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1350884	1351015	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:10;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1350884	1350945	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000095:10;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1350943	1350945	.	-	0	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03521_ch_T0000095;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1351016	1362315	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000095:10;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1362316	1362436	.	-	.	source_transcript=hg002_chrY_paternal_26.8;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.8;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.8;transcript_score=199.817;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000095;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000095;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000095:11;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1311925	1362436	9940	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_G0000019;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=HG03521_ch_T0000096;Name=ASMTL
HG03521_chrY	CAT	exon	1311925	1312275	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:0;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1312055	1312275	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:0;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1312055	1312057	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=stop_codon:HG03521_ch_T0000096;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1312276	1320886	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:0;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1320887	1321009	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:1;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1320887	1321009	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:1;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1321010	1326125	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:1;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1326126	1326269	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:2;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1326126	1326269	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:2;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1326270	1327134	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:2;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1327135	1327267	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:3;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1327135	1327267	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:3;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1327268	1329810	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:3;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1329811	1329995	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:4;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1329811	1329995	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:4;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1329996	1333677	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:4;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1333678	1333840	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:5;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1333678	1333840	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:5;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1333841	1335886	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:5;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1335887	1336274	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:6;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1335887	1336274	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:6;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1336275	1340416	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:6;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1340417	1340525	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:7;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1340417	1340525	.	-	2	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:7;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1340526	1343707	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:7;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1343708	1343769	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:8;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1343708	1343769	.	-	1	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:8;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1343770	1344392	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:8;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1344393	1344457	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:9;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1344393	1344457	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:9;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1344458	1347794	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:9;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1347795	1347842	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:10;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1347795	1347842	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:10;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1347843	1350883	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:10;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1350884	1351015	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:11;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1350884	1350934	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=CDS:HG03521_ch_T0000096:11;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1350932	1350934	.	-	0	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=start_codon:HG03521_ch_T0000096;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1351016	1362315	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=intron:HG03521_ch_T0000096:11;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1362316	1362436	.	-	.	source_transcript=hg002_chrY_paternal_26.6;source_transcript_name=hg002_chrY_paternal_26.8;source_gene=hg002_chrY_paternal_26;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_26;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_26.6;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_26.6;transcript_score=199.82299999999998;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMTL;AdditionalSources=augTM,liftoff,transMap;transcript_id=HG03521_ch_T0000096;gene_id=HG03521_ch_G0000019;Parent=HG03521_ch_T0000096;transcript_name=hg002_chrY_paternal_26.8;gene_name=ASMTL;ID=exon:HG03521_ch_T0000096:12;Name=ASMTL;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1371333	1446561	.	-	.	source_gene_common_name=P2RY8;source_gene=hg002_chrY_paternal_27;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;gene_id=HG03521_ch_G0000020;gene_biotype=protein_coding;gene_name=P2RY8;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000020;Name=P2RY8
HG03521_chrY	CAT	transcript	1371333	1376477	100	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000097;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03521_ch_T0000097;Name=P2RY8
HG03521_chrY	CAT	exon	1371333	1375332	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000097;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000097:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1374229	1375308	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000097;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03521_ch_T0000097:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1374229	1374231	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000097;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03521_ch_T0000097;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1375306	1375308	.	-	0	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000097;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03521_ch_T0000097;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1375333	1375781	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000097;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03521_ch_T0000097:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1375782	1376477	.	-	.	source_transcript=hg002_chrY_paternal_27.1;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.1,hg002_chrY_paternal_27.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000097;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000097;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000097:1;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1371333	1402276	100	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000098;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03521_ch_T0000098;Name=P2RY8
HG03521_chrY	CAT	exon	1371333	1375332	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000098;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000098:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1374229	1375308	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000098;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03521_ch_T0000098:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1374229	1374231	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000098;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03521_ch_T0000098;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1375306	1375308	.	-	0	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000098;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03521_ch_T0000098;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1375333	1402221	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000098;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03521_ch_T0000098:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1402222	1402276	.	-	.	source_transcript=hg002_chrY_paternal_27.2;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.2,hg002_chrY_paternal_27.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000098;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000098;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000098:1;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1371333	1403934	100	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000099;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03521_ch_T0000099;Name=P2RY8
HG03521_chrY	CAT	exon	1371333	1375332	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000099;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000099;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000099:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1374229	1375308	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000099;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000099;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03521_ch_T0000099:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1374229	1374231	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000099;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000099;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03521_ch_T0000099;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1375306	1375308	.	-	0	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000099;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000099;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03521_ch_T0000099;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1375333	1403317	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000099;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000099;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03521_ch_T0000099:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1403318	1403934	.	-	.	source_transcript=hg002_chrY_paternal_27.3;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.3,hg002_chrY_paternal_27.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000099;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000099;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000099:1;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1371333	1446561	100	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000100;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03521_ch_T0000100;Name=P2RY8
HG03521_chrY	CAT	exon	1371333	1375332	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000100;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000100;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000100:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1374229	1375308	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000100;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000100;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03521_ch_T0000100:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1374229	1374231	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000100;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000100;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03521_ch_T0000100;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1375306	1375308	.	-	0	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000100;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000100;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03521_ch_T0000100;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1375333	1446296	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000100;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000100;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03521_ch_T0000100:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1446297	1446561	.	-	.	source_transcript=hg002_chrY_paternal_27.4;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.4,hg002_chrY_paternal_27.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000100;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000100;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000100:1;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1371333	1446561	100	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000101;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_G0000020;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=HG03521_ch_T0000101;Name=P2RY8
HG03521_chrY	CAT	exon	1371333	1375332	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000101;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000101:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1374229	1375308	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000101;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=CDS:HG03521_ch_T0000101:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1374229	1374231	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000101;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=stop_codon:HG03521_ch_T0000101;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1375306	1375308	.	-	0	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000101;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=start_codon:HG03521_ch_T0000101;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1375333	1377256	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000101;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03521_ch_T0000101:0;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1377257	1377425	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000101;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000101:1;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1377426	1446296	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000101;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=intron:HG03521_ch_T0000101:1;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1446297	1446561	.	-	.	source_transcript=hg002_chrY_paternal_27.5;source_transcript_name=hg002_chrY_paternal_27.5;source_gene=hg002_chrY_paternal_27;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_27;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_27.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_27.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=P2RY8;alternative_source_transcripts=hg002_chrY_paternal_27.5,hg002_chrY_paternal_27.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000101;gene_id=HG03521_ch_G0000020;Parent=HG03521_ch_T0000101;transcript_name=hg002_chrY_paternal_27.5;gene_name=P2RY8;ID=exon:HG03521_ch_T0000101:2;Name=P2RY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1500624	1511446	.	+	.	source_gene_common_name=AKAP17A;source_gene=hg002_chrY_paternal_28;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;gene_id=HG03521_ch_G0000021;gene_biotype=protein_coding;gene_name=AKAP17A;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000021;Name=AKAP17A
HG03521_chrY	CAT	transcript	1500624	1511446	100	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_G0000021;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=HG03521_ch_T0000102;Name=AKAP17A
HG03521_chrY	CAT	exon	1500624	1500789	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000102:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1500790	1502463	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03521_ch_T0000102:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1502464	1503244	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000102:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1502483	1503244	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03521_ch_T0000102:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1502483	1502485	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=start_codon:HG03521_ch_T0000102;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1503245	1504375	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03521_ch_T0000102:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1504376	1504524	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000102:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1504376	1504524	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03521_ch_T0000102:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1504525	1508117	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03521_ch_T0000102:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1508118	1508358	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000102:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1508118	1508358	.	+	1	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03521_ch_T0000102:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1508359	1509584	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=intron:HG03521_ch_T0000102:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1509585	1511446	.	+	.	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000102:4;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1509585	1510520	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=CDS:HG03521_ch_T0000102:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1510518	1510520	.	+	0	source_transcript=hg002_chrY_paternal_28.1;source_transcript_name=hg002_chrY_paternal_28.2;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_28.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.1,hg002_chrY_paternal_28.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000102;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000102;transcript_name=hg002_chrY_paternal_28.2;gene_name=AKAP17A;ID=stop_codon:HG03521_ch_T0000102;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1500624	1511446	1000	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_G0000021;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=HG03521_ch_T0000103;Name=AKAP17A
HG03521_chrY	CAT	exon	1500624	1500789	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000103:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1500790	1502463	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03521_ch_T0000103:0;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1502464	1503244	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000103:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1503245	1504375	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03521_ch_T0000103:1;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1504376	1504524	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000103:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1504525	1508117	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03521_ch_T0000103:2;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1508118	1508358	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000103:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1508359	1509063	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03521_ch_T0000103:3;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1509064	1509133	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000103:4;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1509134	1509584	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=intron:HG03521_ch_T0000103:4;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1509585	1511446	.	+	.	source_transcript=hg002_chrY_paternal_28.2;source_transcript_name=hg002_chrY_paternal_28.1;source_gene=hg002_chrY_paternal_28;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_28;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_28.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_28.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AKAP17A;alternative_source_transcripts=hg002_chrY_paternal_28.2,hg002_chrY_paternal_28.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000103;gene_id=HG03521_ch_G0000021;Parent=HG03521_ch_T0000103;transcript_name=hg002_chrY_paternal_28.1;gene_name=AKAP17A;ID=exon:HG03521_ch_T0000103:5;Name=AKAP17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1504447	1547863	.	+	.	source_gene_common_name=ASMT;source_gene=hg002_chrY_paternal_29;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;gene_id=HG03521_ch_G0000022;gene_biotype=protein_coding;gene_name=ASMT;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000022;Name=ASMT
HG03521_chrY	CAT	transcript	1504447	1547863	100	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG03521_ch_T0000104;Name=ASMT
HG03521_chrY	CAT	exon	1504447	1504524	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000104:0;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1504525	1523995	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000104:0;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1523996	1524131	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000104:1;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1524063	1524131	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000104:0;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1524063	1524065	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG03521_ch_T0000104;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1524132	1532006	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000104:1;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1532007	1532181	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000104:2;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1532007	1532181	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000104:1;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1532182	1533136	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000104:2;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1533137	1533266	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000104:3;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1533137	1533266	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000104:2;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1533267	1536447	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000104:3;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1536448	1536516	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000104:4;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1536448	1536516	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000104:3;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1536517	1538556	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000104:4;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1538557	1538675	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000104:5;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1538557	1538675	.	+	1	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000104:4;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1538676	1541441	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000104:5;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1541442	1541525	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000104:6;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1541442	1541525	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000104:5;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1541526	1541886	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000104:6;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1541887	1542027	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000104:7;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1541887	1542027	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000104:6;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1542028	1545169	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000104:7;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1545170	1545292	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000104:8;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1545170	1545292	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000104:7;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1545293	1547584	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000104:8;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1547585	1547863	.	+	.	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000104:9;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1547585	1547796	.	+	2	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000104:8;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1547794	1547796	.	+	0	source_transcript=hg002_chrY_paternal_29.1;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.1,hg002_chrY_paternal_29.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000104;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000104;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG03521_ch_T0000104;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1523922	1547863	100	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG03521_ch_T0000105;Name=ASMT
HG03521_chrY	CAT	exon	1523922	1524131	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000105:0;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1524063	1524131	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000105:0;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1524063	1524065	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG03521_ch_T0000105;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1524132	1532006	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000105:0;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1532007	1532181	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000105:1;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1532007	1532181	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000105:1;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1532182	1533136	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000105:1;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1533137	1533266	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000105:2;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1533137	1533266	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000105:2;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1533267	1536447	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000105:2;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1536448	1536516	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000105:3;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1536448	1536516	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000105:3;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1536517	1538556	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000105:3;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1538557	1538675	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000105:4;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1538557	1538675	.	+	1	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000105:4;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1538676	1541441	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000105:4;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1541442	1541525	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000105:5;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1541442	1541525	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000105:5;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1541526	1541886	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000105:5;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1541887	1542027	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000105:6;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1541887	1542027	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000105:6;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1542028	1545169	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000105:6;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1545170	1545292	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000105:7;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1545170	1545292	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000105:7;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1545293	1547584	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000105:7;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1547585	1547863	.	+	.	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000105:8;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1547585	1547796	.	+	2	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000105:8;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1547794	1547796	.	+	0	source_transcript=hg002_chrY_paternal_29.2;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.2,hg002_chrY_paternal_29.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000105;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000105;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG03521_ch_T0000105;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1523996	1547863	100	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_G0000022;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=HG03521_ch_T0000106;Name=ASMT
HG03521_chrY	CAT	exon	1523996	1524131	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000106:0;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1524063	1524131	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000106:0;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	1524063	1524065	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=start_codon:HG03521_ch_T0000106;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1524132	1532006	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000106:0;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1532007	1532181	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000106:1;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1532007	1532181	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000106:1;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1532182	1533136	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000106:1;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1533137	1533266	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000106:2;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1533137	1533266	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000106:2;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1533267	1536447	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000106:2;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1536448	1536516	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000106:3;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1536448	1536516	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000106:3;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1536517	1538556	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000106:3;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1538557	1538675	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000106:4;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1538557	1538675	.	+	1	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000106:4;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1538676	1545169	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000106:4;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1545170	1545292	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000106:5;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1545170	1545292	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000106:5;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1545293	1547584	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=intron:HG03521_ch_T0000106:5;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1547585	1547863	.	+	.	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=exon:HG03521_ch_T0000106:6;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1547585	1547796	.	+	2	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=CDS:HG03521_ch_T0000106:6;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1547794	1547796	.	+	0	source_transcript=hg002_chrY_paternal_29.3;source_transcript_name=hg002_chrY_paternal_29.3;source_gene=hg002_chrY_paternal_29;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_29;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_29.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_29.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ASMT;alternative_source_transcripts=hg002_chrY_paternal_29.3,hg002_chrY_paternal_29.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000106;gene_id=HG03521_ch_G0000022;Parent=HG03521_ch_T0000106;transcript_name=hg002_chrY_paternal_29.3;gene_name=ASMT;ID=stop_codon:HG03521_ch_T0000106;Name=ASMT;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1632401	1656185	.	+	.	source_gene_common_name=LINC02968;source_gene=hg002_chrY_paternal_30;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;gene_id=HG03521_ch_G0000023;gene_biotype=lncRNA;gene_name=LINC02968;gene_sources=liftoff;ID=HG03521_ch_G0000023;Name=LINC02968
HG03521_chrY	CAT	transcript	1632401	1656185	1000	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03521_ch_T0000107;Name=LINC02968
HG03521_chrY	CAT	exon	1632401	1632705	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000107:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1632706	1633934	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000107:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1633935	1634178	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000107:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1634179	1643680	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000107:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643681	1643894	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000107:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1643895	1643987	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000107:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643988	1644775	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000107:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1644776	1647492	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000107:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1647493	1647744	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000107:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1647745	1651487	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000107:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1651488	1651547	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000107:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1651548	1655884	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000107:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1655885	1656185	.	+	.	source_transcript=hg002_chrY_paternal_30.1;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.1,hg002_chrY_paternal_30.1;transcript_id=HG03521_ch_T0000107;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000107;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000107:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1632455	1656185	1000	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03521_ch_T0000108;Name=LINC02968
HG03521_chrY	CAT	exon	1632455	1632705	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000108:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1632706	1633931	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000108:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1633932	1634193	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000108:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1634194	1642130	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000108:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1642131	1642226	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000108:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1642227	1643483	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000108:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643484	1643894	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000108:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1643895	1643987	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000108:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643988	1644775	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000108:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1644776	1647492	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000108:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1647493	1647744	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000108:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1647745	1651487	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000108:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1651488	1651547	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000108:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1651548	1655884	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000108:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1655885	1656185	.	+	.	source_transcript=hg002_chrY_paternal_30.2;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.2,hg002_chrY_paternal_30.2;transcript_id=HG03521_ch_T0000108;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000108;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000108:7;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1632538	1656185	1000	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03521_ch_T0000109;Name=LINC02968
HG03521_chrY	CAT	exon	1632538	1632705	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000109:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1632706	1633931	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000109:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1633932	1634178	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000109:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1634179	1642130	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000109:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1642131	1642226	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000109:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1642227	1643680	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000109:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643681	1643894	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000109:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1643895	1643987	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000109:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643988	1644775	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000109:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1644776	1647492	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000109:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1647493	1647744	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000109:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1647745	1651487	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000109:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1651488	1651547	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000109:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1651548	1655884	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000109:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1655885	1656185	.	+	.	source_transcript=hg002_chrY_paternal_30.3;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.3,hg002_chrY_paternal_30.3;transcript_id=HG03521_ch_T0000109;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000109;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000109:7;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1632538	1656185	1000	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03521_ch_T0000110;Name=LINC02968
HG03521_chrY	CAT	exon	1632538	1632705	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000110:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1632706	1633931	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000110:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1633932	1634178	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000110:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1634179	1642130	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000110:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1642131	1642226	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000110:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1642227	1643677	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000110:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643678	1643894	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000110:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1643895	1643987	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000110:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643988	1644775	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000110:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1644776	1647492	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000110:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1647493	1647744	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000110:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1647745	1651487	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000110:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1651488	1651547	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000110:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1651548	1655884	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000110:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1655885	1656185	.	+	.	source_transcript=hg002_chrY_paternal_30.4;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.4,hg002_chrY_paternal_30.4;transcript_id=HG03521_ch_T0000110;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000110;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000110:7;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1632538	1656185	1000	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03521_ch_T0000111;Name=LINC02968
HG03521_chrY	CAT	exon	1632538	1632705	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000111:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1632706	1633934	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000111:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1633935	1634178	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000111:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1634179	1642130	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000111:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1642131	1642226	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000111:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1642227	1643680	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000111:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643681	1643894	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000111:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1643895	1643987	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000111:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643988	1644775	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000111:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1644776	1647492	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000111:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1647493	1647744	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000111:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1647745	1651487	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000111:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1651488	1651547	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000111:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1651548	1655884	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000111:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1655885	1656185	.	+	.	source_transcript=hg002_chrY_paternal_30.5;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.5,hg002_chrY_paternal_30.5;transcript_id=HG03521_ch_T0000111;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000111;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000111:7;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1632538	1656185	1000	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_G0000023;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=HG03521_ch_T0000112;Name=LINC02968
HG03521_chrY	CAT	exon	1632538	1632705	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000112:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1632706	1633931	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000112:0;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1633932	1634178	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000112:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1634179	1642130	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000112:1;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1642131	1642226	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000112:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1642227	1643788	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000112:2;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643789	1643894	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000112:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1643895	1643987	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000112:3;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1643988	1644775	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000112:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1644776	1647492	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000112:4;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1647493	1647744	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000112:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1647745	1651487	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000112:5;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1651488	1651547	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000112:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1651548	1655884	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=intron:HG03521_ch_T0000112:6;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1655885	1656185	.	+	.	source_transcript=hg002_chrY_paternal_30.6;source_transcript_name=hg002_chrY_paternal_30.1;source_gene=hg002_chrY_paternal_30;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_30;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_30.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_30.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC02968;alternative_source_transcripts=hg002_chrY_paternal_30.6,hg002_chrY_paternal_30.6;transcript_id=HG03521_ch_T0000112;gene_id=HG03521_ch_G0000023;Parent=HG03521_ch_T0000112;transcript_name=hg002_chrY_paternal_30.1;gene_name=LINC02968;ID=exon:HG03521_ch_T0000112:7;Name=LINC02968;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1670317	1683570	.	+	.	source_gene_common_name=LOC105379413;source_gene=hg002_chrY_paternal_31;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;gene_id=HG03521_ch_G0000024;gene_biotype=lncRNA;gene_name=LOC105379413;gene_sources=liftoff;ID=HG03521_ch_G0000024;Name=LOC105379413
HG03521_chrY	CAT	transcript	1670317	1683570	1000	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03521_ch_T0000113;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG03521_ch_T0000113;Name=LOC105379413
HG03521_chrY	CAT	exon	1670317	1670893	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03521_ch_T0000113;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_T0000113;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03521_ch_T0000113:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1670894	1675340	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03521_ch_T0000113;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_T0000113;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03521_ch_T0000113:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1675341	1675554	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03521_ch_T0000113;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_T0000113;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03521_ch_T0000113:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1675555	1680442	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03521_ch_T0000113;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_T0000113;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03521_ch_T0000113:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1680443	1683570	.	+	.	source_transcript=hg002_chrY_paternal_31.1;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.1,hg002_chrY_paternal_31.1;transcript_id=HG03521_ch_T0000113;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_T0000113;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03521_ch_T0000113:2;Name=LOC105379413;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	1670317	1683570	1000	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03521_ch_T0000114;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_G0000024;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=HG03521_ch_T0000114;Name=LOC105379413
HG03521_chrY	CAT	exon	1670317	1670893	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03521_ch_T0000114;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_T0000114;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03521_ch_T0000114:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1670894	1675340	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03521_ch_T0000114;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_T0000114;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03521_ch_T0000114:0;Name=LOC105379413;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1675341	1675503	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03521_ch_T0000114;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_T0000114;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03521_ch_T0000114:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1675504	1680442	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03521_ch_T0000114;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_T0000114;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=intron:HG03521_ch_T0000114:1;Name=LOC105379413;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1680443	1683570	.	+	.	source_transcript=hg002_chrY_paternal_31.2;source_transcript_name=hg002_chrY_paternal_31.1;source_gene=hg002_chrY_paternal_31;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_31;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_31.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_31.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379413;alternative_source_transcripts=hg002_chrY_paternal_31.2,hg002_chrY_paternal_31.2;transcript_id=HG03521_ch_T0000114;gene_id=HG03521_ch_G0000024;Parent=HG03521_ch_T0000114;transcript_name=hg002_chrY_paternal_31.1;gene_name=LOC105379413;ID=exon:HG03521_ch_T0000114:2;Name=LOC105379413;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1781949	1788353	.	-	.	source_gene_common_name=LOC107985677;source_gene=hg002_chrY_paternal_32;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;gene_id=HG03521_ch_G0000025;gene_biotype=lncRNA;gene_name=LOC107985677;gene_sources=liftoff;ID=HG03521_ch_G0000025;Name=LOC107985677
HG03521_chrY	CAT	transcript	1781949	1788353	1000	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_G0000025;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=HG03521_ch_T0000115;Name=LOC107985677
HG03521_chrY	CAT	exon	1781949	1783002	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03521_ch_T0000115:0;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1783003	1784256	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03521_ch_T0000115:0;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1784257	1784370	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03521_ch_T0000115:1;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1784371	1784859	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03521_ch_T0000115:1;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1784860	1784990	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03521_ch_T0000115:2;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1784991	1786322	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03521_ch_T0000115:2;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1786323	1786638	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03521_ch_T0000115:3;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1786639	1787038	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03521_ch_T0000115:3;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1787039	1787638	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03521_ch_T0000115:4;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1787639	1788014	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=intron:HG03521_ch_T0000115:4;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1788015	1788353	.	-	.	source_transcript=hg002_chrY_paternal_32.1;source_transcript_name=hg002_chrY_paternal_32.1;source_gene=hg002_chrY_paternal_32;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_32;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_32.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_32.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107985677;alternative_source_transcripts=hg002_chrY_paternal_32.1,hg002_chrY_paternal_32.1;transcript_id=HG03521_ch_T0000115;gene_id=HG03521_ch_G0000025;Parent=HG03521_ch_T0000115;transcript_name=hg002_chrY_paternal_32.1;gene_name=LOC107985677;ID=exon:HG03521_ch_T0000115:5;Name=LOC107985677;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	1937620	2219231	.	-	.	source_gene_common_name=DHRSX;source_gene=hg002_chrY_paternal_33;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;gene_id=HG03521_ch_G0000026;gene_biotype=protein_coding;gene_name=DHRSX;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000026;Name=DHRSX
HG03521_chrY	CAT	transcript	1937620	2219231	100	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_G0000026;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=HG03521_ch_T0000116;Name=DHRSX
HG03521_chrY	CAT	exon	1937620	1939343	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03521_ch_T0000116:0;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1939155	1939343	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03521_ch_T0000116:0;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	1939155	1939157	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=stop_codon:HG03521_ch_T0000116;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1939344	1960960	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03521_ch_T0000116:0;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1960961	1961168	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03521_ch_T0000116:1;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1960961	1961168	.	-	1	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03521_ch_T0000116:1;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1961169	1984797	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03521_ch_T0000116:1;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	1984798	1985005	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03521_ch_T0000116:2;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	1984798	1985005	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03521_ch_T0000116:2;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	1985006	2004561	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03521_ch_T0000116:2;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2004562	2004663	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03521_ch_T0000116:3;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2004562	2004663	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03521_ch_T0000116:3;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2004664	2127067	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03521_ch_T0000116:3;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2127068	2127136	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03521_ch_T0000116:4;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2127068	2127136	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03521_ch_T0000116:4;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2127137	2143524	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03521_ch_T0000116:4;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2143525	2143632	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03521_ch_T0000116:5;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2143525	2143632	.	-	2	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03521_ch_T0000116:5;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2143633	2219071	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=intron:HG03521_ch_T0000116:5;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2219072	2219231	.	-	.	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=exon:HG03521_ch_T0000116:6;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2219072	2219180	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=CDS:HG03521_ch_T0000116:6;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2219178	2219180	.	-	0	source_transcript=hg002_chrY_paternal_33.1;source_transcript_name=hg002_chrY_paternal_33.1;source_gene=hg002_chrY_paternal_33;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_33;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_33.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_33.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DHRSX;alternative_source_transcripts=hg002_chrY_paternal_33.1,hg002_chrY_paternal_33.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000116;gene_id=HG03521_ch_G0000026;Parent=HG03521_ch_T0000116;transcript_name=hg002_chrY_paternal_33.1;gene_name=DHRSX;ID=start_codon:HG03521_ch_T0000116;Name=DHRSX;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2038622	2055675	.	+	.	source_gene_common_name=LOC124905239;source_gene=hg002_chrY_paternal_34;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;gene_id=HG03521_ch_G0000027;gene_biotype=lncRNA;gene_name=LOC124905239;gene_sources=liftoff;ID=HG03521_ch_G0000027;Name=LOC124905239
HG03521_chrY	CAT	transcript	2038622	2055675	1000	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03521_ch_T0000117;gene_id=HG03521_ch_G0000027;Parent=HG03521_ch_G0000027;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=HG03521_ch_T0000117;Name=LOC124905239
HG03521_chrY	CAT	exon	2038622	2039899	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03521_ch_T0000117;gene_id=HG03521_ch_G0000027;Parent=HG03521_ch_T0000117;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG03521_ch_T0000117:0;Name=LOC124905239;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2039900	2047410	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03521_ch_T0000117;gene_id=HG03521_ch_G0000027;Parent=HG03521_ch_T0000117;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG03521_ch_T0000117:0;Name=LOC124905239;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2047411	2047537	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03521_ch_T0000117;gene_id=HG03521_ch_G0000027;Parent=HG03521_ch_T0000117;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG03521_ch_T0000117:1;Name=LOC124905239;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2047538	2055508	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03521_ch_T0000117;gene_id=HG03521_ch_G0000027;Parent=HG03521_ch_T0000117;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=intron:HG03521_ch_T0000117:1;Name=LOC124905239;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2055509	2055675	.	+	.	source_transcript=hg002_chrY_paternal_34.1;source_transcript_name=hg002_chrY_paternal_34.1;source_gene=hg002_chrY_paternal_34;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_34;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_34.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_34.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905239;alternative_source_transcripts=hg002_chrY_paternal_34.1,hg002_chrY_paternal_34.1;transcript_id=HG03521_ch_T0000117;gene_id=HG03521_ch_G0000027;Parent=HG03521_ch_T0000117;transcript_name=hg002_chrY_paternal_34.1;gene_name=LOC124905239;ID=exon:HG03521_ch_T0000117:2;Name=LOC124905239;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2204692	2219231	.	-	.	source_gene_common_name=ZBED1;source_gene=hg002_chrY_paternal_35;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;gene_id=HG03521_ch_G0000028;gene_biotype=protein_coding;gene_name=ZBED1;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000028;Name=ZBED1
HG03521_chrY	CAT	transcript	2204692	2218879	100	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000118;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG03521_ch_T0000118;Name=ZBED1
HG03521_chrY	CAT	exon	2204692	2209029	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000118;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000118;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03521_ch_T0000118:0;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2206892	2208976	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000118;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000118;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG03521_ch_T0000118:0;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2206892	2206894	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000118;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000118;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG03521_ch_T0000118;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2208974	2208976	.	-	0	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000118;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000118;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG03521_ch_T0000118;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2209030	2218569	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000118;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000118;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG03521_ch_T0000118:0;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2218570	2218879	.	-	.	source_transcript=hg002_chrY_paternal_35.1;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.1,hg002_chrY_paternal_35.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000118;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000118;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03521_ch_T0000118:1;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2204692	2219231	100	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000119;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG03521_ch_T0000119;Name=ZBED1
HG03521_chrY	CAT	exon	2204692	2209029	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000119;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000119;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03521_ch_T0000119:0;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2206892	2208976	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000119;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000119;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG03521_ch_T0000119:0;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2206892	2206894	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000119;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000119;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG03521_ch_T0000119;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2208974	2208976	.	-	0	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000119;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000119;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG03521_ch_T0000119;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2209030	2219071	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000119;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000119;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG03521_ch_T0000119:0;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2219072	2219231	.	-	.	source_transcript=hg002_chrY_paternal_35.2;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.2,hg002_chrY_paternal_35.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000119;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000119;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03521_ch_T0000119:1;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2204692	2219231	100	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000120;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_G0000028;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=HG03521_ch_T0000120;Name=ZBED1
HG03521_chrY	CAT	exon	2204692	2209026	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000120;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000120;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03521_ch_T0000120:0;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2206892	2208976	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000120;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000120;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=CDS:HG03521_ch_T0000120:0;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2206892	2206894	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000120;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000120;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=stop_codon:HG03521_ch_T0000120;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2208974	2208976	.	-	0	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000120;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000120;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=start_codon:HG03521_ch_T0000120;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2209027	2219071	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000120;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000120;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=intron:HG03521_ch_T0000120:0;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2219072	2219231	.	-	.	source_transcript=hg002_chrY_paternal_35.3;source_transcript_name=hg002_chrY_paternal_35.3;source_gene=hg002_chrY_paternal_35;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_35;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_35.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_35.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZBED1;alternative_source_transcripts=hg002_chrY_paternal_35.3,hg002_chrY_paternal_35.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000120;gene_id=HG03521_ch_G0000028;Parent=HG03521_ch_T0000120;transcript_name=hg002_chrY_paternal_35.3;gene_name=ZBED1;ID=exon:HG03521_ch_T0000120:1;Name=ZBED1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2284100	2327658	.	-	.	source_gene_common_name=LOC101928092;source_gene=hg002_chrY_paternal_36;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;gene_id=HG03521_ch_G0000029;gene_biotype=lncRNA;gene_name=LOC101928092;gene_sources=liftoff;ID=HG03521_ch_G0000029;Name=LOC101928092
HG03521_chrY	CAT	transcript	2284100	2292666	1000	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03521_ch_T0000121;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03521_ch_T0000121;Name=LOC101928092
HG03521_chrY	CAT	exon	2284100	2285363	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03521_ch_T0000121;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000121:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2285364	2288080	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03521_ch_T0000121;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03521_ch_T0000121:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2288081	2288236	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03521_ch_T0000121;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000121:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2288237	2292128	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03521_ch_T0000121;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03521_ch_T0000121:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2292129	2292666	.	-	.	source_transcript=hg002_chrY_paternal_36.1;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.1,hg002_chrY_paternal_36.1;transcript_id=HG03521_ch_T0000121;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000121;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000121:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2284100	2292666	1000	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03521_ch_T0000122;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03521_ch_T0000122;Name=LOC101928092
HG03521_chrY	CAT	exon	2284100	2285363	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03521_ch_T0000122;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000122;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000122:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2285364	2288080	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03521_ch_T0000122;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000122;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03521_ch_T0000122:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2288081	2288236	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03521_ch_T0000122;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000122;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000122:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2288237	2292145	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03521_ch_T0000122;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000122;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03521_ch_T0000122:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2292146	2292666	.	-	.	source_transcript=hg002_chrY_paternal_36.2;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.2,hg002_chrY_paternal_36.2;transcript_id=HG03521_ch_T0000122;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000122;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000122:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2284100	2327590	1000	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03521_ch_T0000123;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03521_ch_T0000123;Name=LOC101928092
HG03521_chrY	CAT	exon	2284100	2285363	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03521_ch_T0000123;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000123;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000123:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2285364	2288080	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03521_ch_T0000123;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000123;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03521_ch_T0000123:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2288081	2288236	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03521_ch_T0000123;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000123;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000123:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2288237	2327523	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03521_ch_T0000123;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000123;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03521_ch_T0000123:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2327524	2327590	.	-	.	source_transcript=hg002_chrY_paternal_36.3;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.3,hg002_chrY_paternal_36.3;transcript_id=HG03521_ch_T0000123;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000123;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000123:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2284100	2327601	1000	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03521_ch_T0000124;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03521_ch_T0000124;Name=LOC101928092
HG03521_chrY	CAT	exon	2284100	2285363	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03521_ch_T0000124;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000124;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000124:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2285364	2288080	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03521_ch_T0000124;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000124;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03521_ch_T0000124:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2288081	2288236	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03521_ch_T0000124;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000124;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000124:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2288237	2292128	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03521_ch_T0000124;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000124;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03521_ch_T0000124:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2292129	2292322	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03521_ch_T0000124;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000124;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000124:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2292323	2327523	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03521_ch_T0000124;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000124;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03521_ch_T0000124:2;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2327524	2327601	.	-	.	source_transcript=hg002_chrY_paternal_36.4;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.4,hg002_chrY_paternal_36.4;transcript_id=HG03521_ch_T0000124;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000124;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000124:3;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2284100	2327658	1000	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03521_ch_T0000125;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_G0000029;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=HG03521_ch_T0000125;Name=LOC101928092
HG03521_chrY	CAT	exon	2284100	2285363	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03521_ch_T0000125;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000125;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000125:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2285364	2327523	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03521_ch_T0000125;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000125;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=intron:HG03521_ch_T0000125:0;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2327524	2327658	.	-	.	source_transcript=hg002_chrY_paternal_36.5;source_transcript_name=hg002_chrY_paternal_36.1;source_gene=hg002_chrY_paternal_36;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_36;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_36.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_36.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928092;alternative_source_transcripts=hg002_chrY_paternal_36.5,hg002_chrY_paternal_36.5;transcript_id=HG03521_ch_T0000125;gene_id=HG03521_ch_G0000029;Parent=HG03521_ch_T0000125;transcript_name=hg002_chrY_paternal_36.1;gene_name=LOC101928092;ID=exon:HG03521_ch_T0000125:1;Name=LOC101928092;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2327609	2327670	.	+	.	source_gene_common_name=MIR6089;source_gene=hg002_chrY_paternal_37;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;gene_id=HG03521_ch_G0000030;gene_biotype=miRNA;gene_name=MIR6089;gene_sources=liftoff;ID=HG03521_ch_G0000030;Name=MIR6089
HG03521_chrY	CAT	transcript	2327609	2327672	1000	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG03521_ch_T0000126;gene_id=HG03521_ch_G0000030;Parent=HG03521_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG03521_ch_T0000126;Name=MIR6089
HG03521_chrY	CAT	exon	2327609	2327672	.	+	.	source_transcript=hg002_chrY_paternal_37.1;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_37.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.1,hg002_chrY_paternal_37.1;transcript_id=HG03521_ch_T0000126;gene_id=HG03521_ch_G0000030;Parent=HG03521_ch_T0000126;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG03521_ch_T0000126:0;Name=MIR6089;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2327647	2327670	1000	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG03521_ch_T0000127;gene_id=HG03521_ch_G0000030;Parent=HG03521_ch_G0000030;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=HG03521_ch_T0000127;Name=MIR6089
HG03521_chrY	CAT	exon	2327647	2327670	.	+	.	source_transcript=hg002_chrY_paternal_37.2;source_transcript_name=hg002_chrY_paternal_37.1;source_gene=hg002_chrY_paternal_37;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_37;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_37.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_37.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR6089;alternative_source_transcripts=hg002_chrY_paternal_37.2,hg002_chrY_paternal_37.2;transcript_id=HG03521_ch_T0000127;gene_id=HG03521_ch_G0000030;Parent=HG03521_ch_T0000127;transcript_name=hg002_chrY_paternal_37.1;gene_name=MIR6089;ID=exon:HG03521_ch_T0000127:0;Name=MIR6089;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2327683	2375965	.	+	.	source_gene_common_name=CD99P1;source_gene=hg002_chrY_paternal_38;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;gene_id=HG03521_ch_G0000031;gene_biotype=transcribed_pseudogene;gene_name=CD99P1;gene_sources=liftoff;ID=HG03521_ch_G0000031;Name=CD99P1
HG03521_chrY	CAT	transcript	2327683	2357041	1000	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG03521_ch_T0000128;Name=CD99P1
HG03521_chrY	CAT	exon	2327683	2327899	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000128:0;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2327900	2329416	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000128:0;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2329417	2329459	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000128:1;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2329460	2330570	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000128:1;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2330571	2330639	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000128:2;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2330640	2334235	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000128:2;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2334236	2334389	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000128:3;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2334390	2337158	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000128:3;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2337159	2337203	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000128:4;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2337204	2337847	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000128:4;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2337848	2337916	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000128:5;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2337917	2341115	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000128:5;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2341116	2341160	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000128:6;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2341161	2341810	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000128:6;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2341811	2341879	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000128:7;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2341880	2345030	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000128:7;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2345031	2345076	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000128:8;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2345077	2356685	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000128:8;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2356686	2357041	.	+	.	source_transcript=hg002_chrY_paternal_38.1;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.1,hg002_chrY_paternal_38.1;transcript_id=HG03521_ch_T0000128;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000128;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000128:9;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2327683	2375965	1000	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_G0000031;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=HG03521_ch_T0000129;Name=CD99P1
HG03521_chrY	CAT	exon	2327683	2327899	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000129:0;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2327900	2329416	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000129:0;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2329417	2329459	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000129:1;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2329460	2330570	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000129:1;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2330571	2330639	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000129:2;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2330640	2334235	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000129:2;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2334236	2334389	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000129:3;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2334390	2337158	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000129:3;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2337159	2337203	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000129:4;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2337204	2337847	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000129:4;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2337848	2337916	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000129:5;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2337917	2341810	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000129:5;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2341811	2341879	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000129:6;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2341880	2345030	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000129:6;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2345031	2345076	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000129:7;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2345077	2373761	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=intron:HG03521_ch_T0000129:7;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2373762	2375965	.	+	.	source_transcript=hg002_chrY_paternal_38.2;source_transcript_name=hg002_chrY_paternal_38.1;source_gene=hg002_chrY_paternal_38;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_38;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_38.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_38.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99P1;alternative_source_transcripts=hg002_chrY_paternal_38.2,hg002_chrY_paternal_38.2;transcript_id=HG03521_ch_T0000129;gene_id=HG03521_ch_G0000031;Parent=HG03521_ch_T0000129;transcript_name=hg002_chrY_paternal_38.1;gene_name=CD99P1;ID=exon:HG03521_ch_T0000129:8;Name=CD99P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2331412	2333767	.	-	.	source_gene_common_name=LINC00102;source_gene=hg002_chrY_paternal_39;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;gene_id=HG03521_ch_G0000032;gene_biotype=lncRNA;gene_name=LINC00102;gene_sources=liftoff;ID=HG03521_ch_G0000032;Name=LINC00102
HG03521_chrY	CAT	transcript	2331412	2333767	1000	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03521_ch_T0000130;gene_id=HG03521_ch_G0000032;Parent=HG03521_ch_G0000032;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=HG03521_ch_T0000130;Name=LINC00102
HG03521_chrY	CAT	exon	2331412	2332117	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03521_ch_T0000130;gene_id=HG03521_ch_G0000032;Parent=HG03521_ch_T0000130;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG03521_ch_T0000130:0;Name=LINC00102;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2332118	2333136	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03521_ch_T0000130;gene_id=HG03521_ch_G0000032;Parent=HG03521_ch_T0000130;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=intron:HG03521_ch_T0000130:0;Name=LINC00102;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2333137	2333767	.	-	.	source_transcript=hg002_chrY_paternal_39.1;source_transcript_name=hg002_chrY_paternal_39.1;source_gene=hg002_chrY_paternal_39;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_39;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_39.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_39.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00102;alternative_source_transcripts=hg002_chrY_paternal_39.1,hg002_chrY_paternal_39.1;transcript_id=HG03521_ch_T0000130;gene_id=HG03521_ch_G0000032;Parent=HG03521_ch_T0000130;transcript_name=hg002_chrY_paternal_39.1;gene_name=LINC00102;ID=exon:HG03521_ch_T0000130:1;Name=LINC00102;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2410353	2460354	.	+	.	source_gene_common_name=CD99;source_gene=hg002_chrY_paternal_40;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;gene_id=HG03521_ch_G0000033;gene_biotype=protein_coding;gene_name=CD99;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000033;Name=CD99
HG03521_chrY	CAT	transcript	2410353	2455481	100	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03521_ch_T0000131;Name=CD99
HG03521_chrY	CAT	exon	2410353	2410485	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000131:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2410419	2410485	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000131:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2410419	2410421	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03521_ch_T0000131;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2410486	2433462	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000131:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2433463	2433495	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000131:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2433463	2433495	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000131:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2433496	2436645	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000131:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2436646	2436693	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000131:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2436646	2436693	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000131:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2436694	2438702	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000131:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2438703	2438747	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000131:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2438703	2438747	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000131:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2438748	2439397	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000131:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2439398	2439466	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000131:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2439398	2439466	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000131:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2439467	2441668	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000131:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2441669	2441716	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000131:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2441669	2441716	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000131:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2441717	2442355	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000131:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2442356	2442406	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000131:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2442356	2442406	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000131:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2442407	2445302	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000131:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2445303	2445416	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000131:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2445303	2445416	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000131:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2445417	2452400	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000131:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2452401	2455481	.	+	.	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000131:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2452401	2452408	.	+	2	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000131:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2452406	2452408	.	+	0	source_transcript=hg002_chrY_paternal_40.1;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.1,hg002_chrY_paternal_40.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000131;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000131;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03521_ch_T0000131;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2410353	2460354	100	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03521_ch_T0000132;Name=CD99
HG03521_chrY	CAT	exon	2410353	2410485	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000132:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2410419	2410485	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000132:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2410419	2410421	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03521_ch_T0000132;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2410486	2433462	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000132:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2433463	2433495	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000132:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2433463	2433495	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000132:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2433496	2438702	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000132:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2438703	2438747	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000132:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2438703	2438747	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000132:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2438748	2439397	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000132:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2439398	2439466	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000132:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2439398	2439466	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000132:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2439467	2441668	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000132:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2441669	2441716	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000132:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2441669	2441716	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000132:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2441717	2442355	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000132:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2442356	2442406	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000132:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2442356	2442406	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000132:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2442407	2445302	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000132:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2445303	2445416	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000132:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2445303	2445416	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000132:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2445417	2457244	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000132:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2457245	2457301	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000132:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2457245	2457301	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000132:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2457302	2459823	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000132:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2459824	2460354	.	+	.	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000132:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2459824	2459849	.	+	2	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000132:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2459847	2459849	.	+	0	source_transcript=hg002_chrY_paternal_40.2;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.2,hg002_chrY_paternal_40.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000132;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000132;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03521_ch_T0000132;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2410353	2460354	100	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03521_ch_T0000133;Name=CD99
HG03521_chrY	CAT	exon	2410353	2410485	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000133:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2410419	2410485	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000133:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2410419	2410421	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03521_ch_T0000133;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2410486	2433462	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000133:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2433463	2433495	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000133:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2433463	2433495	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000133:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2433496	2436645	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000133:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2436646	2436693	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000133:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2436646	2436693	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000133:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2436694	2438702	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000133:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2438703	2438747	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000133:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2438703	2438747	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000133:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2438748	2439397	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000133:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2439398	2439466	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000133:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2439398	2439466	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000133:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2439467	2441668	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000133:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2441669	2441716	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000133:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2441669	2441716	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000133:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2441717	2442355	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000133:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2442356	2442406	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000133:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2442356	2442406	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000133:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2442407	2445302	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000133:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2445303	2445416	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000133:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2445303	2445416	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000133:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2445417	2457247	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000133:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2457248	2457301	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000133:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2457248	2457301	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000133:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2457302	2459823	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000133:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2459824	2460354	.	+	.	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000133:9;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2459824	2459849	.	+	2	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000133:9;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2459847	2459849	.	+	0	source_transcript=hg002_chrY_paternal_40.3;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.3,hg002_chrY_paternal_40.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000133;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000133;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03521_ch_T0000133;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2410353	2460354	100	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03521_ch_T0000134;Name=CD99
HG03521_chrY	CAT	exon	2410353	2410485	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000134:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2410419	2410485	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000134:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2410419	2410421	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03521_ch_T0000134;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2410486	2433462	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000134:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2433463	2433495	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000134:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2433463	2433495	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000134:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2433496	2438702	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000134:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2438703	2438747	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000134:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2438703	2438747	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000134:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2438748	2439397	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000134:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2439398	2439466	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000134:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2439398	2439466	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000134:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2439467	2441668	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000134:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2441669	2441716	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000134:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2441669	2441716	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000134:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2441717	2442355	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000134:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2442356	2442406	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000134:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2442356	2442406	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000134:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2442407	2445302	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000134:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2445303	2445416	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000134:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2445303	2445416	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000134:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2445417	2457247	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000134:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2457248	2457301	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000134:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2457248	2457301	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000134:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2457302	2459823	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000134:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2459824	2460354	.	+	.	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000134:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2459824	2459849	.	+	2	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000134:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2459847	2459849	.	+	0	source_transcript=hg002_chrY_paternal_40.4;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.4,hg002_chrY_paternal_40.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000134;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000134;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03521_ch_T0000134;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2410353	2460354	100	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03521_ch_T0000135;Name=CD99
HG03521_chrY	CAT	exon	2410353	2410485	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000135:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2410419	2410485	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000135:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2410419	2410421	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03521_ch_T0000135;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2410486	2433462	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000135:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2433463	2433495	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000135:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2433463	2433495	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000135:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2433496	2436645	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000135:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2436646	2436693	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000135:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2436646	2436693	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000135:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2436694	2438702	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000135:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2438703	2438747	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000135:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2438703	2438747	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000135:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2438748	2439397	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000135:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2439398	2439466	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000135:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2439398	2439466	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000135:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2439467	2441668	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000135:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2441669	2441716	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000135:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2441669	2441716	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000135:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2441717	2445302	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000135:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2445303	2445416	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000135:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2445303	2445416	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000135:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2445417	2457244	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000135:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2457245	2457301	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000135:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2457245	2457301	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000135:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2457302	2459823	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000135:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2459824	2460354	.	+	.	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000135:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2459824	2459849	.	+	2	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000135:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2459847	2459849	.	+	0	source_transcript=hg002_chrY_paternal_40.5;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.5,hg002_chrY_paternal_40.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000135;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000135;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03521_ch_T0000135;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2410353	2460354	100	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_G0000033;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=HG03521_ch_T0000136;Name=CD99
HG03521_chrY	CAT	exon	2410353	2410485	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2410419	2410485	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2410419	2410421	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=start_codon:HG03521_ch_T0000136;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2410486	2433462	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000136:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2433463	2433495	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2433463	2433495	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2433496	2436645	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000136:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2436646	2436693	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2436646	2436693	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2436694	2438702	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000136:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2438703	2438747	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2438703	2438747	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2438748	2439397	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000136:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2439398	2439466	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2439398	2439466	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2439467	2441668	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000136:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2441669	2441716	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2441669	2441716	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2441717	2442355	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000136:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2442356	2442406	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2442356	2442406	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2442407	2445302	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000136:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2445303	2445416	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2445303	2445416	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2445417	2457244	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000136:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2457245	2457301	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000136:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2457245	2457301	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000136:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2457302	2459823	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=intron:HG03521_ch_T0000136:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2459824	2460354	.	+	.	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=exon:HG03521_ch_T0000136:9;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2459824	2459849	.	+	2	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=CDS:HG03521_ch_T0000136:9;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2459847	2459849	.	+	0	source_transcript=hg002_chrY_paternal_40.6;source_transcript_name=hg002_chrY_paternal_40.7;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_40.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.6,hg002_chrY_paternal_40.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000136;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000136;transcript_name=hg002_chrY_paternal_40.7;gene_name=CD99;ID=stop_codon:HG03521_ch_T0000136;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2410353	2460354	1000	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_G0000033;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=HG03521_ch_T0000137;Name=CD99
HG03521_chrY	CAT	exon	2410353	2410485	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2410486	2433462	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03521_ch_T0000137:0;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2433463	2433495	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2433496	2436645	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03521_ch_T0000137:1;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2436646	2436693	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2436694	2438702	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03521_ch_T0000137:2;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2438703	2438747	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2438748	2439397	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03521_ch_T0000137:3;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2439398	2439466	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2439467	2441668	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03521_ch_T0000137:4;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2441669	2441716	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2441717	2442355	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03521_ch_T0000137:5;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2442356	2442406	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2442407	2445302	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03521_ch_T0000137:6;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2445303	2445416	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2445417	2452400	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03521_ch_T0000137:7;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2452401	2452418	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2452419	2457247	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03521_ch_T0000137:8;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2457248	2457301	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:9;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2457302	2459823	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=intron:HG03521_ch_T0000137:9;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2459824	2460354	.	+	.	source_transcript=hg002_chrY_paternal_40.7;source_transcript_name=hg002_chrY_paternal_40.1;source_gene=hg002_chrY_paternal_40;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_40;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_40.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_40.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CD99;alternative_source_transcripts=hg002_chrY_paternal_40.7,hg002_chrY_paternal_40.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000137;gene_id=HG03521_ch_G0000033;Parent=HG03521_ch_T0000137;transcript_name=hg002_chrY_paternal_40.1;gene_name=CD99;ID=exon:HG03521_ch_T0000137:10;Name=CD99;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2471363	2493943	.	+	.	source_gene_common_name=XGY2;source_gene=hg002_chrY_paternal_41;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;gene_id=HG03521_ch_G0000034;gene_biotype=transcribed_pseudogene;gene_name=XGY2;gene_sources=liftoff;ID=HG03521_ch_G0000034;Name=XGY2
HG03521_chrY	CAT	transcript	2471363	2493943	1000	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03521_ch_T0000138;gene_id=HG03521_ch_G0000034;Parent=HG03521_ch_G0000034;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=HG03521_ch_T0000138;Name=XGY2
HG03521_chrY	CAT	exon	2471363	2471402	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03521_ch_T0000138;gene_id=HG03521_ch_G0000034;Parent=HG03521_ch_T0000138;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG03521_ch_T0000138:0;Name=XGY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2471403	2489608	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03521_ch_T0000138;gene_id=HG03521_ch_G0000034;Parent=HG03521_ch_T0000138;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG03521_ch_T0000138:0;Name=XGY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2489609	2489650	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03521_ch_T0000138;gene_id=HG03521_ch_G0000034;Parent=HG03521_ch_T0000138;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG03521_ch_T0000138:1;Name=XGY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2489651	2493662	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03521_ch_T0000138;gene_id=HG03521_ch_G0000034;Parent=HG03521_ch_T0000138;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=intron:HG03521_ch_T0000138:1;Name=XGY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2493663	2493943	.	+	.	source_transcript=hg002_chrY_paternal_41.1;source_transcript_name=hg002_chrY_paternal_41.1;source_gene=hg002_chrY_paternal_41;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_41;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_41.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_41.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XGY2;alternative_source_transcripts=hg002_chrY_paternal_41.1,hg002_chrY_paternal_41.1;transcript_id=HG03521_ch_T0000138;gene_id=HG03521_ch_G0000034;Parent=HG03521_ch_T0000138;transcript_name=hg002_chrY_paternal_41.1;gene_name=XGY2;ID=exon:HG03521_ch_T0000138:2;Name=XGY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2505792	2506619	.	-	.	source_gene_common_name=SRY;source_gene=hg002_chrY_paternal_43;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;gene_id=HG03521_ch_G0000035;gene_biotype=protein_coding;gene_name=SRY;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000035;Name=SRY
HG03521_chrY	CAT	transcript	2505792	2506619	100	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000139;gene_id=HG03521_ch_G0000035;Parent=HG03521_ch_G0000035;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=HG03521_ch_T0000139;Name=SRY
HG03521_chrY	CAT	exon	2505792	2506619	.	-	.	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000139;gene_id=HG03521_ch_G0000035;Parent=HG03521_ch_T0000139;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=exon:HG03521_ch_T0000139:0;Name=SRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2505926	2506540	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000139;gene_id=HG03521_ch_G0000035;Parent=HG03521_ch_T0000139;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=CDS:HG03521_ch_T0000139:0;Name=SRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2505926	2505928	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000139;gene_id=HG03521_ch_G0000035;Parent=HG03521_ch_T0000139;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=stop_codon:HG03521_ch_T0000139;Name=SRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2506538	2506540	.	-	0	source_transcript=hg002_chrY_paternal_43.1;source_transcript_name=hg002_chrY_paternal_43.1;source_gene=hg002_chrY_paternal_43;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_43;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_43.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_43.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SRY;alternative_source_transcripts=hg002_chrY_paternal_43.1,hg002_chrY_paternal_43.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000139;gene_id=HG03521_ch_G0000035;Parent=HG03521_ch_T0000139;transcript_name=hg002_chrY_paternal_43.1;gene_name=SRY;ID=start_codon:HG03521_ch_T0000139;Name=SRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2560526	2586192	.	+	.	source_gene_common_name=RPS4Y1;source_gene=hg002_chrY_paternal_46;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;gene_id=HG03521_ch_G0000036;gene_biotype=protein_coding;gene_name=RPS4Y1;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000036;Name=RPS4Y1
HG03521_chrY	CAT	transcript	2560526	2586192	100	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG03521_ch_T0000140;Name=RPS4Y1
HG03521_chrY	CAT	exon	2560526	2560551	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000140:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2560549	2560551	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000140:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2560549	2560551	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG03521_ch_T0000140;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2560552	2561088	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000140:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2561089	2561166	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000140:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2561089	2561166	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000140:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2561167	2563000	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000140:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2563001	2563181	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000140:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2563001	2563181	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000140:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2563182	2564569	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000140:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2564570	2564667	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000140:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2564570	2564667	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000140:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2564668	2573523	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000140:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2573524	2573695	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000140:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2573524	2573695	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000140:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2573696	2584011	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000140:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2584012	2584169	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000140:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2584012	2584169	.	+	2	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000140:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2584170	2585716	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000140:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2585717	2586192	.	+	.	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000140:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2585717	2585818	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000140:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2585816	2585818	.	+	0	source_transcript=hg002_chrY_paternal_46.1;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.1,hg002_chrY_paternal_46.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000140;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000140;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG03521_ch_T0000140;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2560526	2586192	100	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_G0000036;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=HG03521_ch_T0000141;Name=RPS4Y1
HG03521_chrY	CAT	exon	2560526	2560897	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000141:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2560868	2560897	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000141:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2560868	2560870	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=start_codon:HG03521_ch_T0000141;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2560898	2561088	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000141:0;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2561089	2561166	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000141:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2561089	2561166	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000141:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2561167	2563000	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000141:1;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2563001	2563181	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000141:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2563001	2563181	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000141:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2563182	2564569	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000141:2;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2564570	2564667	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000141:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2564570	2564667	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000141:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2564668	2573523	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000141:3;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2573524	2573695	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000141:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2573524	2573695	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000141:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2573696	2584011	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000141:4;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2584012	2584169	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000141:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2584012	2584169	.	+	2	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000141:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2584170	2585716	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=intron:HG03521_ch_T0000141:5;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2585717	2586192	.	+	.	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=exon:HG03521_ch_T0000141:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2585717	2585818	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=CDS:HG03521_ch_T0000141:6;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2585816	2585818	.	+	0	source_transcript=hg002_chrY_paternal_46.2;source_transcript_name=hg002_chrY_paternal_46.2;source_gene=hg002_chrY_paternal_46;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_46;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_46.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_46.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y1;alternative_source_transcripts=hg002_chrY_paternal_46.2,hg002_chrY_paternal_46.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000141;gene_id=HG03521_ch_G0000036;Parent=HG03521_ch_T0000141;transcript_name=hg002_chrY_paternal_46.2;gene_name=RPS4Y1;ID=stop_codon:HG03521_ch_T0000141;Name=RPS4Y1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2654658	2701769	.	+	.	source_gene_common_name=ZFY;source_gene=hg002_chrY_paternal_49;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;gene_id=HG03521_ch_G0000037;gene_biotype=protein_coding;gene_name=ZFY;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000037;Name=ZFY
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000142;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2655046	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2655047	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680355	2680910	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000142:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2680355	2680357	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000142;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000142:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000142:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000142:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000142:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000142:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000142:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000142:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.1;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.1,hg002_chrY_paternal_49.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000142;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000142;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000142;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000143;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2654723	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2654724	2673172	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2673173	2673261	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2673201	2673261	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000143:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2673201	2673203	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000143;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2673262	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000143:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000143:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2695932	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2695933	2696085	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2695933	2696085	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000143:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2696086	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000143:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000143:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000143:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.10;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.10,hg002_chrY_paternal_49.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000143;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000143;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000143;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000144;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2654723	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2654724	2673172	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2673173	2673261	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2673201	2673261	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000144:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2673201	2673203	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000144;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2673262	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680338	2680910	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000144:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000144:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000144:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2695932	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2695933	2696085	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2695933	2696085	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000144:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2696086	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000144:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000144:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000144:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000144:7;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000144:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.11;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.11,hg002_chrY_paternal_49.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000144;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000144;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000144;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000145;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2655046	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000145:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2655047	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000145:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000145:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680355	2680910	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000145:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2680355	2680357	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000145;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000145:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000145:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000145:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000145:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000145:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000145:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2695932	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000145:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2695933	2696085	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000145:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2695933	2696085	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000145:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2696086	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000145:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000145:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000145:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000145:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000145:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000145:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.12;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.12,hg002_chrY_paternal_49.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000145;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000145;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000145;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000146;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2654723	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000146:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2654724	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000146:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000146:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680355	2680910	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000146:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2680355	2680357	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000146;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000146:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000146:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000146:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000146:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000146:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000146:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2695932	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000146:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2695933	2696085	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000146:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2695933	2696085	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000146:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2696086	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000146:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000146:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000146:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000146:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000146:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000146:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.13;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.13,hg002_chrY_paternal_49.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000146;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000146;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000146;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000147;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2654912	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2654913	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680355	2680910	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000147:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2680355	2680357	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000147;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000147:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000147:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2695932	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2695933	2696085	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2695933	2696085	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000147:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2696086	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000147:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000147:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000147:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000147:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000147:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.2;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.2,hg002_chrY_paternal_49.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000147;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000147;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000147;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000148;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2655046	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2655047	2673172	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2673173	2673261	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2673201	2673261	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000148:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2673201	2673203	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000148;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2673262	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680338	2680910	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000148:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000148:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000148:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000148:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000148:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000148:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.3;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.3,hg002_chrY_paternal_49.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000148;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000148;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000148;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000149;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2654723	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2654724	2673172	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2673173	2673261	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2673201	2673261	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000149:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2673201	2673203	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000149;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2673262	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680338	2680910	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000149:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000149:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000149:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000149:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000149:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000149:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.4;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.4,hg002_chrY_paternal_49.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000149;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000149;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000149;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000150;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2654723	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2654724	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680355	2680910	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000150:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2680355	2680357	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000150;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000150:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000150:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000150:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000150:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000150:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.5;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.5,hg002_chrY_paternal_49.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000150;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000150;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000150;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000151;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2654723	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2654724	2673172	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2673173	2673261	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2673201	2673261	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000151:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2673201	2673203	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000151;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2673262	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000151:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000151:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000151:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000151:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000151:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.6;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.6,hg002_chrY_paternal_49.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000151;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000151;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000151;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000152;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2655046	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2655047	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694423	2694507	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000152:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2694423	2694425	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000152;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000152:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000152:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000152:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000152:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.7;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.7,hg002_chrY_paternal_49.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000152;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000152;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000152;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000153;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2655046	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2655047	2673172	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2673173	2673261	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2673201	2673261	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000153:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2673201	2673203	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000153;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2673262	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680338	2680910	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000153:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000153:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000153:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2695932	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2695933	2696085	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2695933	2696085	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000153:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2696086	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000153:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000153:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000153:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000153:7;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000153:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.8;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.8,hg002_chrY_paternal_49.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000153;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000153;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000153;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2654658	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000154;Name=ZFY
HG03521_chrY	CAT	exon	2654658	2654912	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2654913	2673172	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2673173	2673261	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2673201	2673261	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000154:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2673201	2673203	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000154;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2673262	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680338	2680910	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000154:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000154:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000154:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2695932	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2695933	2696085	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2695933	2696085	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000154:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2696086	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000154:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000154:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000154:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000154:7;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000154:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.9;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.9,hg002_chrY_paternal_49.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000154;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000154;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000154;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	2665446	2701769	100	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_G0000037;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=HG03521_ch_T0000155;Name=ZFY
HG03521_chrY	CAT	exon	2665446	2665543	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2665544	2673172	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2673173	2673261	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2673201	2673261	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000155:0;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	2673201	2673203	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=start_codon:HG03521_ch_T0000155;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2673262	2680337	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2680338	2680910	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2680338	2680910	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000155:1;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2680911	2694357	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694358	2694507	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694358	2694507	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000155:2;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694508	2694773	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2694774	2694917	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2694774	2694917	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000155:3;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2694918	2695932	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2695933	2696085	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000155:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2695933	2696085	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000155:4;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2696086	2697202	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000155:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2697203	2697343	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000155:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2697203	2697343	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000155:5;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2697344	2698072	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=intron:HG03521_ch_T0000155:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2698073	2701769	.	+	.	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=exon:HG03521_ch_T0000155:7;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	2698073	2699256	.	+	2	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=CDS:HG03521_ch_T0000155:6;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	2699254	2699256	.	+	0	source_transcript=hg002_chrY_paternal_49.14;source_transcript_name=hg002_chrY_paternal_49.14;source_gene=hg002_chrY_paternal_49;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_49;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_49.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_49.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY;alternative_source_transcripts=hg002_chrY_paternal_49.14,hg002_chrY_paternal_49.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000155;gene_id=HG03521_ch_G0000037;Parent=HG03521_ch_T0000155;transcript_name=hg002_chrY_paternal_49.14;gene_name=ZFY;ID=stop_codon:HG03521_ch_T0000155;Name=ZFY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2686083	2721888	.	-	.	source_gene_common_name=ZFY-AS1;source_gene=hg002_chrY_paternal_50;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;gene_id=HG03521_ch_G0000038;gene_biotype=lncRNA;gene_name=ZFY-AS1;gene_sources=liftoff;ID=HG03521_ch_G0000038;Name=ZFY-AS1
HG03521_chrY	CAT	transcript	2686083	2721888	1000	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03521_ch_T0000156;gene_id=HG03521_ch_G0000038;Parent=HG03521_ch_G0000038;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=HG03521_ch_T0000156;Name=ZFY-AS1
HG03521_chrY	CAT	exon	2686083	2686202	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03521_ch_T0000156;gene_id=HG03521_ch_G0000038;Parent=HG03521_ch_T0000156;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG03521_ch_T0000156:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2686203	2701100	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03521_ch_T0000156;gene_id=HG03521_ch_G0000038;Parent=HG03521_ch_T0000156;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG03521_ch_T0000156:0;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2701101	2701190	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03521_ch_T0000156;gene_id=HG03521_ch_G0000038;Parent=HG03521_ch_T0000156;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG03521_ch_T0000156:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2701191	2721574	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03521_ch_T0000156;gene_id=HG03521_ch_G0000038;Parent=HG03521_ch_T0000156;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=intron:HG03521_ch_T0000156:1;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2721575	2721888	.	-	.	source_transcript=hg002_chrY_paternal_50.1;source_transcript_name=hg002_chrY_paternal_50.1;source_gene=hg002_chrY_paternal_50;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_50;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_50.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_50.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=ZFY-AS1;alternative_source_transcripts=hg002_chrY_paternal_50.1,hg002_chrY_paternal_50.1;transcript_id=HG03521_ch_T0000156;gene_id=HG03521_ch_G0000038;Parent=HG03521_ch_T0000156;transcript_name=hg002_chrY_paternal_50.1;gene_name=ZFY-AS1;ID=exon:HG03521_ch_T0000156:2;Name=ZFY-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	2722258	2821534	.	+	.	source_gene_common_name=LINC00278;source_gene=hg002_chrY_paternal_52;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;gene_id=HG03521_ch_G0000039;gene_biotype=lncRNA;gene_name=LINC00278;gene_sources=liftoff;ID=HG03521_ch_G0000039;Name=LINC00278
HG03521_chrY	CAT	transcript	2722258	2821534	1000	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03521_ch_T0000157;gene_id=HG03521_ch_G0000039;Parent=HG03521_ch_G0000039;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=HG03521_ch_T0000157;Name=LINC00278
HG03521_chrY	CAT	exon	2722258	2722479	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03521_ch_T0000157;gene_id=HG03521_ch_G0000039;Parent=HG03521_ch_T0000157;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03521_ch_T0000157:0;Name=LINC00278;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2722480	2798545	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03521_ch_T0000157;gene_id=HG03521_ch_G0000039;Parent=HG03521_ch_T0000157;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG03521_ch_T0000157:0;Name=LINC00278;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2798546	2798603	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03521_ch_T0000157;gene_id=HG03521_ch_G0000039;Parent=HG03521_ch_T0000157;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03521_ch_T0000157:1;Name=LINC00278;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2798604	2816255	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03521_ch_T0000157;gene_id=HG03521_ch_G0000039;Parent=HG03521_ch_T0000157;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG03521_ch_T0000157:1;Name=LINC00278;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2816256	2816317	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03521_ch_T0000157;gene_id=HG03521_ch_G0000039;Parent=HG03521_ch_T0000157;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03521_ch_T0000157:2;Name=LINC00278;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	2816318	2821346	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03521_ch_T0000157;gene_id=HG03521_ch_G0000039;Parent=HG03521_ch_T0000157;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=intron:HG03521_ch_T0000157:2;Name=LINC00278;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	2821347	2821534	.	+	.	source_transcript=hg002_chrY_paternal_52.1;source_transcript_name=hg002_chrY_paternal_52.1;source_gene=hg002_chrY_paternal_52;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_52;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_52.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_52.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00278;alternative_source_transcripts=hg002_chrY_paternal_52.1,hg002_chrY_paternal_52.1;transcript_id=HG03521_ch_T0000157;gene_id=HG03521_ch_G0000039;Parent=HG03521_ch_T0000157;transcript_name=hg002_chrY_paternal_52.1;gene_name=LINC00278;ID=exon:HG03521_ch_T0000157:3;Name=LINC00278;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	3298351	3299325	.	+	.	source_gene_common_name=TGIF2LY;source_gene=hg002_chrY_paternal_55;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;gene_id=HG03521_ch_G0000040;gene_biotype=protein_coding;gene_name=TGIF2LY;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000040;Name=TGIF2LY
HG03521_chrY	CAT	transcript	3298351	3299325	100	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000158;gene_id=HG03521_ch_G0000040;Parent=HG03521_ch_G0000040;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=HG03521_ch_T0000158;Name=TGIF2LY
HG03521_chrY	CAT	exon	3298351	3298411	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000158;gene_id=HG03521_ch_G0000040;Parent=HG03521_ch_T0000158;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG03521_ch_T0000158:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	3298412	3298507	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000158;gene_id=HG03521_ch_G0000040;Parent=HG03521_ch_T0000158;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=intron:HG03521_ch_T0000158:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	3298508	3299325	.	+	.	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000158;gene_id=HG03521_ch_G0000040;Parent=HG03521_ch_T0000158;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=exon:HG03521_ch_T0000158:1;Name=TGIF2LY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	3298529	3299086	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000158;gene_id=HG03521_ch_G0000040;Parent=HG03521_ch_T0000158;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=CDS:HG03521_ch_T0000158:0;Name=TGIF2LY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	3298529	3298531	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000158;gene_id=HG03521_ch_G0000040;Parent=HG03521_ch_T0000158;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=start_codon:HG03521_ch_T0000158;Name=TGIF2LY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	3299084	3299086	.	+	0	source_transcript=hg002_chrY_paternal_55.1;source_transcript_name=hg002_chrY_paternal_55.1;source_gene=hg002_chrY_paternal_55;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_55;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_55.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_55.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TGIF2LY;alternative_source_transcripts=hg002_chrY_paternal_55.1,hg002_chrY_paternal_55.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000158;gene_id=HG03521_ch_G0000040;Parent=HG03521_ch_T0000158;transcript_name=hg002_chrY_paternal_55.1;gene_name=TGIF2LY;ID=stop_codon:HG03521_ch_T0000158;Name=TGIF2LY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	3519986	3554887	.	+	.	source_gene_common_name=LOC105377227;source_gene=hg002_chrY_paternal_58;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;gene_id=HG03521_ch_G0000041;gene_biotype=lncRNA;gene_name=LOC105377227;gene_sources=liftoff;ID=HG03521_ch_G0000041;Name=LOC105377227
HG03521_chrY	CAT	transcript	3519986	3530993	1000	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03521_ch_T0000159;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG03521_ch_T0000159;Name=LOC105377227
HG03521_chrY	CAT	exon	3519986	3523287	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03521_ch_T0000159;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000159;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03521_ch_T0000159:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	3523288	3523719	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03521_ch_T0000159;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000159;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03521_ch_T0000159:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	3523720	3523831	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03521_ch_T0000159;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000159;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03521_ch_T0000159:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	3523832	3528903	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03521_ch_T0000159;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000159;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03521_ch_T0000159:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	3528904	3530993	.	+	.	source_transcript=hg002_chrY_paternal_58.1;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.1,hg002_chrY_paternal_58.1;transcript_id=HG03521_ch_T0000159;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000159;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03521_ch_T0000159:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	3519986	3552365	1000	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03521_ch_T0000160;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG03521_ch_T0000160;Name=LOC105377227
HG03521_chrY	CAT	exon	3519986	3523287	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03521_ch_T0000160;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000160;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03521_ch_T0000160:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	3523288	3523719	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03521_ch_T0000160;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000160;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03521_ch_T0000160:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	3523720	3523831	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03521_ch_T0000160;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000160;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03521_ch_T0000160:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	3523832	3528903	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03521_ch_T0000160;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000160;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03521_ch_T0000160:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	3528904	3529078	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03521_ch_T0000160;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000160;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03521_ch_T0000160:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	3529079	3551735	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03521_ch_T0000160;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000160;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03521_ch_T0000160:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	3551736	3552365	.	+	.	source_transcript=hg002_chrY_paternal_58.2;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.2,hg002_chrY_paternal_58.2;transcript_id=HG03521_ch_T0000160;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000160;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03521_ch_T0000160:3;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	3519986	3554887	1000	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03521_ch_T0000161;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_G0000041;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=HG03521_ch_T0000161;Name=LOC105377227
HG03521_chrY	CAT	exon	3519986	3523287	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03521_ch_T0000161;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000161;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03521_ch_T0000161:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	3523288	3523719	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03521_ch_T0000161;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000161;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03521_ch_T0000161:0;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	3523720	3523831	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03521_ch_T0000161;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000161;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03521_ch_T0000161:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	3523832	3554792	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03521_ch_T0000161;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000161;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=intron:HG03521_ch_T0000161:1;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	3554793	3554887	.	+	.	source_transcript=hg002_chrY_paternal_58.3;source_transcript_name=hg002_chrY_paternal_58.1;source_gene=hg002_chrY_paternal_58;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_58;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_58.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_58.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377227;alternative_source_transcripts=hg002_chrY_paternal_58.3,hg002_chrY_paternal_58.3;transcript_id=HG03521_ch_T0000161;gene_id=HG03521_ch_G0000041;Parent=HG03521_ch_T0000161;transcript_name=hg002_chrY_paternal_58.1;gene_name=LOC105377227;ID=exon:HG03521_ch_T0000161:2;Name=LOC105377227;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	4327681	4327719	.	+	.	source_gene_common_name=MIR9985;source_gene=hg002_chrY_paternal_62;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;gene_id=HG03521_ch_G0000042;gene_biotype=miRNA;gene_name=MIR9985;gene_sources=liftoff;ID=HG03521_ch_G0000042;Name=MIR9985
HG03521_chrY	CAT	transcript	4327681	4327791	1000	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG03521_ch_T0000162;gene_id=HG03521_ch_G0000042;Parent=HG03521_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG03521_ch_T0000162;Name=MIR9985
HG03521_chrY	CAT	exon	4327681	4327791	.	+	.	source_transcript=hg002_chrY_paternal_62.1;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_62.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.1,hg002_chrY_paternal_62.1;transcript_id=HG03521_ch_T0000162;gene_id=HG03521_ch_G0000042;Parent=HG03521_ch_T0000162;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG03521_ch_T0000162:0;Name=MIR9985;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	4327701	4327719	1000	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG03521_ch_T0000163;gene_id=HG03521_ch_G0000042;Parent=HG03521_ch_G0000042;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=HG03521_ch_T0000163;Name=MIR9985
HG03521_chrY	CAT	exon	4327701	4327719	.	+	.	source_transcript=hg002_chrY_paternal_62.2;source_transcript_name=hg002_chrY_paternal_62.1;source_gene=hg002_chrY_paternal_62;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_62;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_62.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_62.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR9985;alternative_source_transcripts=hg002_chrY_paternal_62.2,hg002_chrY_paternal_62.2;transcript_id=HG03521_ch_T0000163;gene_id=HG03521_ch_G0000042;Parent=HG03521_ch_T0000163;transcript_name=hg002_chrY_paternal_62.1;gene_name=MIR9985;ID=exon:HG03521_ch_T0000163:0;Name=MIR9985;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	4721901	5464272	.	+	.	source_gene_common_name=PCDH11Y;source_gene=hg002_chrY_paternal_64;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;gene_id=HG03521_ch_G0000043;gene_biotype=protein_coding;gene_name=PCDH11Y;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000043;Name=PCDH11Y
HG03521_chrY	CAT	transcript	4721901	4827220	100	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03521_ch_T0000164;Name=PCDH11Y
HG03521_chrY	CAT	exon	4721901	4722210	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000164:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4722211	4752516	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000164:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4752517	4752685	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000164:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4752686	4753523	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000164:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4753524	4753629	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000164:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4753630	4754287	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000164:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4754288	4754346	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000164:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4754315	4754346	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000164:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	4754315	4754317	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03521_ch_T0000164;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4754347	4778506	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000164:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4778507	4779077	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000164:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4778507	4779077	.	+	1	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000164:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4779078	4819836	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000164:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4819837	4822329	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000164:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4819837	4822329	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000164:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4822330	4825965	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000164:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4825966	4827220	.	+	.	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000164:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4825966	4825983	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000164:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	4825981	4825983	.	+	0	source_transcript=hg002_chrY_paternal_64.1;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.1,hg002_chrY_paternal_64.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000164;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000164;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03521_ch_T0000164;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	4721901	4827220	100	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03521_ch_T0000165;Name=PCDH11Y
HG03521_chrY	CAT	exon	4721901	4722210	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000165:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4722211	4753523	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000165:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4753524	4753629	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000165:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4753630	4754287	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000165:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4754288	4754346	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000165:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4754315	4754346	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000165:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	4754315	4754317	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03521_ch_T0000165;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4754347	4778506	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000165:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4778507	4779077	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000165:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4778507	4779077	.	+	1	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000165:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4779078	4819836	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000165:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4819837	4822329	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000165:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4819837	4822329	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000165:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4822330	4825965	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000165:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4825966	4827220	.	+	.	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000165:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4825966	4825983	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000165:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	4825981	4825983	.	+	0	source_transcript=hg002_chrY_paternal_64.2;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.2,hg002_chrY_paternal_64.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000165;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000165;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03521_ch_T0000165;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	4721901	5464268	100	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03521_ch_T0000166;Name=PCDH11Y
HG03521_chrY	CAT	exon	4721901	4722210	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000166:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4722211	4778506	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000166:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4778507	4779077	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000166:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4778718	4779077	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000166:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	4778718	4778720	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03521_ch_T0000166;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4779078	4819836	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000166:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4819837	4822329	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000166:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4819837	4822329	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000166:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4822330	5222694	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000166:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5222695	5222893	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000166:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5222695	5222893	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000166:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5222894	5303835	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000166:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5303836	5303859	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000166:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5303836	5303859	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000166:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5303860	5459315	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000166:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5459316	5464268	.	+	.	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000166:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5459316	5459986	.	+	2	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000166:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	5459984	5459986	.	+	0	source_transcript=hg002_chrY_paternal_64.3;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.3,hg002_chrY_paternal_64.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000166;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000166;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03521_ch_T0000166;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	4721901	5464272	100	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03521_ch_T0000167;Name=PCDH11Y
HG03521_chrY	CAT	exon	4721901	4722210	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4722211	4724292	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000167:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4724293	4728340	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4728341	4752516	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000167:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4752517	4752685	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4752686	4752832	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000167:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4752833	4752964	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4752965	4753523	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000167:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4753524	4753629	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4753630	4754287	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000167:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4754288	4754346	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4754315	4754346	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000167:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	4754315	4754317	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03521_ch_T0000167;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4754347	4778506	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000167:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4778507	4779077	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4778507	4779077	.	+	1	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000167:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4779078	4819836	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000167:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4819837	4822329	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4819837	4822329	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000167:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4822330	5222694	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000167:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5222695	5222893	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5222695	5222893	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000167:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5222894	5303835	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000167:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5303836	5303859	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5303836	5303859	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000167:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5303860	5459315	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000167:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5459316	5464272	.	+	.	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000167:10;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5459316	5459986	.	+	2	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000167:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	5459984	5459986	.	+	0	source_transcript=hg002_chrY_paternal_64.4;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.4,hg002_chrY_paternal_64.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000167;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000167;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03521_ch_T0000167;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	4721901	5464272	100	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03521_ch_T0000168;Name=PCDH11Y
HG03521_chrY	CAT	exon	4721901	4722210	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000168:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4722211	4752516	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000168:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4752517	4752685	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000168:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4752686	4752832	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000168:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4752833	4752964	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000168:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4752965	4753523	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000168:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4753524	4753629	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000168:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4753630	4754287	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000168:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4754288	4754346	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000168:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4754315	4754346	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000168:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	4754315	4754317	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03521_ch_T0000168;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4754347	4778506	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000168:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4778507	4779077	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000168:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4778507	4779077	.	+	1	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000168:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4779078	4819836	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000168:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4819837	4822329	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000168:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4819837	4822329	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000168:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4822330	5222694	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000168:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5222695	5222893	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000168:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5222695	5222893	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000168:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5222894	5303835	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000168:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5303836	5303859	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000168:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5303836	5303859	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000168:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5303860	5459315	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000168:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5459316	5464272	.	+	.	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000168:9;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5459316	5459986	.	+	2	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000168:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	5459984	5459986	.	+	0	source_transcript=hg002_chrY_paternal_64.5;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.5,hg002_chrY_paternal_64.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000168;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000168;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03521_ch_T0000168;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	4721901	5464272	100	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03521_ch_T0000169;Name=PCDH11Y
HG03521_chrY	CAT	exon	4721901	4722210	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4722211	4724292	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4724293	4724363	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4724364	4753523	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4753524	4753629	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4753630	4754287	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4754288	4754346	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4754315	4754346	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000169:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	4754315	4754317	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03521_ch_T0000169;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4754347	4778506	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4778507	4779077	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000169:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4778507	4779077	.	+	1	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000169:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4779078	4819836	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000169:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4819837	4822329	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000169:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4819837	4822329	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000169:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4822330	5222694	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000169:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5222695	5222893	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000169:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5222695	5222893	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000169:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5222894	5303835	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000169:6;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5303836	5303859	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000169:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5303836	5303859	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000169:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5303860	5459315	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000169:7;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5459316	5464272	.	+	.	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000169:8;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5459316	5459986	.	+	2	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000169:5;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	5459984	5459986	.	+	0	source_transcript=hg002_chrY_paternal_64.6;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.6,hg002_chrY_paternal_64.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000169;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000169;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03521_ch_T0000169;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	4777706	4827220	100	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03521_ch_T0000170;Name=PCDH11Y
HG03521_chrY	CAT	exon	4777706	4779077	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4778442	4779077	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	4778442	4778444	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03521_ch_T0000170;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4779078	4819836	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000170:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4819837	4822329	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4819837	4822329	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4822330	4825965	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000170:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4825966	4827220	.	+	.	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4825966	4825983	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000170:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	4825981	4825983	.	+	0	source_transcript=hg002_chrY_paternal_64.7;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.7,hg002_chrY_paternal_64.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000170;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000170;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03521_ch_T0000170;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	4777708	5464272	100	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_G0000043;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=HG03521_ch_T0000171;Name=PCDH11Y
HG03521_chrY	CAT	exon	4777708	4779077	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4778442	4779077	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	4778442	4778444	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=start_codon:HG03521_ch_T0000171;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4779078	4819836	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000171:0;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	4819837	4822329	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	4819837	4822329	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	4822330	5222694	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000171:1;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5222695	5222893	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5222695	5222893	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5222894	5303835	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000171:2;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5303836	5303859	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5303836	5303859	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5303860	5459315	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=intron:HG03521_ch_T0000171:3;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5459316	5464272	.	+	.	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=exon:HG03521_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	5459316	5459986	.	+	2	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=CDS:HG03521_ch_T0000171:4;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	5459984	5459986	.	+	0	source_transcript=hg002_chrY_paternal_64.8;source_transcript_name=hg002_chrY_paternal_64.8;source_gene=hg002_chrY_paternal_64;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_64;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_64.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_64.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PCDH11Y;alternative_source_transcripts=hg002_chrY_paternal_64.8,hg002_chrY_paternal_64.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000171;gene_id=HG03521_ch_G0000043;Parent=HG03521_ch_T0000171;transcript_name=hg002_chrY_paternal_64.8;gene_name=PCDH11Y;ID=stop_codon:HG03521_ch_T0000171;Name=PCDH11Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	5964454	5965618	.	-	.	source_gene_common_name=TTTY23;source_gene=hg002_chrY_paternal_73;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;gene_id=HG03521_ch_G0000044;gene_biotype=lncRNA;gene_name=TTTY23;gene_sources=liftoff;ID=HG03521_ch_G0000044;Name=TTTY23
HG03521_chrY	CAT	transcript	5964454	5965618	1000	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03521_ch_T0000172;gene_id=HG03521_ch_G0000044;Parent=HG03521_ch_G0000044;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=HG03521_ch_T0000172;Name=TTTY23
HG03521_chrY	CAT	exon	5964454	5964762	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03521_ch_T0000172;gene_id=HG03521_ch_G0000044;Parent=HG03521_ch_T0000172;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG03521_ch_T0000172:0;Name=TTTY23;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5964763	5965302	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03521_ch_T0000172;gene_id=HG03521_ch_G0000044;Parent=HG03521_ch_T0000172;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG03521_ch_T0000172:0;Name=TTTY23;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5965303	5965448	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03521_ch_T0000172;gene_id=HG03521_ch_G0000044;Parent=HG03521_ch_T0000172;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG03521_ch_T0000172:1;Name=TTTY23;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	5965449	5965561	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03521_ch_T0000172;gene_id=HG03521_ch_G0000044;Parent=HG03521_ch_T0000172;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=intron:HG03521_ch_T0000172:1;Name=TTTY23;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	5965562	5965618	.	-	.	source_transcript=hg002_chrY_paternal_73.1;source_transcript_name=hg002_chrY_paternal_73.1;source_gene=hg002_chrY_paternal_73;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_73;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_73.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_73.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23;alternative_source_transcripts=hg002_chrY_paternal_73.1,hg002_chrY_paternal_73.1;transcript_id=HG03521_ch_T0000172;gene_id=HG03521_ch_G0000044;Parent=HG03521_ch_T0000172;transcript_name=hg002_chrY_paternal_73.1;gene_name=TTTY23;ID=exon:HG03521_ch_T0000172:2;Name=TTTY23;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6058903	6063106	.	-	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_77;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;gene_id=HG03521_ch_G0000045;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG03521_ch_G0000045;Name=LINC00280
HG03521_chrY	CAT	transcript	6058903	6063106	1000	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03521_ch_T0000173;gene_id=HG03521_ch_G0000045;Parent=HG03521_ch_G0000045;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=HG03521_ch_T0000173;Name=LINC00280
HG03521_chrY	CAT	exon	6058903	6059121	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03521_ch_T0000173;gene_id=HG03521_ch_G0000045;Parent=HG03521_ch_T0000173;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG03521_ch_T0000173:0;Name=LINC00280;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6059122	6060376	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03521_ch_T0000173;gene_id=HG03521_ch_G0000045;Parent=HG03521_ch_T0000173;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG03521_ch_T0000173:0;Name=LINC00280;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6060377	6060519	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03521_ch_T0000173;gene_id=HG03521_ch_G0000045;Parent=HG03521_ch_T0000173;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG03521_ch_T0000173:1;Name=LINC00280;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6060520	6063020	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03521_ch_T0000173;gene_id=HG03521_ch_G0000045;Parent=HG03521_ch_T0000173;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=intron:HG03521_ch_T0000173:1;Name=LINC00280;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6063021	6063106	.	-	.	source_transcript=hg002_chrY_paternal_77.1;source_transcript_name=hg002_chrY_paternal_77.1;source_gene=hg002_chrY_paternal_77;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_77;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_77.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_77.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_77.1,hg002_chrY_paternal_77.1;transcript_id=HG03521_ch_T0000173;gene_id=HG03521_ch_G0000045;Parent=HG03521_ch_T0000173;transcript_name=hg002_chrY_paternal_77.1;gene_name=LINC00280;ID=exon:HG03521_ch_T0000173:2;Name=LINC00280;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6063176	6065262	.	-	.	source_gene_common_name=TTTY22;source_gene=hg002_chrY_paternal_78;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;gene_id=HG03521_ch_G0000046;gene_biotype=lncRNA;gene_name=TTTY22;gene_sources=liftoff;ID=HG03521_ch_G0000046;Name=TTTY22
HG03521_chrY	CAT	transcript	6063176	6065262	1000	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03521_ch_T0000174;gene_id=HG03521_ch_G0000046;Parent=HG03521_ch_G0000046;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=HG03521_ch_T0000174;Name=TTTY22
HG03521_chrY	CAT	exon	6063176	6063221	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03521_ch_T0000174;gene_id=HG03521_ch_G0000046;Parent=HG03521_ch_T0000174;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG03521_ch_T0000174:0;Name=TTTY22;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6063222	6065107	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03521_ch_T0000174;gene_id=HG03521_ch_G0000046;Parent=HG03521_ch_T0000174;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=intron:HG03521_ch_T0000174:0;Name=TTTY22;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6065108	6065262	.	-	.	source_transcript=hg002_chrY_paternal_78.1;source_transcript_name=hg002_chrY_paternal_78.1;source_gene=hg002_chrY_paternal_78;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_78;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_78.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_78.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY22;alternative_source_transcripts=hg002_chrY_paternal_78.1,hg002_chrY_paternal_78.1;transcript_id=HG03521_ch_T0000174;gene_id=HG03521_ch_G0000046;Parent=HG03521_ch_T0000174;transcript_name=hg002_chrY_paternal_78.1;gene_name=TTTY22;ID=exon:HG03521_ch_T0000174:1;Name=TTTY22;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6068316	6071623	.	-	.	source_gene_common_name=LOC107987342;source_gene=hg002_chrY_paternal_79;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;gene_id=HG03521_ch_G0000047;gene_biotype=lncRNA;gene_name=LOC107987342;gene_sources=liftoff;ID=HG03521_ch_G0000047;Name=LOC107987342
HG03521_chrY	CAT	transcript	6068316	6071623	1000	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03521_ch_T0000175;gene_id=HG03521_ch_G0000047;Parent=HG03521_ch_G0000047;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=HG03521_ch_T0000175;Name=LOC107987342
HG03521_chrY	CAT	exon	6068316	6068464	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03521_ch_T0000175;gene_id=HG03521_ch_G0000047;Parent=HG03521_ch_T0000175;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG03521_ch_T0000175:0;Name=LOC107987342;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6068465	6070995	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03521_ch_T0000175;gene_id=HG03521_ch_G0000047;Parent=HG03521_ch_T0000175;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG03521_ch_T0000175:0;Name=LOC107987342;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6070996	6071068	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03521_ch_T0000175;gene_id=HG03521_ch_G0000047;Parent=HG03521_ch_T0000175;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG03521_ch_T0000175:1;Name=LOC107987342;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6071069	6071444	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03521_ch_T0000175;gene_id=HG03521_ch_G0000047;Parent=HG03521_ch_T0000175;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=intron:HG03521_ch_T0000175:1;Name=LOC107987342;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6071445	6071623	.	-	.	source_transcript=hg002_chrY_paternal_79.1;source_transcript_name=hg002_chrY_paternal_79.1;source_gene=hg002_chrY_paternal_79;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_79;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_79.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_79.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987342;alternative_source_transcripts=hg002_chrY_paternal_79.1,hg002_chrY_paternal_79.1;transcript_id=HG03521_ch_T0000175;gene_id=HG03521_ch_G0000047;Parent=HG03521_ch_T0000175;transcript_name=hg002_chrY_paternal_79.1;gene_name=LOC107987342;ID=exon:HG03521_ch_T0000175:2;Name=LOC107987342;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6092094	6113257	.	+	.	source_gene_common_name=TTTY1;source_gene=hg002_chrY_paternal_80;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;gene_id=HG03521_ch_G0000048;gene_biotype=lncRNA;gene_name=TTTY1;gene_sources=liftoff;ID=HG03521_ch_G0000048;Name=TTTY1
HG03521_chrY	CAT	transcript	6092094	6113257	1000	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03521_ch_T0000176;gene_id=HG03521_ch_G0000048;Parent=HG03521_ch_G0000048;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=HG03521_ch_T0000176;Name=TTTY1
HG03521_chrY	CAT	exon	6092094	6092368	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03521_ch_T0000176;gene_id=HG03521_ch_G0000048;Parent=HG03521_ch_T0000176;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03521_ch_T0000176:0;Name=TTTY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6092369	6095792	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03521_ch_T0000176;gene_id=HG03521_ch_G0000048;Parent=HG03521_ch_T0000176;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03521_ch_T0000176:0;Name=TTTY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6095793	6095952	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03521_ch_T0000176;gene_id=HG03521_ch_G0000048;Parent=HG03521_ch_T0000176;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03521_ch_T0000176:1;Name=TTTY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6095953	6102815	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03521_ch_T0000176;gene_id=HG03521_ch_G0000048;Parent=HG03521_ch_T0000176;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03521_ch_T0000176:1;Name=TTTY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6102816	6102924	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03521_ch_T0000176;gene_id=HG03521_ch_G0000048;Parent=HG03521_ch_T0000176;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03521_ch_T0000176:2;Name=TTTY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6102925	6105280	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03521_ch_T0000176;gene_id=HG03521_ch_G0000048;Parent=HG03521_ch_T0000176;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03521_ch_T0000176:2;Name=TTTY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6105281	6105418	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03521_ch_T0000176;gene_id=HG03521_ch_G0000048;Parent=HG03521_ch_T0000176;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03521_ch_T0000176:3;Name=TTTY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6105419	6112999	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03521_ch_T0000176;gene_id=HG03521_ch_G0000048;Parent=HG03521_ch_T0000176;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=intron:HG03521_ch_T0000176:3;Name=TTTY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6113000	6113257	.	+	.	source_transcript=hg002_chrY_paternal_80.1;source_transcript_name=hg002_chrY_paternal_80.1;source_gene=hg002_chrY_paternal_80;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_80;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_80.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_80.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1;alternative_source_transcripts=hg002_chrY_paternal_80.1,hg002_chrY_paternal_80.1;transcript_id=HG03521_ch_T0000176;gene_id=HG03521_ch_G0000048;Parent=HG03521_ch_T0000176;transcript_name=hg002_chrY_paternal_80.1;gene_name=TTTY1;ID=exon:HG03521_ch_T0000176:4;Name=TTTY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6107937	6130137	.	-	.	source_gene_common_name=TTTY2B;source_gene=hg002_chrY_paternal_81;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;gene_id=HG03521_ch_G0000049;gene_biotype=lncRNA;gene_name=TTTY2B;gene_sources=liftoff;ID=HG03521_ch_G0000049;Name=TTTY2B
HG03521_chrY	CAT	transcript	6107937	6130137	1000	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_G0000049;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=HG03521_ch_T0000177;Name=TTTY2B
HG03521_chrY	CAT	exon	6107937	6108616	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03521_ch_T0000177:0;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6108617	6109839	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03521_ch_T0000177:0;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6109840	6110037	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03521_ch_T0000177:1;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6110038	6110157	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03521_ch_T0000177:1;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6110158	6110236	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03521_ch_T0000177:2;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6110237	6113066	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03521_ch_T0000177:2;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6113067	6113223	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03521_ch_T0000177:3;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6113224	6113915	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03521_ch_T0000177:3;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6113916	6114064	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03521_ch_T0000177:4;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6114065	6121458	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03521_ch_T0000177:4;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6121459	6121545	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03521_ch_T0000177:5;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6121546	6124021	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03521_ch_T0000177:5;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6124022	6124099	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03521_ch_T0000177:6;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6124100	6129932	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=intron:HG03521_ch_T0000177:6;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6129933	6130137	.	-	.	source_transcript=hg002_chrY_paternal_81.1;source_transcript_name=hg002_chrY_paternal_81.1;source_gene=hg002_chrY_paternal_81;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_81;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_81.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_81.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2B;alternative_source_transcripts=hg002_chrY_paternal_81.1,hg002_chrY_paternal_81.1;transcript_id=HG03521_ch_T0000177;gene_id=HG03521_ch_G0000049;Parent=HG03521_ch_T0000177;transcript_name=hg002_chrY_paternal_81.1;gene_name=TTTY2B;ID=exon:HG03521_ch_T0000177:7;Name=TTTY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6145127	6148770	.	+	.	source_gene_common_name=TTTY21B;source_gene=hg002_chrY_paternal_82;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;gene_id=HG03521_ch_G0000050;gene_biotype=lncRNA;gene_name=TTTY21B;gene_sources=liftoff;ID=HG03521_ch_G0000050;Name=TTTY21B
HG03521_chrY	CAT	transcript	6145127	6148770	1000	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03521_ch_T0000178;gene_id=HG03521_ch_G0000050;Parent=HG03521_ch_G0000050;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=HG03521_ch_T0000178;Name=TTTY21B
HG03521_chrY	CAT	exon	6145127	6145328	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03521_ch_T0000178;gene_id=HG03521_ch_G0000050;Parent=HG03521_ch_T0000178;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG03521_ch_T0000178:0;Name=TTTY21B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6145329	6148665	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03521_ch_T0000178;gene_id=HG03521_ch_G0000050;Parent=HG03521_ch_T0000178;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=intron:HG03521_ch_T0000178:0;Name=TTTY21B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6148666	6148770	.	+	.	source_transcript=hg002_chrY_paternal_82.1;source_transcript_name=hg002_chrY_paternal_82.1;source_gene=hg002_chrY_paternal_82;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_82;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_82.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_82.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21B;alternative_source_transcripts=hg002_chrY_paternal_82.1,hg002_chrY_paternal_82.1;transcript_id=HG03521_ch_T0000178;gene_id=HG03521_ch_G0000050;Parent=HG03521_ch_T0000178;transcript_name=hg002_chrY_paternal_82.1;gene_name=TTTY21B;ID=exon:HG03521_ch_T0000178:1;Name=TTTY21B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6151161	6159599	.	+	.	source_gene_common_name=TTTY7;source_gene=hg002_chrY_paternal_83;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;gene_id=HG03521_ch_G0000051;gene_biotype=lncRNA;gene_name=TTTY7;gene_sources=liftoff;ID=HG03521_ch_G0000051;Name=TTTY7
HG03521_chrY	CAT	transcript	6151161	6159599	1000	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_G0000051;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=HG03521_ch_T0000179;Name=TTTY7
HG03521_chrY	CAT	exon	6151161	6151197	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03521_ch_T0000179:0;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6151198	6152138	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03521_ch_T0000179:0;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6152139	6152300	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03521_ch_T0000179:1;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6152301	6154607	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03521_ch_T0000179:1;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6154608	6154682	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03521_ch_T0000179:2;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6154683	6155370	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03521_ch_T0000179:2;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6155371	6155847	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03521_ch_T0000179:3;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6155848	6157764	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03521_ch_T0000179:3;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6157765	6157878	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03521_ch_T0000179:4;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6157879	6158851	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03521_ch_T0000179:4;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6158852	6159107	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03521_ch_T0000179:5;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6159108	6159353	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=intron:HG03521_ch_T0000179:5;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6159354	6159599	.	+	.	source_transcript=hg002_chrY_paternal_83.1;source_transcript_name=hg002_chrY_paternal_83.1;source_gene=hg002_chrY_paternal_83;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_83;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_83.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_83.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7;alternative_source_transcripts=hg002_chrY_paternal_83.1,hg002_chrY_paternal_83.1;transcript_id=HG03521_ch_T0000179;gene_id=HG03521_ch_G0000051;Parent=HG03521_ch_T0000179;transcript_name=hg002_chrY_paternal_83.1;gene_name=TTTY7;ID=exon:HG03521_ch_T0000179:6;Name=TTTY7;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6172720	6175319	.	-	.	source_gene_common_name=TTTY8B;source_gene=hg002_chrY_paternal_84;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;gene_id=HG03521_ch_G0000052;gene_biotype=lncRNA;gene_name=TTTY8B;gene_sources=liftoff;ID=HG03521_ch_G0000052;Name=TTTY8B
HG03521_chrY	CAT	transcript	6172720	6175319	1000	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03521_ch_T0000180;gene_id=HG03521_ch_G0000052;Parent=HG03521_ch_G0000052;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=HG03521_ch_T0000180;Name=TTTY8B
HG03521_chrY	CAT	exon	6172720	6172909	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03521_ch_T0000180;gene_id=HG03521_ch_G0000052;Parent=HG03521_ch_T0000180;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG03521_ch_T0000180:0;Name=TTTY8B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6172910	6174501	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03521_ch_T0000180;gene_id=HG03521_ch_G0000052;Parent=HG03521_ch_T0000180;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG03521_ch_T0000180:0;Name=TTTY8B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6174502	6174706	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03521_ch_T0000180;gene_id=HG03521_ch_G0000052;Parent=HG03521_ch_T0000180;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG03521_ch_T0000180:1;Name=TTTY8B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6174707	6175183	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03521_ch_T0000180;gene_id=HG03521_ch_G0000052;Parent=HG03521_ch_T0000180;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=intron:HG03521_ch_T0000180:1;Name=TTTY8B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6175184	6175319	.	-	.	source_transcript=hg002_chrY_paternal_84.1;source_transcript_name=hg002_chrY_paternal_84.1;source_gene=hg002_chrY_paternal_84;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_84;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_84.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_84.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8B;alternative_source_transcripts=hg002_chrY_paternal_84.1,hg002_chrY_paternal_84.1;transcript_id=HG03521_ch_T0000180;gene_id=HG03521_ch_G0000052;Parent=HG03521_ch_T0000180;transcript_name=hg002_chrY_paternal_84.1;gene_name=TTTY8B;ID=exon:HG03521_ch_T0000180:2;Name=TTTY8B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6551851	6597693	.	-	.	source_gene_common_name=AMELY;source_gene=hg002_chrY_paternal_88;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;gene_id=HG03521_ch_G0000053;gene_biotype=protein_coding;gene_name=AMELY;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000053;Name=AMELY
HG03521_chrY	CAT	transcript	6551851	6559960	100	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_G0000053;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG03521_ch_T0000181;Name=AMELY
HG03521_chrY	CAT	exon	6551851	6552011	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000181:0;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6552006	6552011	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000181:0;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6552006	6552008	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG03521_ch_T0000181;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6552012	6553969	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000181:0;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6553970	6554395	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000181:1;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6553970	6554395	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000181:1;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6554396	6554664	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000181:1;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6554665	6554709	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000181:2;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6554665	6554709	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000181:2;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6554710	6554800	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000181:2;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6554801	6554842	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000181:3;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6554801	6554842	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000181:3;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6554843	6555938	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000181:3;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6555939	6555986	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000181:4;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6555939	6555986	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000181:4;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6555987	6558487	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000181:4;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6558488	6558553	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000181:5;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6558488	6558541	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000181:5;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6558539	6558541	.	-	0	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG03521_ch_T0000181;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6558554	6559904	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000181:5;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6559905	6559960	.	-	.	source_transcript=hg002_chrY_paternal_88.1;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.1,hg002_chrY_paternal_88.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000181;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000181;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000181:6;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6551851	6597693	100	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_G0000053;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=HG03521_ch_T0000182;Name=AMELY
HG03521_chrY	CAT	exon	6551851	6552011	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000182:0;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6552006	6552011	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000182:0;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6552006	6552008	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=stop_codon:HG03521_ch_T0000182;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6552012	6553969	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000182:0;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6553970	6554395	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000182:1;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6553970	6554395	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000182:1;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6554396	6554664	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000182:1;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6554665	6554709	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000182:2;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6554665	6554709	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000182:2;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6554710	6555938	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000182:2;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6555939	6555986	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000182:3;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6555939	6555986	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000182:3;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6555987	6558487	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000182:3;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6558488	6558553	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000182:4;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6558488	6558541	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=CDS:HG03521_ch_T0000182:4;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6558539	6558541	.	-	0	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=start_codon:HG03521_ch_T0000182;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6558554	6559904	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000182:4;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6559905	6560004	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000182:5;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6560005	6597613	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=intron:HG03521_ch_T0000182:5;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6597614	6597693	.	-	.	source_transcript=hg002_chrY_paternal_88.2;source_transcript_name=hg002_chrY_paternal_88.2;source_gene=hg002_chrY_paternal_88;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_88;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_88.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_88.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=AMELY;alternative_source_transcripts=hg002_chrY_paternal_88.2,hg002_chrY_paternal_88.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000182;gene_id=HG03521_ch_G0000053;Parent=HG03521_ch_T0000182;transcript_name=hg002_chrY_paternal_88.2;gene_name=AMELY;ID=exon:HG03521_ch_T0000182:6;Name=AMELY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6595806	6791615	.	+	.	source_gene_common_name=TBL1Y;source_gene=hg002_chrY_paternal_90;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;gene_id=HG03521_ch_G0000054;gene_biotype=protein_coding;gene_name=TBL1Y;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000054;Name=TBL1Y
HG03521_chrY	CAT	transcript	6595806	6791615	100	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000183;Name=TBL1Y
HG03521_chrY	CAT	exon	6595806	6596044	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596045	6598028	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6598029	6598113	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6598114	6664140	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6664141	6664171	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6664172	6681738	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6681739	6681833	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6681834	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000183;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773193	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773194	6773359	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773194	6773359	.	+	1	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6773360	6776015	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6776016	6776117	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6776016	6776117	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6776118	6786711	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000183:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6786712	6791615	.	+	.	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000183:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6786712	6786897	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000183:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6786895	6786897	.	+	0	source_transcript=hg002_chrY_paternal_90.1;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.1,hg002_chrY_paternal_90.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000183;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000183;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000183;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6596638	6791615	100	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000184;Name=TBL1Y
HG03521_chrY	CAT	exon	6596638	6596923	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596924	6598028	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6598029	6598113	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6598114	6664140	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6664141	6664171	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6664172	6681738	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6681739	6681833	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6681834	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000184;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773193	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773194	6773359	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773194	6773359	.	+	1	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6773360	6776015	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6776016	6776117	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6776016	6776117	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6776118	6786711	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000184:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6786712	6791615	.	+	.	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000184:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6786712	6786897	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000184:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6786895	6786897	.	+	0	source_transcript=hg002_chrY_paternal_90.10;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.10,hg002_chrY_paternal_90.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000184;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000184;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000184;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6596638	6791615	100	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000185;Name=TBL1Y
HG03521_chrY	CAT	exon	6596638	6596923	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596924	6598028	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6598029	6598113	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6598114	6664140	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6664141	6664171	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6664172	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000185;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773193	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773194	6773359	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773194	6773359	.	+	1	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6773360	6776015	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6776016	6776117	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6776016	6776117	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6776118	6786711	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000185:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6786712	6791615	.	+	.	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000185:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6786712	6786897	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000185:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6786895	6786897	.	+	0	source_transcript=hg002_chrY_paternal_90.11;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.11,hg002_chrY_paternal_90.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000185;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000185;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000185;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6596638	6777610	100	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000186;Name=TBL1Y
HG03521_chrY	CAT	exon	6596638	6596923	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596924	6598028	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6598029	6598113	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6598114	6664140	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6664141	6664171	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6664172	6681738	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6681739	6681833	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6681834	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000186;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773193	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773194	6773359	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773194	6773359	.	+	1	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6773360	6776015	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6776016	6776117	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6776016	6776117	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6776118	6777398	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000186:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6777399	6777610	.	+	.	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000186:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6777399	6777419	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000186:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6777417	6777419	.	+	0	source_transcript=hg002_chrY_paternal_90.2;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.2,hg002_chrY_paternal_90.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000186;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000186;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000186;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6596638	6777610	100	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000187;Name=TBL1Y
HG03521_chrY	CAT	exon	6596638	6596923	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596924	6598028	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6598029	6598113	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6598114	6681738	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6681739	6681833	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6681834	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000187;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773193	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773194	6773359	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773194	6773359	.	+	1	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6773360	6776015	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6776016	6776117	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6776016	6776117	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6776118	6777398	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000187:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6777399	6777610	.	+	.	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000187:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6777399	6777419	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000187:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6777417	6777419	.	+	0	source_transcript=hg002_chrY_paternal_90.3;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.3,hg002_chrY_paternal_90.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000187;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000187;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000187;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6596638	6777610	100	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000188;Name=TBL1Y
HG03521_chrY	CAT	exon	6596638	6596923	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596924	6598028	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6598029	6598113	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6598114	6664140	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6664141	6664171	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6664172	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000188;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773193	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773194	6773359	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773194	6773359	.	+	1	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6773360	6776015	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6776016	6776117	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6776016	6776117	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6776118	6777398	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000188:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6777399	6777610	.	+	.	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000188:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6777399	6777419	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000188:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6777417	6777419	.	+	0	source_transcript=hg002_chrY_paternal_90.4;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.4,hg002_chrY_paternal_90.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000188;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000188;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000188;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6596638	6777610	100	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000189;Name=TBL1Y
HG03521_chrY	CAT	exon	6596638	6596923	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596924	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000189;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773193	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773194	6773359	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773194	6773359	.	+	1	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6773360	6776015	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6776016	6776117	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6776016	6776117	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6776118	6777398	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000189:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6777399	6777610	.	+	.	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000189:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6777399	6777419	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000189:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6777417	6777419	.	+	0	source_transcript=hg002_chrY_paternal_90.5;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.5,hg002_chrY_paternal_90.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000189;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000189;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000189;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6596638	6791615	100	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000190;Name=TBL1Y
HG03521_chrY	CAT	exon	6596638	6596923	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596924	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000190;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773193	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773194	6773359	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773194	6773359	.	+	1	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6773360	6776015	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6776016	6776117	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6776016	6776117	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6776118	6786711	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000190:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6786712	6791615	.	+	.	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000190:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6786712	6786897	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000190:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6786895	6786897	.	+	0	source_transcript=hg002_chrY_paternal_90.6;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.6,hg002_chrY_paternal_90.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000190;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000190;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000190;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6596638	6791615	100	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000191;Name=TBL1Y
HG03521_chrY	CAT	exon	6596638	6596923	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596924	6598028	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6598029	6598113	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6598114	6664140	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6664141	6664171	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6664172	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000191;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773193	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773194	6773359	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773194	6773359	.	+	1	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6773360	6776015	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6776016	6776117	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6776016	6776117	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6776118	6786711	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:16;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6786712	6786777	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6786712	6786777	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6786778	6791324	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000191:17;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6791325	6791615	.	+	.	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000191:18;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6791325	6791333	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000191:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6791331	6791333	.	+	0	source_transcript=hg002_chrY_paternal_90.7;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.7,hg002_chrY_paternal_90.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000191;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000191;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000191;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6596638	6791615	100	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000192;Name=TBL1Y
HG03521_chrY	CAT	exon	6596638	6596923	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596924	6598028	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6598029	6598113	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6598114	6664140	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6664141	6664171	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6664172	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000192;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773213	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000192:14;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773214	6791615	.	+	.	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000192:15;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773214	6773319	.	+	1	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000192:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6773317	6773319	.	+	0	source_transcript=hg002_chrY_paternal_90.8;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.8,hg002_chrY_paternal_90.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000192;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000192;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000192;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6596638	6791615	100	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000193;Name=TBL1Y
HG03521_chrY	CAT	exon	6596638	6596923	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6596924	6707382	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6707383	6707471	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6707472	6710968	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6710969	6711076	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6711019	6711076	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6711019	6711021	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000193;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6711077	6728912	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6728913	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728913	6729058	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773213	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000193:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773214	6791615	.	+	.	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000193:13;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773214	6773319	.	+	1	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000193:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6773317	6773319	.	+	0	source_transcript=hg002_chrY_paternal_90.9;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.9,hg002_chrY_paternal_90.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000193;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000193;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000193;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	6728544	6777610	100	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_G0000054;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=HG03521_ch_T0000194;Name=TBL1Y
HG03521_chrY	CAT	exon	6728544	6729058	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6728813	6729058	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	6728813	6728815	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=start_codon:HG03521_ch_T0000194;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6729059	6749829	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:0;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6749830	6750082	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6749830	6750082	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6750083	6756128	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:1;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756129	6756261	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756129	6756261	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756262	6756652	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:2;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6756653	6756794	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6756653	6756794	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6756795	6757492	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:3;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757493	6757556	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757493	6757556	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757557	6757665	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:4;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6757666	6757763	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6757666	6757763	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6757764	6760492	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:5;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6760493	6760553	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6760493	6760553	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6760554	6766660	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:6;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6766661	6766782	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6766661	6766782	.	+	2	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6766783	6771824	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:7;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6771825	6771899	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6771825	6771899	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6771900	6772216	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:8;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6772217	6772344	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6772217	6772344	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6772345	6773193	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:9;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6773194	6773359	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6773194	6773359	.	+	1	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6773360	6776015	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:10;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6776016	6776117	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6776016	6776117	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6776118	6777398	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=intron:HG03521_ch_T0000194:11;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6777399	6777610	.	+	.	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=exon:HG03521_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	6777399	6777419	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=CDS:HG03521_ch_T0000194:12;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	6777417	6777419	.	+	0	source_transcript=hg002_chrY_paternal_90.12;source_transcript_name=hg002_chrY_paternal_90.12;source_gene=hg002_chrY_paternal_90;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_90;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_90.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_90.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TBL1Y;alternative_source_transcripts=hg002_chrY_paternal_90.12,hg002_chrY_paternal_90.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000194;gene_id=HG03521_ch_G0000054;Parent=HG03521_ch_T0000194;transcript_name=hg002_chrY_paternal_90.12;gene_name=TBL1Y;ID=stop_codon:HG03521_ch_T0000194;Name=TBL1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	6959877	7067444	.	+	.	source_gene_common_name=PRKY;source_gene=hg002_chrY_paternal_93;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;gene_id=HG03521_ch_G0000055;gene_biotype=transcribed_pseudogene;gene_name=PRKY;gene_sources=liftoff;ID=HG03521_ch_G0000055;Name=PRKY
HG03521_chrY	CAT	transcript	6959877	7067444	1000	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_G0000055;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=HG03521_ch_T0000195;Name=PRKY
HG03521_chrY	CAT	exon	6959877	6960383	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03521_ch_T0000195:0;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6960384	6989834	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03521_ch_T0000195:0;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	6989835	6990003	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03521_ch_T0000195:1;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	6990004	7011803	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03521_ch_T0000195:1;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7011804	7012067	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03521_ch_T0000195:2;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7012068	7027012	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03521_ch_T0000195:2;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7027013	7027132	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03521_ch_T0000195:3;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7027133	7042031	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03521_ch_T0000195:3;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7042032	7042127	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03521_ch_T0000195:4;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7042128	7053252	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03521_ch_T0000195:4;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7053253	7053330	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03521_ch_T0000195:5;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7053331	7057639	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03521_ch_T0000195:5;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7057640	7057786	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03521_ch_T0000195:6;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7057787	7061608	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=intron:HG03521_ch_T0000195:6;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7061609	7067444	.	+	.	source_transcript=hg002_chrY_paternal_93.1;source_transcript_name=hg002_chrY_paternal_93.1;source_gene=hg002_chrY_paternal_93;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_93;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_93.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_93.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRKY;alternative_source_transcripts=hg002_chrY_paternal_93.1,hg002_chrY_paternal_93.1;transcript_id=HG03521_ch_T0000195;gene_id=HG03521_ch_G0000055;Parent=HG03521_ch_T0000195;transcript_name=hg002_chrY_paternal_93.1;gene_name=PRKY;ID=exon:HG03521_ch_T0000195:7;Name=PRKY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	7144508	7206539	.	+	.	source_gene_common_name=LOC107987338;source_gene=hg002_chrY_paternal_97;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;gene_id=HG03521_ch_G0000056;gene_biotype=lncRNA;gene_name=LOC107987338;gene_sources=liftoff;ID=HG03521_ch_G0000056;Name=LOC107987338
HG03521_chrY	CAT	transcript	7144508	7206539	1000	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03521_ch_T0000196;gene_id=HG03521_ch_G0000056;Parent=HG03521_ch_G0000056;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=HG03521_ch_T0000196;Name=LOC107987338
HG03521_chrY	CAT	exon	7144508	7144621	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03521_ch_T0000196;gene_id=HG03521_ch_G0000056;Parent=HG03521_ch_T0000196;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03521_ch_T0000196:0;Name=LOC107987338;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7144622	7186934	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03521_ch_T0000196;gene_id=HG03521_ch_G0000056;Parent=HG03521_ch_T0000196;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG03521_ch_T0000196:0;Name=LOC107987338;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7186935	7187093	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03521_ch_T0000196;gene_id=HG03521_ch_G0000056;Parent=HG03521_ch_T0000196;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03521_ch_T0000196:1;Name=LOC107987338;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7187094	7204883	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03521_ch_T0000196;gene_id=HG03521_ch_G0000056;Parent=HG03521_ch_T0000196;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG03521_ch_T0000196:1;Name=LOC107987338;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7204884	7204992	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03521_ch_T0000196;gene_id=HG03521_ch_G0000056;Parent=HG03521_ch_T0000196;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03521_ch_T0000196:2;Name=LOC107987338;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7204993	7206023	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03521_ch_T0000196;gene_id=HG03521_ch_G0000056;Parent=HG03521_ch_T0000196;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=intron:HG03521_ch_T0000196:2;Name=LOC107987338;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7206024	7206539	.	+	.	source_transcript=hg002_chrY_paternal_97.1;source_transcript_name=hg002_chrY_paternal_97.1;source_gene=hg002_chrY_paternal_97;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_97;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_97.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_97.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987338;alternative_source_transcripts=hg002_chrY_paternal_97.1,hg002_chrY_paternal_97.1;transcript_id=HG03521_ch_T0000196;gene_id=HG03521_ch_G0000056;Parent=HG03521_ch_T0000196;transcript_name=hg002_chrY_paternal_97.1;gene_name=LOC107987338;ID=exon:HG03521_ch_T0000196:3;Name=LOC107987338;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	7385441	7387332	.	-	.	source_gene_common_name=TTTY16;source_gene=hg002_chrY_paternal_101;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;gene_id=HG03521_ch_G0000057;gene_biotype=lncRNA;gene_name=TTTY16;gene_sources=liftoff;ID=HG03521_ch_G0000057;Name=TTTY16
HG03521_chrY	CAT	transcript	7385441	7387332	1000	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03521_ch_T0000197;gene_id=HG03521_ch_G0000057;Parent=HG03521_ch_G0000057;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=HG03521_ch_T0000197;Name=TTTY16
HG03521_chrY	CAT	exon	7385441	7385571	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03521_ch_T0000197;gene_id=HG03521_ch_G0000057;Parent=HG03521_ch_T0000197;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG03521_ch_T0000197:0;Name=TTTY16;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7385572	7387271	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03521_ch_T0000197;gene_id=HG03521_ch_G0000057;Parent=HG03521_ch_T0000197;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=intron:HG03521_ch_T0000197:0;Name=TTTY16;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7387272	7387332	.	-	.	source_transcript=hg002_chrY_paternal_101.1;source_transcript_name=hg002_chrY_paternal_101.1;source_gene=hg002_chrY_paternal_101;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_101;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_101.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_101.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY16;alternative_source_transcripts=hg002_chrY_paternal_101.1,hg002_chrY_paternal_101.1;transcript_id=HG03521_ch_T0000197;gene_id=HG03521_ch_G0000057;Parent=HG03521_ch_T0000197;transcript_name=hg002_chrY_paternal_101.1;gene_name=TTTY16;ID=exon:HG03521_ch_T0000197:1;Name=TTTY16;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	7468846	7499224	.	-	.	source_gene_common_name=LOC107987339;source_gene=hg002_chrY_paternal_103;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;gene_id=HG03521_ch_G0000058;gene_biotype=lncRNA;gene_name=LOC107987339;gene_sources=liftoff;ID=HG03521_ch_G0000058;Name=LOC107987339
HG03521_chrY	CAT	transcript	7468846	7499224	1000	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03521_ch_T0000198;gene_id=HG03521_ch_G0000058;Parent=HG03521_ch_G0000058;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=HG03521_ch_T0000198;Name=LOC107987339
HG03521_chrY	CAT	exon	7468846	7468893	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03521_ch_T0000198;gene_id=HG03521_ch_G0000058;Parent=HG03521_ch_T0000198;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG03521_ch_T0000198:0;Name=LOC107987339;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7468894	7494848	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03521_ch_T0000198;gene_id=HG03521_ch_G0000058;Parent=HG03521_ch_T0000198;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG03521_ch_T0000198:0;Name=LOC107987339;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7494849	7494958	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03521_ch_T0000198;gene_id=HG03521_ch_G0000058;Parent=HG03521_ch_T0000198;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG03521_ch_T0000198:1;Name=LOC107987339;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7494959	7498507	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03521_ch_T0000198;gene_id=HG03521_ch_G0000058;Parent=HG03521_ch_T0000198;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=intron:HG03521_ch_T0000198:1;Name=LOC107987339;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7498508	7499224	.	-	.	source_transcript=hg002_chrY_paternal_103.1;source_transcript_name=hg002_chrY_paternal_103.1;source_gene=hg002_chrY_paternal_103;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_103;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_103.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_103.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987339;alternative_source_transcripts=hg002_chrY_paternal_103.1,hg002_chrY_paternal_103.1;transcript_id=HG03521_ch_T0000198;gene_id=HG03521_ch_G0000058;Parent=HG03521_ch_T0000198;transcript_name=hg002_chrY_paternal_103.1;gene_name=LOC107987339;ID=exon:HG03521_ch_T0000198:2;Name=LOC107987339;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	7493369	7500037	.	+	.	source_gene_common_name=TTTY12;source_gene=hg002_chrY_paternal_104;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;gene_id=HG03521_ch_G0000059;gene_biotype=lncRNA;gene_name=TTTY12;gene_sources=liftoff;ID=HG03521_ch_G0000059;Name=TTTY12
HG03521_chrY	CAT	transcript	7493369	7500037	1000	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03521_ch_T0000199;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_G0000059;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG03521_ch_T0000199;Name=TTTY12
HG03521_chrY	CAT	exon	7493369	7493416	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03521_ch_T0000199;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000199;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03521_ch_T0000199:0;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7493417	7494277	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03521_ch_T0000199;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000199;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03521_ch_T0000199:0;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7494278	7494433	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03521_ch_T0000199;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000199;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03521_ch_T0000199:1;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7494434	7499214	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03521_ch_T0000199;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000199;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03521_ch_T0000199:1;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7499215	7500037	.	+	.	source_transcript=hg002_chrY_paternal_104.1;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.1,hg002_chrY_paternal_104.1;transcript_id=HG03521_ch_T0000199;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000199;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03521_ch_T0000199:2;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	7493369	7500037	1000	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03521_ch_T0000200;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_G0000059;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=HG03521_ch_T0000200;Name=TTTY12
HG03521_chrY	CAT	exon	7493369	7493416	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03521_ch_T0000200;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000200;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03521_ch_T0000200:0;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7493417	7494277	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03521_ch_T0000200;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000200;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03521_ch_T0000200:0;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7494278	7494433	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03521_ch_T0000200;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000200;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03521_ch_T0000200:1;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7494434	7494897	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03521_ch_T0000200;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000200;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03521_ch_T0000200:1;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7494898	7494979	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03521_ch_T0000200;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000200;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03521_ch_T0000200:2;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7494980	7499214	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03521_ch_T0000200;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000200;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=intron:HG03521_ch_T0000200:2;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7499215	7500037	.	+	.	source_transcript=hg002_chrY_paternal_104.2;source_transcript_name=hg002_chrY_paternal_104.1;source_gene=hg002_chrY_paternal_104;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_104;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_104.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_104.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY12;alternative_source_transcripts=hg002_chrY_paternal_104.2,hg002_chrY_paternal_104.2;transcript_id=HG03521_ch_T0000200;gene_id=HG03521_ch_G0000059;Parent=HG03521_ch_T0000200;transcript_name=hg002_chrY_paternal_104.1;gene_name=TTTY12;ID=exon:HG03521_ch_T0000200:3;Name=TTTY12;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	7520169	7548125	.	-	.	source_gene_common_name=LOC105377229;source_gene=hg002_chrY_paternal_105;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;gene_id=HG03521_ch_G0000060;gene_biotype=lncRNA;gene_name=LOC105377229;gene_sources=liftoff;ID=HG03521_ch_G0000060;Name=LOC105377229
HG03521_chrY	CAT	transcript	7520169	7548125	1000	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03521_ch_T0000201;gene_id=HG03521_ch_G0000060;Parent=HG03521_ch_G0000060;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=HG03521_ch_T0000201;Name=LOC105377229
HG03521_chrY	CAT	exon	7520169	7521444	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03521_ch_T0000201;gene_id=HG03521_ch_G0000060;Parent=HG03521_ch_T0000201;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03521_ch_T0000201:0;Name=LOC105377229;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7521445	7521591	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03521_ch_T0000201;gene_id=HG03521_ch_G0000060;Parent=HG03521_ch_T0000201;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG03521_ch_T0000201:0;Name=LOC105377229;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7521592	7521763	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03521_ch_T0000201;gene_id=HG03521_ch_G0000060;Parent=HG03521_ch_T0000201;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03521_ch_T0000201:1;Name=LOC105377229;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7521764	7522331	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03521_ch_T0000201;gene_id=HG03521_ch_G0000060;Parent=HG03521_ch_T0000201;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG03521_ch_T0000201:1;Name=LOC105377229;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7522332	7522456	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03521_ch_T0000201;gene_id=HG03521_ch_G0000060;Parent=HG03521_ch_T0000201;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03521_ch_T0000201:2;Name=LOC105377229;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	7522457	7548056	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03521_ch_T0000201;gene_id=HG03521_ch_G0000060;Parent=HG03521_ch_T0000201;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=intron:HG03521_ch_T0000201:2;Name=LOC105377229;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	7548057	7548125	.	-	.	source_transcript=hg002_chrY_paternal_105.1;source_transcript_name=hg002_chrY_paternal_105.1;source_gene=hg002_chrY_paternal_105;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_105;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_105.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_105.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377229;alternative_source_transcripts=hg002_chrY_paternal_105.1,hg002_chrY_paternal_105.1;transcript_id=HG03521_ch_T0000201;gene_id=HG03521_ch_G0000060;Parent=HG03521_ch_T0000201;transcript_name=hg002_chrY_paternal_105.1;gene_name=LOC105377229;ID=exon:HG03521_ch_T0000201:3;Name=LOC105377229;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8084456	8096723	.	+	.	source_gene_common_name=LOC105377231;source_gene=hg002_chrY_paternal_124;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;gene_id=HG03521_ch_G0000061;gene_biotype=lncRNA;gene_name=LOC105377231;gene_sources=liftoff;ID=HG03521_ch_G0000061;Name=LOC105377231
HG03521_chrY	CAT	transcript	8084456	8096723	1000	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03521_ch_T0000202;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_G0000061;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG03521_ch_T0000202;Name=LOC105377231
HG03521_chrY	CAT	exon	8084456	8084541	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03521_ch_T0000202;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000202;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03521_ch_T0000202:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8084542	8092135	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03521_ch_T0000202;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000202;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03521_ch_T0000202:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8092136	8092389	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03521_ch_T0000202;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000202;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03521_ch_T0000202:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8092390	8093090	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03521_ch_T0000202;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000202;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03521_ch_T0000202:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8093091	8093243	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03521_ch_T0000202;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000202;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03521_ch_T0000202:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8093244	8096535	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03521_ch_T0000202;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000202;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03521_ch_T0000202:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8096536	8096723	.	+	.	source_transcript=hg002_chrY_paternal_124.1;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.1,hg002_chrY_paternal_124.1;transcript_id=HG03521_ch_T0000202;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000202;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03521_ch_T0000202:3;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	8084456	8096723	1000	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03521_ch_T0000203;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_G0000061;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=HG03521_ch_T0000203;Name=LOC105377231
HG03521_chrY	CAT	exon	8084456	8084541	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03521_ch_T0000203;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000203;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03521_ch_T0000203:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8084542	8092135	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03521_ch_T0000203;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000203;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03521_ch_T0000203:0;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8092136	8092379	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03521_ch_T0000203;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000203;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03521_ch_T0000203:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8092380	8093090	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03521_ch_T0000203;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000203;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03521_ch_T0000203:1;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8093091	8093243	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03521_ch_T0000203;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000203;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03521_ch_T0000203:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8093244	8096535	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03521_ch_T0000203;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000203;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=intron:HG03521_ch_T0000203:2;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8096536	8096723	.	+	.	source_transcript=hg002_chrY_paternal_124.2;source_transcript_name=hg002_chrY_paternal_124.1;source_gene=hg002_chrY_paternal_124;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_124;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_124.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_124.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377231;alternative_source_transcripts=hg002_chrY_paternal_124.2,hg002_chrY_paternal_124.2;transcript_id=HG03521_ch_T0000203;gene_id=HG03521_ch_G0000061;Parent=HG03521_ch_T0000203;transcript_name=hg002_chrY_paternal_124.1;gene_name=LOC105377231;ID=exon:HG03521_ch_T0000203:3;Name=LOC105377231;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8238453	8240664	.	-	.	source_gene_common_name=LOC105377232;source_gene=hg002_chrY_paternal_128;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;gene_id=HG03521_ch_G0000062;gene_biotype=lncRNA;gene_name=LOC105377232;gene_sources=liftoff;ID=HG03521_ch_G0000062;Name=LOC105377232
HG03521_chrY	CAT	transcript	8238453	8240664	1000	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03521_ch_T0000204;gene_id=HG03521_ch_G0000062;Parent=HG03521_ch_G0000062;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=HG03521_ch_T0000204;Name=LOC105377232
HG03521_chrY	CAT	exon	8238453	8238467	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03521_ch_T0000204;gene_id=HG03521_ch_G0000062;Parent=HG03521_ch_T0000204;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG03521_ch_T0000204:0;Name=LOC105377232;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8238468	8239153	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03521_ch_T0000204;gene_id=HG03521_ch_G0000062;Parent=HG03521_ch_T0000204;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG03521_ch_T0000204:0;Name=LOC105377232;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8239154	8239228	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03521_ch_T0000204;gene_id=HG03521_ch_G0000062;Parent=HG03521_ch_T0000204;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG03521_ch_T0000204:1;Name=LOC105377232;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8239229	8240650	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03521_ch_T0000204;gene_id=HG03521_ch_G0000062;Parent=HG03521_ch_T0000204;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=intron:HG03521_ch_T0000204:1;Name=LOC105377232;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8240651	8240664	.	-	.	source_transcript=hg002_chrY_paternal_128.1;source_transcript_name=hg002_chrY_paternal_128.1;source_gene=hg002_chrY_paternal_128;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_128;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_128.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_128.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377232;alternative_source_transcripts=hg002_chrY_paternal_128.1,hg002_chrY_paternal_128.1;transcript_id=HG03521_ch_T0000204;gene_id=HG03521_ch_G0000062;Parent=HG03521_ch_T0000204;transcript_name=hg002_chrY_paternal_128.1;gene_name=LOC105377232;ID=exon:HG03521_ch_T0000204:2;Name=LOC105377232;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8250142	8251628	.	-	.	source_gene_common_name=LOC107987354;source_gene=hg002_chrY_paternal_129;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;gene_id=HG03521_ch_G0000063;gene_biotype=lncRNA;gene_name=LOC107987354;gene_sources=liftoff;ID=HG03521_ch_G0000063;Name=LOC107987354
HG03521_chrY	CAT	transcript	8250142	8251628	1000	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03521_ch_T0000205;gene_id=HG03521_ch_G0000063;Parent=HG03521_ch_G0000063;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=HG03521_ch_T0000205;Name=LOC107987354
HG03521_chrY	CAT	exon	8250142	8250300	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03521_ch_T0000205;gene_id=HG03521_ch_G0000063;Parent=HG03521_ch_T0000205;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG03521_ch_T0000205:0;Name=LOC107987354;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8250301	8250451	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03521_ch_T0000205;gene_id=HG03521_ch_G0000063;Parent=HG03521_ch_T0000205;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG03521_ch_T0000205:0;Name=LOC107987354;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8250452	8250526	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03521_ch_T0000205;gene_id=HG03521_ch_G0000063;Parent=HG03521_ch_T0000205;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG03521_ch_T0000205:1;Name=LOC107987354;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8250527	8251490	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03521_ch_T0000205;gene_id=HG03521_ch_G0000063;Parent=HG03521_ch_T0000205;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=intron:HG03521_ch_T0000205:1;Name=LOC107987354;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8251491	8251628	.	-	.	source_transcript=hg002_chrY_paternal_129.1;source_transcript_name=hg002_chrY_paternal_129.1;source_gene=hg002_chrY_paternal_129;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_129;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_129.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_129.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987354;alternative_source_transcripts=hg002_chrY_paternal_129.1,hg002_chrY_paternal_129.1;transcript_id=HG03521_ch_T0000205;gene_id=HG03521_ch_G0000063;Parent=HG03521_ch_T0000205;transcript_name=hg002_chrY_paternal_129.1;gene_name=LOC107987354;ID=exon:HG03521_ch_T0000205:2;Name=LOC107987354;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8327883	8334718	.	+	.	source_gene_common_name=LINC00279;source_gene=hg002_chrY_paternal_130;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;gene_id=HG03521_ch_G0000064;gene_biotype=lncRNA;gene_name=LINC00279;gene_sources=liftoff;ID=HG03521_ch_G0000064;Name=LINC00279
HG03521_chrY	CAT	transcript	8327883	8334718	1000	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03521_ch_T0000206;gene_id=HG03521_ch_G0000064;Parent=HG03521_ch_G0000064;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=HG03521_ch_T0000206;Name=LINC00279
HG03521_chrY	CAT	exon	8327883	8327995	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03521_ch_T0000206;gene_id=HG03521_ch_G0000064;Parent=HG03521_ch_T0000206;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03521_ch_T0000206:0;Name=LINC00279;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8327996	8333720	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03521_ch_T0000206;gene_id=HG03521_ch_G0000064;Parent=HG03521_ch_T0000206;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG03521_ch_T0000206:0;Name=LINC00279;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8333721	8333916	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03521_ch_T0000206;gene_id=HG03521_ch_G0000064;Parent=HG03521_ch_T0000206;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03521_ch_T0000206:1;Name=LINC00279;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8333917	8334267	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03521_ch_T0000206;gene_id=HG03521_ch_G0000064;Parent=HG03521_ch_T0000206;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG03521_ch_T0000206:1;Name=LINC00279;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8334268	8334510	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03521_ch_T0000206;gene_id=HG03521_ch_G0000064;Parent=HG03521_ch_T0000206;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03521_ch_T0000206:2;Name=LINC00279;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8334511	8334642	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03521_ch_T0000206;gene_id=HG03521_ch_G0000064;Parent=HG03521_ch_T0000206;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=intron:HG03521_ch_T0000206:2;Name=LINC00279;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8334643	8334718	.	+	.	source_transcript=hg002_chrY_paternal_130.1;source_transcript_name=hg002_chrY_paternal_130.1;source_gene=hg002_chrY_paternal_130;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_130;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_130.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_130.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00279;alternative_source_transcripts=hg002_chrY_paternal_130.1,hg002_chrY_paternal_130.1;transcript_id=HG03521_ch_T0000206;gene_id=HG03521_ch_G0000064;Parent=HG03521_ch_T0000206;transcript_name=hg002_chrY_paternal_130.1;gene_name=LINC00279;ID=exon:HG03521_ch_T0000206:3;Name=LINC00279;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8349630	8350471	.	+	.	source_gene_common_name=LOC107987340;source_gene=hg002_chrY_paternal_131;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;gene_id=HG03521_ch_G0000065;gene_biotype=lncRNA;gene_name=LOC107987340;gene_sources=liftoff;ID=HG03521_ch_G0000065;Name=LOC107987340
HG03521_chrY	CAT	transcript	8349630	8350471	1000	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03521_ch_T0000207;gene_id=HG03521_ch_G0000065;Parent=HG03521_ch_G0000065;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=HG03521_ch_T0000207;Name=LOC107987340
HG03521_chrY	CAT	exon	8349630	8349751	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03521_ch_T0000207;gene_id=HG03521_ch_G0000065;Parent=HG03521_ch_T0000207;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG03521_ch_T0000207:0;Name=LOC107987340;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8349752	8350086	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03521_ch_T0000207;gene_id=HG03521_ch_G0000065;Parent=HG03521_ch_T0000207;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=intron:HG03521_ch_T0000207:0;Name=LOC107987340;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8350087	8350471	.	+	.	source_transcript=hg002_chrY_paternal_131.1;source_transcript_name=hg002_chrY_paternal_131.1;source_gene=hg002_chrY_paternal_131;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_131;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_131.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_131.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987340;alternative_source_transcripts=hg002_chrY_paternal_131.1,hg002_chrY_paternal_131.1;transcript_id=HG03521_ch_T0000207;gene_id=HG03521_ch_G0000065;Parent=HG03521_ch_T0000207;transcript_name=hg002_chrY_paternal_131.1;gene_name=LOC107987340;ID=exon:HG03521_ch_T0000207:1;Name=LOC107987340;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8372959	8373467	.	-	.	source_gene_common_name=TTTY18;source_gene=hg002_chrY_paternal_132;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;gene_id=HG03521_ch_G0000066;gene_biotype=lncRNA;gene_name=TTTY18;gene_sources=liftoff;ID=HG03521_ch_G0000066;Name=TTTY18
HG03521_chrY	CAT	transcript	8372959	8373467	1000	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03521_ch_T0000208;gene_id=HG03521_ch_G0000066;Parent=HG03521_ch_G0000066;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=HG03521_ch_T0000208;Name=TTTY18
HG03521_chrY	CAT	exon	8372959	8373021	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03521_ch_T0000208;gene_id=HG03521_ch_G0000066;Parent=HG03521_ch_T0000208;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG03521_ch_T0000208:0;Name=TTTY18;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8373022	8373309	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03521_ch_T0000208;gene_id=HG03521_ch_G0000066;Parent=HG03521_ch_T0000208;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=intron:HG03521_ch_T0000208:0;Name=TTTY18;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8373310	8373467	.	-	.	source_transcript=hg002_chrY_paternal_132.1;source_transcript_name=hg002_chrY_paternal_132.1;source_gene=hg002_chrY_paternal_132;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_132;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_132.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_132.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY18;alternative_source_transcripts=hg002_chrY_paternal_132.1,hg002_chrY_paternal_132.1;transcript_id=HG03521_ch_T0000208;gene_id=HG03521_ch_G0000066;Parent=HG03521_ch_T0000208;transcript_name=hg002_chrY_paternal_132.1;gene_name=TTTY18;ID=exon:HG03521_ch_T0000208:1;Name=TTTY18;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8383486	8384907	.	-	.	source_gene_common_name=LOC105377234;source_gene=hg002_chrY_paternal_133;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;gene_id=HG03521_ch_G0000067;gene_biotype=lncRNA;gene_name=LOC105377234;gene_sources=liftoff;ID=HG03521_ch_G0000067;Name=LOC105377234
HG03521_chrY	CAT	transcript	8383486	8384907	1000	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03521_ch_T0000209;gene_id=HG03521_ch_G0000067;Parent=HG03521_ch_G0000067;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=HG03521_ch_T0000209;Name=LOC105377234
HG03521_chrY	CAT	exon	8383486	8383572	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03521_ch_T0000209;gene_id=HG03521_ch_G0000067;Parent=HG03521_ch_T0000209;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG03521_ch_T0000209:0;Name=LOC105377234;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8383573	8384056	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03521_ch_T0000209;gene_id=HG03521_ch_G0000067;Parent=HG03521_ch_T0000209;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG03521_ch_T0000209:0;Name=LOC105377234;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8384057	8384134	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03521_ch_T0000209;gene_id=HG03521_ch_G0000067;Parent=HG03521_ch_T0000209;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG03521_ch_T0000209:1;Name=LOC105377234;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8384135	8384715	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03521_ch_T0000209;gene_id=HG03521_ch_G0000067;Parent=HG03521_ch_T0000209;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=intron:HG03521_ch_T0000209:1;Name=LOC105377234;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8384716	8384907	.	-	.	source_transcript=hg002_chrY_paternal_133.1;source_transcript_name=hg002_chrY_paternal_133.1;source_gene=hg002_chrY_paternal_133;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_133;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_133.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_133.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377234;alternative_source_transcripts=hg002_chrY_paternal_133.1,hg002_chrY_paternal_133.1;transcript_id=HG03521_ch_T0000209;gene_id=HG03521_ch_G0000067;Parent=HG03521_ch_T0000209;transcript_name=hg002_chrY_paternal_133.1;gene_name=LOC105377234;ID=exon:HG03521_ch_T0000209:2;Name=LOC105377234;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8394080	8394891	.	+	.	source_gene_common_name=TTTY19;source_gene=hg002_chrY_paternal_134;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;gene_id=HG03521_ch_G0000068;gene_biotype=lncRNA;gene_name=TTTY19;gene_sources=liftoff;ID=HG03521_ch_G0000068;Name=TTTY19
HG03521_chrY	CAT	transcript	8394080	8394891	1000	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03521_ch_T0000210;gene_id=HG03521_ch_G0000068;Parent=HG03521_ch_G0000068;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=HG03521_ch_T0000210;Name=TTTY19
HG03521_chrY	CAT	exon	8394080	8394167	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03521_ch_T0000210;gene_id=HG03521_ch_G0000068;Parent=HG03521_ch_T0000210;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG03521_ch_T0000210:0;Name=TTTY19;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8394168	8394710	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03521_ch_T0000210;gene_id=HG03521_ch_G0000068;Parent=HG03521_ch_T0000210;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=intron:HG03521_ch_T0000210:0;Name=TTTY19;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8394711	8394891	.	+	.	source_transcript=hg002_chrY_paternal_134.1;source_transcript_name=hg002_chrY_paternal_134.1;source_gene=hg002_chrY_paternal_134;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_134;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_134.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_134.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY19;alternative_source_transcripts=hg002_chrY_paternal_134.1,hg002_chrY_paternal_134.1;transcript_id=HG03521_ch_T0000210;gene_id=HG03521_ch_G0000068;Parent=HG03521_ch_T0000210;transcript_name=hg002_chrY_paternal_134.1;gene_name=TTTY19;ID=exon:HG03521_ch_T0000210:1;Name=TTTY19;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8411414	8413899	.	-	.	source_gene_common_name=LOC105377235;source_gene=hg002_chrY_paternal_135;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;gene_id=HG03521_ch_G0000069;gene_biotype=lncRNA;gene_name=LOC105377235;gene_sources=liftoff;ID=HG03521_ch_G0000069;Name=LOC105377235
HG03521_chrY	CAT	transcript	8411414	8413899	1000	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03521_ch_T0000211;gene_id=HG03521_ch_G0000069;Parent=HG03521_ch_G0000069;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=HG03521_ch_T0000211;Name=LOC105377235
HG03521_chrY	CAT	exon	8411414	8411697	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03521_ch_T0000211;gene_id=HG03521_ch_G0000069;Parent=HG03521_ch_T0000211;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03521_ch_T0000211:0;Name=LOC105377235;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8411698	8411794	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03521_ch_T0000211;gene_id=HG03521_ch_G0000069;Parent=HG03521_ch_T0000211;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG03521_ch_T0000211:0;Name=LOC105377235;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8411795	8411890	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03521_ch_T0000211;gene_id=HG03521_ch_G0000069;Parent=HG03521_ch_T0000211;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03521_ch_T0000211:1;Name=LOC105377235;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8411891	8411980	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03521_ch_T0000211;gene_id=HG03521_ch_G0000069;Parent=HG03521_ch_T0000211;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG03521_ch_T0000211:1;Name=LOC105377235;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8411981	8412243	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03521_ch_T0000211;gene_id=HG03521_ch_G0000069;Parent=HG03521_ch_T0000211;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03521_ch_T0000211:2;Name=LOC105377235;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8412244	8413711	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03521_ch_T0000211;gene_id=HG03521_ch_G0000069;Parent=HG03521_ch_T0000211;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=intron:HG03521_ch_T0000211:2;Name=LOC105377235;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8413712	8413899	.	-	.	source_transcript=hg002_chrY_paternal_135.1;source_transcript_name=hg002_chrY_paternal_135.1;source_gene=hg002_chrY_paternal_135;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_135;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_135.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_135.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377235;alternative_source_transcripts=hg002_chrY_paternal_135.1,hg002_chrY_paternal_135.1;transcript_id=HG03521_ch_T0000211;gene_id=HG03521_ch_G0000069;Parent=HG03521_ch_T0000211;transcript_name=hg002_chrY_paternal_135.1;gene_name=LOC105377235;ID=exon:HG03521_ch_T0000211:3;Name=LOC105377235;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8472921	8506989	.	-	.	source_gene_common_name=TTTY11;source_gene=hg002_chrY_paternal_136;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;gene_id=HG03521_ch_G0000070;gene_biotype=lncRNA;gene_name=TTTY11;gene_sources=liftoff;ID=HG03521_ch_G0000070;Name=TTTY11
HG03521_chrY	CAT	transcript	8472921	8506989	1000	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03521_ch_T0000212;gene_id=HG03521_ch_G0000070;Parent=HG03521_ch_G0000070;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=HG03521_ch_T0000212;Name=TTTY11
HG03521_chrY	CAT	exon	8472921	8473014	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03521_ch_T0000212;gene_id=HG03521_ch_G0000070;Parent=HG03521_ch_T0000212;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03521_ch_T0000212:0;Name=TTTY11;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8473015	8473495	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03521_ch_T0000212;gene_id=HG03521_ch_G0000070;Parent=HG03521_ch_T0000212;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03521_ch_T0000212:0;Name=TTTY11;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8473496	8473811	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03521_ch_T0000212;gene_id=HG03521_ch_G0000070;Parent=HG03521_ch_T0000212;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03521_ch_T0000212:1;Name=TTTY11;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8473812	8478607	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03521_ch_T0000212;gene_id=HG03521_ch_G0000070;Parent=HG03521_ch_T0000212;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03521_ch_T0000212:1;Name=TTTY11;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8478608	8478910	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03521_ch_T0000212;gene_id=HG03521_ch_G0000070;Parent=HG03521_ch_T0000212;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03521_ch_T0000212:2;Name=TTTY11;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8478911	8484468	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03521_ch_T0000212;gene_id=HG03521_ch_G0000070;Parent=HG03521_ch_T0000212;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03521_ch_T0000212:2;Name=TTTY11;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8484469	8484552	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03521_ch_T0000212;gene_id=HG03521_ch_G0000070;Parent=HG03521_ch_T0000212;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03521_ch_T0000212:3;Name=TTTY11;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8484553	8506952	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03521_ch_T0000212;gene_id=HG03521_ch_G0000070;Parent=HG03521_ch_T0000212;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=intron:HG03521_ch_T0000212:3;Name=TTTY11;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8506953	8506989	.	-	.	source_transcript=hg002_chrY_paternal_136.1;source_transcript_name=hg002_chrY_paternal_136.1;source_gene=hg002_chrY_paternal_136;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_136;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_136.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_136.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY11;alternative_source_transcripts=hg002_chrY_paternal_136.1,hg002_chrY_paternal_136.1;transcript_id=HG03521_ch_T0000212;gene_id=HG03521_ch_G0000070;Parent=HG03521_ch_T0000212;transcript_name=hg002_chrY_paternal_136.1;gene_name=TTTY11;ID=exon:HG03521_ch_T0000212:4;Name=TTTY11;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8904695	8909559	.	+	.	source_gene_common_name=LOC105379264;source_gene=hg002_chrY_paternal_145;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;gene_id=HG03521_ch_G0000071;gene_biotype=lncRNA;gene_name=LOC105379264;gene_sources=liftoff;ID=HG03521_ch_G0000071;Name=LOC105379264
HG03521_chrY	CAT	transcript	8904695	8909559	1000	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03521_ch_T0000213;gene_id=HG03521_ch_G0000071;Parent=HG03521_ch_G0000071;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=HG03521_ch_T0000213;Name=LOC105379264
HG03521_chrY	CAT	exon	8904695	8904769	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03521_ch_T0000213;gene_id=HG03521_ch_G0000071;Parent=HG03521_ch_T0000213;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03521_ch_T0000213:0;Name=LOC105379264;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8904770	8904923	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03521_ch_T0000213;gene_id=HG03521_ch_G0000071;Parent=HG03521_ch_T0000213;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG03521_ch_T0000213:0;Name=LOC105379264;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8904924	8905028	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03521_ch_T0000213;gene_id=HG03521_ch_G0000071;Parent=HG03521_ch_T0000213;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03521_ch_T0000213:1;Name=LOC105379264;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8905029	8907090	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03521_ch_T0000213;gene_id=HG03521_ch_G0000071;Parent=HG03521_ch_T0000213;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG03521_ch_T0000213:1;Name=LOC105379264;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8907091	8907166	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03521_ch_T0000213;gene_id=HG03521_ch_G0000071;Parent=HG03521_ch_T0000213;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03521_ch_T0000213:2;Name=LOC105379264;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8907167	8909475	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03521_ch_T0000213;gene_id=HG03521_ch_G0000071;Parent=HG03521_ch_T0000213;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=intron:HG03521_ch_T0000213:2;Name=LOC105379264;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8909476	8909559	.	+	.	source_transcript=hg002_chrY_paternal_145.1;source_transcript_name=hg002_chrY_paternal_145.1;source_gene=hg002_chrY_paternal_145;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_145;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_145.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_145.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379264;alternative_source_transcripts=hg002_chrY_paternal_145.1,hg002_chrY_paternal_145.1;transcript_id=HG03521_ch_T0000213;gene_id=HG03521_ch_G0000071;Parent=HG03521_ch_T0000213;transcript_name=hg002_chrY_paternal_145.1;gene_name=LOC105379264;ID=exon:HG03521_ch_T0000213:3;Name=LOC105379264;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8914248	8922794	.	+	.	source_gene_common_name=LOC105379265;source_gene=hg002_chrY_paternal_146;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;gene_id=HG03521_ch_G0000072;gene_biotype=lncRNA;gene_name=LOC105379265;gene_sources=liftoff;ID=HG03521_ch_G0000072;Name=LOC105379265
HG03521_chrY	CAT	transcript	8914248	8922794	1000	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03521_ch_T0000214;gene_id=HG03521_ch_G0000072;Parent=HG03521_ch_G0000072;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=HG03521_ch_T0000214;Name=LOC105379265
HG03521_chrY	CAT	exon	8914248	8914803	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03521_ch_T0000214;gene_id=HG03521_ch_G0000072;Parent=HG03521_ch_T0000214;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03521_ch_T0000214:0;Name=LOC105379265;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8914804	8915911	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03521_ch_T0000214;gene_id=HG03521_ch_G0000072;Parent=HG03521_ch_T0000214;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG03521_ch_T0000214:0;Name=LOC105379265;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8915912	8916053	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03521_ch_T0000214;gene_id=HG03521_ch_G0000072;Parent=HG03521_ch_T0000214;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03521_ch_T0000214:1;Name=LOC105379265;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8916054	8918197	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03521_ch_T0000214;gene_id=HG03521_ch_G0000072;Parent=HG03521_ch_T0000214;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG03521_ch_T0000214:1;Name=LOC105379265;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8918198	8918284	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03521_ch_T0000214;gene_id=HG03521_ch_G0000072;Parent=HG03521_ch_T0000214;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03521_ch_T0000214:2;Name=LOC105379265;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8918285	8922665	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03521_ch_T0000214;gene_id=HG03521_ch_G0000072;Parent=HG03521_ch_T0000214;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=intron:HG03521_ch_T0000214:2;Name=LOC105379265;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8922666	8922794	.	+	.	source_transcript=hg002_chrY_paternal_146.1;source_transcript_name=hg002_chrY_paternal_146.1;source_gene=hg002_chrY_paternal_146;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_146;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_146.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_146.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379265;alternative_source_transcripts=hg002_chrY_paternal_146.1,hg002_chrY_paternal_146.1;transcript_id=HG03521_ch_T0000214;gene_id=HG03521_ch_G0000072;Parent=HG03521_ch_T0000214;transcript_name=hg002_chrY_paternal_146.1;gene_name=LOC105379265;ID=exon:HG03521_ch_T0000214:3;Name=LOC105379265;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8928828	8931079	.	+	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_147;alternative_source_transcripts=hg002_chrY_paternal_147.1;gene_id=HG03521_ch_G0000073;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG03521_ch_G0000073;Name=LOC105379266
HG03521_chrY	CAT	transcript	8928828	8931079	1000	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000215;gene_id=HG03521_ch_G0000073;Parent=HG03521_ch_G0000073;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=HG03521_ch_T0000215;Name=LOC105379266
HG03521_chrY	CAT	exon	8928828	8929112	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000215;gene_id=HG03521_ch_G0000073;Parent=HG03521_ch_T0000215;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG03521_ch_T0000215:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8929113	8929797	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000215;gene_id=HG03521_ch_G0000073;Parent=HG03521_ch_T0000215;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=intron:HG03521_ch_T0000215:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8929798	8931079	.	+	.	source_transcript=hg002_chrY_paternal_147.1;source_transcript_name=hg002_chrY_paternal_147.1;source_gene=hg002_chrY_paternal_147;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_147;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_147.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_147.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_147.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000215;gene_id=HG03521_ch_G0000073;Parent=HG03521_ch_T0000215;transcript_name=hg002_chrY_paternal_147.1;gene_name=LOC105379266;ID=exon:HG03521_ch_T0000215:1;Name=LOC105379266;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8932235	8944465	.	+	.	source_gene_common_name=LOC105379267;source_gene=hg002_chrY_paternal_148;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;gene_id=HG03521_ch_G0000074;gene_biotype=lncRNA;gene_name=LOC105379267;gene_sources=liftoff;ID=HG03521_ch_G0000074;Name=LOC105379267
HG03521_chrY	CAT	transcript	8932235	8944465	1000	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03521_ch_T0000216;gene_id=HG03521_ch_G0000074;Parent=HG03521_ch_G0000074;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=HG03521_ch_T0000216;Name=LOC105379267
HG03521_chrY	CAT	exon	8932235	8932406	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03521_ch_T0000216;gene_id=HG03521_ch_G0000074;Parent=HG03521_ch_T0000216;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG03521_ch_T0000216:0;Name=LOC105379267;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8932407	8933651	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03521_ch_T0000216;gene_id=HG03521_ch_G0000074;Parent=HG03521_ch_T0000216;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG03521_ch_T0000216:0;Name=LOC105379267;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8933652	8933726	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03521_ch_T0000216;gene_id=HG03521_ch_G0000074;Parent=HG03521_ch_T0000216;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG03521_ch_T0000216:1;Name=LOC105379267;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8933727	8944394	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03521_ch_T0000216;gene_id=HG03521_ch_G0000074;Parent=HG03521_ch_T0000216;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=intron:HG03521_ch_T0000216:1;Name=LOC105379267;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8944395	8944465	.	+	.	source_transcript=hg002_chrY_paternal_148.1;source_transcript_name=hg002_chrY_paternal_148.1;source_gene=hg002_chrY_paternal_148;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_148;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_148.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_148.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379267;alternative_source_transcripts=hg002_chrY_paternal_148.1,hg002_chrY_paternal_148.1;transcript_id=HG03521_ch_T0000216;gene_id=HG03521_ch_G0000074;Parent=HG03521_ch_T0000216;transcript_name=hg002_chrY_paternal_148.1;gene_name=LOC105379267;ID=exon:HG03521_ch_T0000216:2;Name=LOC105379267;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8956913	8962726	.	-	.	source_gene_common_name=RBMY1A3P;source_gene=hg002_chrY_paternal_149;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;gene_id=HG03521_ch_G0000075;gene_biotype=transcribed_pseudogene;gene_name=RBMY1A3P;gene_sources=liftoff;ID=HG03521_ch_G0000075;Name=RBMY1A3P
HG03521_chrY	CAT	transcript	8956913	8962726	1000	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03521_ch_T0000217;gene_id=HG03521_ch_G0000075;Parent=HG03521_ch_G0000075;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=HG03521_ch_T0000217;Name=RBMY1A3P
HG03521_chrY	CAT	exon	8956913	8956943	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03521_ch_T0000217;gene_id=HG03521_ch_G0000075;Parent=HG03521_ch_T0000217;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03521_ch_T0000217:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8956944	8958843	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03521_ch_T0000217;gene_id=HG03521_ch_G0000075;Parent=HG03521_ch_T0000217;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG03521_ch_T0000217:0;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8958844	8959021	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03521_ch_T0000217;gene_id=HG03521_ch_G0000075;Parent=HG03521_ch_T0000217;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03521_ch_T0000217:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8959022	8962036	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03521_ch_T0000217;gene_id=HG03521_ch_G0000075;Parent=HG03521_ch_T0000217;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG03521_ch_T0000217:1;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8962037	8962140	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03521_ch_T0000217;gene_id=HG03521_ch_G0000075;Parent=HG03521_ch_T0000217;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03521_ch_T0000217:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8962141	8962612	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03521_ch_T0000217;gene_id=HG03521_ch_G0000075;Parent=HG03521_ch_T0000217;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=intron:HG03521_ch_T0000217:2;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8962613	8962726	.	-	.	source_transcript=hg002_chrY_paternal_149.1;source_transcript_name=hg002_chrY_paternal_149.1;source_gene=hg002_chrY_paternal_149;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_149;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_149.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_149.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A3P;alternative_source_transcripts=hg002_chrY_paternal_149.1,hg002_chrY_paternal_149.1;transcript_id=HG03521_ch_T0000217;gene_id=HG03521_ch_G0000075;Parent=HG03521_ch_T0000217;transcript_name=hg002_chrY_paternal_149.1;gene_name=RBMY1A3P;ID=exon:HG03521_ch_T0000217:3;Name=RBMY1A3P;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8969732	8974684	.	-	.	source_gene_common_name=TTTY20;source_gene=hg002_chrY_paternal_151;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;gene_id=HG03521_ch_G0000076;gene_biotype=lncRNA;gene_name=TTTY20;gene_sources=liftoff;ID=HG03521_ch_G0000076;Name=TTTY20
HG03521_chrY	CAT	transcript	8969732	8974684	1000	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03521_ch_T0000218;gene_id=HG03521_ch_G0000076;Parent=HG03521_ch_G0000076;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=HG03521_ch_T0000218;Name=TTTY20
HG03521_chrY	CAT	exon	8969732	8969908	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03521_ch_T0000218;gene_id=HG03521_ch_G0000076;Parent=HG03521_ch_T0000218;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG03521_ch_T0000218:0;Name=TTTY20;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8969909	8974602	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03521_ch_T0000218;gene_id=HG03521_ch_G0000076;Parent=HG03521_ch_T0000218;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=intron:HG03521_ch_T0000218:0;Name=TTTY20;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8974603	8974684	.	-	.	source_transcript=hg002_chrY_paternal_151.1;source_transcript_name=hg002_chrY_paternal_151.1;source_gene=hg002_chrY_paternal_151;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_151;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_151.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_151.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY20;alternative_source_transcripts=hg002_chrY_paternal_151.1,hg002_chrY_paternal_151.1;transcript_id=HG03521_ch_T0000218;gene_id=HG03521_ch_G0000076;Parent=HG03521_ch_T0000218;transcript_name=hg002_chrY_paternal_151.1;gene_name=TTTY20;ID=exon:HG03521_ch_T0000218:1;Name=TTTY20;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8977316	8980112	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_168;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;gene_id=HG03521_ch_G0000077;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000077;Name=TSPY10
HG03521_chrY	CAT	transcript	8977316	8980112	100	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_G0000077;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG03521_ch_T0000219;Name=TSPY10
HG03521_chrY	CAT	exon	8977316	8977847	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000219:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8977362	8977847	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000219:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	8977362	8977364	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000219;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8977848	8978454	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000219:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978455	8978532	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000219:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8978455	8978532	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000219:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8978533	8978660	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000219:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978661	8978772	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000219:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8978661	8978772	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000219:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8978773	8978873	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000219:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978874	8979019	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000219:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8978874	8979019	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000219:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8979020	8979125	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000219:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8979126	8979207	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000219:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8979126	8979207	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000219:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8979208	8979901	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000219:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8979902	8980112	.	+	.	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000219:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8979902	8979924	.	+	2	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000219:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	8979922	8979924	.	+	0	source_transcript=hg002_chrY_paternal_168.1;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.1,hg002_chrY_paternal_152.1;transcript_id=HG03521_ch_T0000219;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000219;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000219;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	8977316	8980112	100	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_G0000077;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG03521_ch_T0000220;Name=TSPY10
HG03521_chrY	CAT	exon	8977316	8977847	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000220:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8977362	8977847	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000220:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	8977362	8977364	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000220;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8977848	8978454	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000220:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978455	8978532	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000220:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8978455	8978532	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000220:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8978533	8978660	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000220:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978661	8978772	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000220:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8978661	8978772	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000220:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8978773	8978873	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000220:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978874	8979019	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000220:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8978874	8979019	.	+	2	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000220:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8979020	8979114	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000220:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8979115	8979207	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000220:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8979115	8979177	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000220:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	8979175	8979177	.	+	0	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000220;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8979208	8979901	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000220:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8979902	8980112	.	+	.	source_transcript=hg002_chrY_paternal_168.2;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.2,hg002_chrY_paternal_152.2;transcript_id=HG03521_ch_T0000220;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000220;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000220:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	8977316	8980112	100	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_G0000077;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=HG03521_ch_T0000221;Name=TSPY10
HG03521_chrY	CAT	exon	8977316	8977847	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000221:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8977362	8977847	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000221:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	8977362	8977364	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000221;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8977848	8978454	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000221:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978455	8978532	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000221:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8978455	8978532	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000221:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8978533	8978660	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000221:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978661	8978772	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000221:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8978661	8978772	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000221:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8978773	8978880	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000221:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978881	8979019	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000221:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8978881	8979019	.	+	2	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000221:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8979020	8979125	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000221:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8979126	8979207	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000221:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8979126	8979177	.	+	1	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000221:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	8979175	8979177	.	+	0	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000221;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8979208	8979901	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000221:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8979902	8980112	.	+	.	source_transcript=hg002_chrY_paternal_168.3;source_transcript_name=hg002_chrY_paternal_168.4;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_168.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.3,hg002_chrY_paternal_152.3;transcript_id=HG03521_ch_T0000221;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000221;transcript_name=hg002_chrY_paternal_168.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000221:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	8977316	8980112	1000	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_G0000077;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=HG03521_ch_T0000222;Name=TSPY10
HG03521_chrY	CAT	exon	8977316	8977847	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000222:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8977848	8978454	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000222:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978455	8978532	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000222:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8978533	8978660	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000222:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978661	8978772	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000222:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8978773	8978880	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000222:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8978881	8979019	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000222:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8979020	8979114	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000222:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8979115	8979207	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000222:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8979208	8979901	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000222:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8979902	8980112	.	+	.	source_transcript=hg002_chrY_paternal_168.4;source_transcript_name=hg002_chrY_paternal_168.1;source_gene=hg002_chrY_paternal_168;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_168;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_168.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_168.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_152.4,hg002_chrY_paternal_152.4;transcript_id=HG03521_ch_T0000222;gene_id=HG03521_ch_G0000077;Parent=HG03521_ch_T0000222;transcript_name=hg002_chrY_paternal_168.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000222:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8989401	8995009	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_169;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;gene_id=HG03521_ch_G0000078;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03521_ch_G0000078;Name=FAM197Y3
HG03521_chrY	CAT	transcript	8989401	8995009	1000	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03521_ch_T0000223;gene_id=HG03521_ch_G0000078;Parent=HG03521_ch_G0000078;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000223;Name=FAM197Y3
HG03521_chrY	CAT	exon	8989401	8989460	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03521_ch_T0000223;gene_id=HG03521_ch_G0000078;Parent=HG03521_ch_T0000223;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000223:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8989461	8993010	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03521_ch_T0000223;gene_id=HG03521_ch_G0000078;Parent=HG03521_ch_T0000223;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000223:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8993011	8993169	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03521_ch_T0000223;gene_id=HG03521_ch_G0000078;Parent=HG03521_ch_T0000223;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000223:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8993170	8994675	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03521_ch_T0000223;gene_id=HG03521_ch_G0000078;Parent=HG03521_ch_T0000223;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000223:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8994676	8994821	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03521_ch_T0000223;gene_id=HG03521_ch_G0000078;Parent=HG03521_ch_T0000223;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000223:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8994822	8994907	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03521_ch_T0000223;gene_id=HG03521_ch_G0000078;Parent=HG03521_ch_T0000223;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000223:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8994908	8995009	.	-	.	source_transcript=hg002_chrY_paternal_169.1;source_transcript_name=hg002_chrY_paternal_169.1;source_gene=hg002_chrY_paternal_169;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_169;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_169.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_169.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_153.1,hg002_chrY_paternal_153.1;transcript_id=HG03521_ch_T0000223;gene_id=HG03521_ch_G0000078;Parent=HG03521_ch_T0000223;transcript_name=hg002_chrY_paternal_169.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000223:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	8997624	9000420	.	+	.	source_gene_common_name=TSPY8;source_gene=hg002_chrY_paternal_152;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;gene_id=HG03521_ch_G0000079;gene_biotype=protein_coding;gene_name=TSPY8;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000079;Name=TSPY8
HG03521_chrY	CAT	transcript	8997624	9000420	100	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_G0000079;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG03521_ch_T0000224;Name=TSPY8
HG03521_chrY	CAT	exon	8997624	8998155	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000224:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8997670	8998155	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000224:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	8997670	8997672	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG03521_ch_T0000224;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8998156	8998762	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000224:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8998763	8998840	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000224:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8998763	8998840	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000224:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8998841	8998968	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000224:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8998969	8999080	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000224:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8998969	8999080	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000224:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999081	8999181	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000224:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8999182	8999327	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000224:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8999182	8999327	.	+	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000224:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999328	8999433	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000224:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8999434	8999515	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000224:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8999434	8999515	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000224:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999516	9000209	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000224:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9000210	9000420	.	+	.	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000224:5;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9000210	9000232	.	+	2	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000224:5;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9000230	9000232	.	+	0	source_transcript=hg002_chrY_paternal_152.1;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.1,hg002_chrY_paternal_154.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000224;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000224;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG03521_ch_T0000224;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	8997624	9000420	100	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_G0000079;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG03521_ch_T0000225;Name=TSPY8
HG03521_chrY	CAT	exon	8997624	8998155	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000225:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8997670	8998155	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000225:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	8997670	8997672	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG03521_ch_T0000225;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8998156	8998762	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000225:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8998763	8998840	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000225:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8998763	8998840	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000225:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8998841	8998968	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000225:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8998969	8999080	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000225:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8998969	8999080	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000225:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999081	8999181	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000225:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8999182	8999327	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000225:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8999182	8999327	.	+	2	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000225:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999328	8999422	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000225:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8999423	8999515	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000225:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8999423	8999485	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000225:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	8999483	8999485	.	+	0	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG03521_ch_T0000225;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999516	9000209	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000225:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9000210	9000420	.	+	.	source_transcript=hg002_chrY_paternal_152.2;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.2,hg002_chrY_paternal_154.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000225;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000225;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000225:5;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	8997624	9000420	100	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_G0000079;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=HG03521_ch_T0000226;Name=TSPY8
HG03521_chrY	CAT	exon	8997624	8998155	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000226:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8997670	8998155	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000226:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	8997670	8997672	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=start_codon:HG03521_ch_T0000226;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8998156	8998762	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000226:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8998763	8998840	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000226:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8998763	8998840	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000226:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8998841	8998968	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000226:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8998969	8999080	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000226:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8998969	8999080	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000226:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999081	8999188	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000226:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8999189	8999327	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000226:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8999189	8999327	.	+	2	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000226:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999328	8999433	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000226:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8999434	8999515	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000226:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	8999434	8999485	.	+	1	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=CDS:HG03521_ch_T0000226:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	8999483	8999485	.	+	0	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=stop_codon:HG03521_ch_T0000226;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999516	9000209	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=intron:HG03521_ch_T0000226:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9000210	9000420	.	+	.	source_transcript=hg002_chrY_paternal_152.3;source_transcript_name=hg002_chrY_paternal_152.4;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_152.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.3,hg002_chrY_paternal_154.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000226;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000226;transcript_name=hg002_chrY_paternal_152.4;gene_name=TSPY8;ID=exon:HG03521_ch_T0000226:5;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	8997624	9000420	1000	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_G0000079;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=HG03521_ch_T0000227;Name=TSPY8
HG03521_chrY	CAT	exon	8997624	8998155	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03521_ch_T0000227:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8998156	8998762	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03521_ch_T0000227:0;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8998763	8998840	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03521_ch_T0000227:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8998841	8998968	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03521_ch_T0000227:1;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8998969	8999080	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03521_ch_T0000227:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999081	8999188	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03521_ch_T0000227:2;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8999189	8999327	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03521_ch_T0000227:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999328	8999422	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03521_ch_T0000227:3;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	8999423	8999515	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03521_ch_T0000227:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	8999516	9000209	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=intron:HG03521_ch_T0000227:4;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9000210	9000420	.	+	.	source_transcript=hg002_chrY_paternal_152.4;source_transcript_name=hg002_chrY_paternal_152.1;source_gene=hg002_chrY_paternal_152;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_152;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_152.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_152.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY8;alternative_source_transcripts=hg002_chrY_paternal_154.4,hg002_chrY_paternal_154.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000227;gene_id=HG03521_ch_G0000079;Parent=HG03521_ch_T0000227;transcript_name=hg002_chrY_paternal_152.1;gene_name=TSPY8;ID=exon:HG03521_ch_T0000227:5;Name=TSPY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9009730	9015331	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_155;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;gene_id=HG03521_ch_G0000080;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03521_ch_G0000080;Name=FAM197Y3
HG03521_chrY	CAT	transcript	9009730	9015331	1000	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03521_ch_T0000228;gene_id=HG03521_ch_G0000080;Parent=HG03521_ch_G0000080;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000228;Name=FAM197Y3
HG03521_chrY	CAT	exon	9009730	9009789	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03521_ch_T0000228;gene_id=HG03521_ch_G0000080;Parent=HG03521_ch_T0000228;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000228:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9009790	9013340	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03521_ch_T0000228;gene_id=HG03521_ch_G0000080;Parent=HG03521_ch_T0000228;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000228:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9013341	9013499	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03521_ch_T0000228;gene_id=HG03521_ch_G0000080;Parent=HG03521_ch_T0000228;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000228:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9013500	9014997	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03521_ch_T0000228;gene_id=HG03521_ch_G0000080;Parent=HG03521_ch_T0000228;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000228:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9014998	9015143	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03521_ch_T0000228;gene_id=HG03521_ch_G0000080;Parent=HG03521_ch_T0000228;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000228:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9015144	9015229	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03521_ch_T0000228;gene_id=HG03521_ch_G0000080;Parent=HG03521_ch_T0000228;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000228:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9015230	9015331	.	-	.	source_transcript=hg002_chrY_paternal_155.1;source_transcript_name=hg002_chrY_paternal_155.1;source_gene=hg002_chrY_paternal_155;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_155;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_155.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_155.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_155.1,hg002_chrY_paternal_155.1;transcript_id=HG03521_ch_T0000228;gene_id=HG03521_ch_G0000080;Parent=HG03521_ch_T0000228;transcript_name=hg002_chrY_paternal_155.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000228:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9017945	9020759	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_206;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;gene_id=HG03521_ch_G0000081;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG03521_ch_G0000081;Name=TSPY4
HG03521_chrY	CAT	transcript	9017945	9020759	100	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_G0000081;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG03521_ch_T0000229;Name=TSPY4
HG03521_chrY	CAT	exon	9017945	9018494	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000229:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9017991	9018494	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000229:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9017991	9017993	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000229;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9018495	9019101	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000229:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019102	9019179	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000229:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019102	9019179	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000229:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019180	9019307	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000229:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019308	9019419	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000229:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019308	9019419	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000229:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019420	9019520	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000229:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019521	9019666	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000229:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019521	9019666	.	+	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000229:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019667	9019772	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000229:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019773	9019854	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000229:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019773	9019854	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000229:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019855	9020548	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000229:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9020549	9020759	.	+	.	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000229:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9020549	9020571	.	+	2	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000229:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9020569	9020571	.	+	0	source_transcript=hg002_chrY_paternal_206.1;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.1,hg002_chrY_paternal_156.1;transcript_id=HG03521_ch_T0000229;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000229;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000229;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9017945	9020759	100	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_G0000081;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG03521_ch_T0000230;Name=TSPY4
HG03521_chrY	CAT	exon	9017945	9018494	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000230:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9017991	9018494	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000230:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9017991	9017993	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000230;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9018495	9019101	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000230:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019102	9019179	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000230:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019102	9019179	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000230:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019180	9019307	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000230:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019308	9019419	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000230:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019308	9019419	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000230:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019420	9019520	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000230:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019521	9019666	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000230:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019521	9019666	.	+	2	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000230:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019667	9019761	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000230:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019762	9019854	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000230:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019762	9019824	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000230:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9019822	9019824	.	+	0	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000230;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019855	9020548	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000230:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9020549	9020759	.	+	.	source_transcript=hg002_chrY_paternal_206.2;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.2,hg002_chrY_paternal_156.2;transcript_id=HG03521_ch_T0000230;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000230;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000230:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9017945	9020759	100	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_G0000081;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=HG03521_ch_T0000231;Name=TSPY4
HG03521_chrY	CAT	exon	9017945	9018494	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000231:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9017991	9018494	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000231:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9017991	9017993	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000231;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9018495	9019101	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000231:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019102	9019179	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000231:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019102	9019179	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000231:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019180	9019307	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000231:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019308	9019419	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000231:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019308	9019419	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000231:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019420	9019527	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000231:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019528	9019666	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000231:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019528	9019666	.	+	2	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000231:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019667	9019772	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000231:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019773	9019854	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000231:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9019773	9019824	.	+	1	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000231:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9019822	9019824	.	+	0	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000231;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019855	9020548	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000231:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9020549	9020759	.	+	.	source_transcript=hg002_chrY_paternal_206.3;source_transcript_name=hg002_chrY_paternal_206.4;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_206.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.3,hg002_chrY_paternal_156.3;transcript_id=HG03521_ch_T0000231;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000231;transcript_name=hg002_chrY_paternal_206.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000231:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9017945	9020759	1000	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_G0000081;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=HG03521_ch_T0000232;Name=TSPY4
HG03521_chrY	CAT	exon	9017945	9018494	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000232:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9018495	9019101	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000232:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019102	9019179	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000232:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019180	9019307	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000232:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019308	9019419	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000232:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019420	9019527	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000232:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019528	9019666	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000232:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019667	9019761	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000232:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9019762	9019854	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000232:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9019855	9020548	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000232:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9020549	9020759	.	+	.	source_transcript=hg002_chrY_paternal_206.4;source_transcript_name=hg002_chrY_paternal_206.1;source_gene=hg002_chrY_paternal_206;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_206;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_206.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_206.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_156.4,hg002_chrY_paternal_156.4;transcript_id=HG03521_ch_T0000232;gene_id=HG03521_ch_G0000081;Parent=HG03521_ch_T0000232;transcript_name=hg002_chrY_paternal_206.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000232:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9030029	9035713	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_157;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;gene_id=HG03521_ch_G0000082;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000082;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9030029	9035713	1000	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03521_ch_T0000233;gene_id=HG03521_ch_G0000082;Parent=HG03521_ch_G0000082;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000233;Name=FAM197Y2
HG03521_chrY	CAT	exon	9030029	9030088	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03521_ch_T0000233;gene_id=HG03521_ch_G0000082;Parent=HG03521_ch_T0000233;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000233:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9030089	9033638	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03521_ch_T0000233;gene_id=HG03521_ch_G0000082;Parent=HG03521_ch_T0000233;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000233:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9033639	9033797	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03521_ch_T0000233;gene_id=HG03521_ch_G0000082;Parent=HG03521_ch_T0000233;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000233:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9033798	9035290	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03521_ch_T0000233;gene_id=HG03521_ch_G0000082;Parent=HG03521_ch_T0000233;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000233:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9035291	9035436	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03521_ch_T0000233;gene_id=HG03521_ch_G0000082;Parent=HG03521_ch_T0000233;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000233:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9035437	9035522	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03521_ch_T0000233;gene_id=HG03521_ch_G0000082;Parent=HG03521_ch_T0000233;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000233:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9035523	9035713	.	-	.	source_transcript=hg002_chrY_paternal_157.1;source_transcript_name=hg002_chrY_paternal_157.1;source_gene=hg002_chrY_paternal_157;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_157;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_157.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_157.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_157.1,hg002_chrY_paternal_157.1;transcript_id=HG03521_ch_T0000233;gene_id=HG03521_ch_G0000082;Parent=HG03521_ch_T0000233;transcript_name=hg002_chrY_paternal_157.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000233:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9038238	9041034	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_158;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;gene_id=HG03521_ch_G0000083;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000083;Name=TSPY1
HG03521_chrY	CAT	transcript	9038238	9041034	100	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03521_ch_T0000234;Name=TSPY1
HG03521_chrY	CAT	exon	9038238	9038769	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000234:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9038284	9038769	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000234:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9038284	9038286	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000234;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9038770	9039376	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000234:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039377	9039454	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000234:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039377	9039454	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000234:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039455	9039582	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000234:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039583	9039694	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000234:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039583	9039694	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000234:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039695	9039795	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000234:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039796	9039941	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000234:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039796	9039941	.	+	2	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000234:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039942	9040036	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000234:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9040037	9040129	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000234:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9040037	9040099	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000234:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9040097	9040099	.	+	0	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000234;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9040130	9040823	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000234:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9040824	9041034	.	+	.	source_transcript=hg002_chrY_paternal_158.1;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.1,hg002_chrY_paternal_158.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000234;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000234;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000234:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9038238	9041034	100	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03521_ch_T0000235;Name=TSPY1
HG03521_chrY	CAT	exon	9038238	9038370	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000235:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9038284	9038370	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000235:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9038284	9038286	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000235;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9038371	9038631	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000235:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9038632	9038769	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000235:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9038632	9038769	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000235:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9038770	9039376	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000235:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039377	9039454	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000235:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039377	9039454	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000235:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039455	9039582	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000235:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039583	9039694	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000235:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039583	9039694	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000235:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039695	9039795	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000235:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039796	9039941	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000235:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039796	9039941	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000235:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039942	9040047	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000235:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9040048	9040129	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000235:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9040048	9040129	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000235:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9040130	9040823	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000235:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9040824	9041034	.	+	.	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000235:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9040824	9040846	.	+	2	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000235:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9040844	9040846	.	+	0	source_transcript=hg002_chrY_paternal_158.2;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.2,hg002_chrY_paternal_158.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000235;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000235;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000235;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9038238	9041034	100	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03521_ch_T0000236;Name=TSPY1
HG03521_chrY	CAT	exon	9038238	9038769	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000236:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9038284	9038769	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000236:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9038284	9038286	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000236;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9038770	9039376	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000236:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039377	9039454	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000236:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039377	9039454	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000236:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039455	9039582	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000236:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039583	9039694	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000236:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039583	9039694	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000236:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039695	9039795	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000236:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039796	9039941	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000236:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039796	9039941	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000236:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039942	9040047	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000236:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9040048	9040129	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000236:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9040048	9040129	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000236:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9040130	9040823	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000236:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9040824	9041034	.	+	.	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000236:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9040824	9040846	.	+	2	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000236:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9040844	9040846	.	+	0	source_transcript=hg002_chrY_paternal_158.3;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.3,hg002_chrY_paternal_158.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000236;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000236;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000236;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9038238	9041034	100	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_G0000083;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=HG03521_ch_T0000237;Name=TSPY1
HG03521_chrY	CAT	exon	9038238	9038769	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000237:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9038284	9038769	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000237:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9038284	9038286	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000237;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9038770	9039376	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000237:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039377	9039454	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000237:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039377	9039454	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000237:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039455	9039582	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000237:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039583	9039694	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000237:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039583	9039694	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000237:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039695	9039802	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000237:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039803	9039941	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000237:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9039803	9039941	.	+	2	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000237:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039942	9040047	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000237:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9040048	9040129	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000237:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9040048	9040099	.	+	1	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000237:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9040097	9040099	.	+	0	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000237;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9040130	9040823	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000237:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9040824	9041034	.	+	.	source_transcript=hg002_chrY_paternal_158.4;source_transcript_name=hg002_chrY_paternal_158.5;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_158.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.4,hg002_chrY_paternal_158.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000237;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000237;transcript_name=hg002_chrY_paternal_158.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000237:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9038238	9041034	1000	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_G0000083;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=HG03521_ch_T0000238;Name=TSPY1
HG03521_chrY	CAT	exon	9038238	9038769	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000238:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9038770	9039376	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000238:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039377	9039454	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000238:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039455	9039582	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000238:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039583	9039694	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000238:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039695	9039802	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000238:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9039803	9039941	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000238:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9039942	9040036	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000238:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9040037	9040129	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000238:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9040130	9040823	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000238:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9040824	9041034	.	+	.	source_transcript=hg002_chrY_paternal_158.5;source_transcript_name=hg002_chrY_paternal_158.1;source_gene=hg002_chrY_paternal_158;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_158;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_158.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_158.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_158.5,hg002_chrY_paternal_158.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000238;gene_id=HG03521_ch_G0000083;Parent=HG03521_ch_T0000238;transcript_name=hg002_chrY_paternal_158.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000238:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9050325	9056023	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_159;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;gene_id=HG03521_ch_G0000084;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000084;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9050325	9056023	1000	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03521_ch_T0000239;gene_id=HG03521_ch_G0000084;Parent=HG03521_ch_G0000084;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000239;Name=FAM197Y2
HG03521_chrY	CAT	exon	9050325	9050384	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03521_ch_T0000239;gene_id=HG03521_ch_G0000084;Parent=HG03521_ch_T0000239;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000239:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9050385	9053933	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03521_ch_T0000239;gene_id=HG03521_ch_G0000084;Parent=HG03521_ch_T0000239;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000239:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9053934	9054092	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03521_ch_T0000239;gene_id=HG03521_ch_G0000084;Parent=HG03521_ch_T0000239;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000239:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9054093	9055600	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03521_ch_T0000239;gene_id=HG03521_ch_G0000084;Parent=HG03521_ch_T0000239;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000239:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9055601	9055746	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03521_ch_T0000239;gene_id=HG03521_ch_G0000084;Parent=HG03521_ch_T0000239;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000239:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9055747	9055832	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03521_ch_T0000239;gene_id=HG03521_ch_G0000084;Parent=HG03521_ch_T0000239;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000239:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9055833	9056023	.	-	.	source_transcript=hg002_chrY_paternal_159.1;source_transcript_name=hg002_chrY_paternal_159.1;source_gene=hg002_chrY_paternal_159;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_159;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_159.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_159.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_159.1,hg002_chrY_paternal_159.1;transcript_id=HG03521_ch_T0000239;gene_id=HG03521_ch_G0000084;Parent=HG03521_ch_T0000239;transcript_name=hg002_chrY_paternal_159.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000239:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9058547	9061361	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_160;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;gene_id=HG03521_ch_G0000085;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000085;Name=TSPY4
HG03521_chrY	CAT	transcript	9058547	9061361	100	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_G0000085;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG03521_ch_T0000240;Name=TSPY4
HG03521_chrY	CAT	exon	9058547	9059096	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000240:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9058593	9059096	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000240:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9058593	9058595	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000240;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9059097	9059703	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000240:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9059704	9059781	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000240:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9059704	9059781	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000240:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9059782	9059909	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000240:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9059910	9060021	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000240:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9059910	9060021	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000240:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060022	9060122	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000240:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9060123	9060268	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000240:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9060123	9060268	.	+	2	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000240:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060269	9060374	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000240:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9060375	9060456	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000240:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9060375	9060456	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000240:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060457	9061150	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000240:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9061151	9061361	.	+	.	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000240:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9061151	9061173	.	+	2	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000240:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9061171	9061173	.	+	0	source_transcript=hg002_chrY_paternal_160.1;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.1,hg002_chrY_paternal_160.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000240;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000240;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000240;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9058547	9061361	100	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_G0000085;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG03521_ch_T0000241;Name=TSPY4
HG03521_chrY	CAT	exon	9058547	9059096	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000241:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9058593	9059096	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000241:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9058593	9058595	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000241;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9059097	9059703	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000241:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9059704	9059781	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000241:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9059704	9059781	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000241:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9059782	9059909	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000241:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9059910	9060021	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000241:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9059910	9060021	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000241:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060022	9060122	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000241:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9060123	9060268	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000241:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9060123	9060268	.	+	2	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000241:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060269	9060363	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000241:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9060364	9060456	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000241:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9060364	9060426	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000241:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9060424	9060426	.	+	0	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000241;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060457	9061150	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000241:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9061151	9061361	.	+	.	source_transcript=hg002_chrY_paternal_160.2;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.2,hg002_chrY_paternal_160.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000241;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000241;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000241:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9058547	9061361	100	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_G0000085;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=HG03521_ch_T0000242;Name=TSPY4
HG03521_chrY	CAT	exon	9058547	9059096	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000242:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9058593	9059096	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000242:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9058593	9058595	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000242;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9059097	9059703	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000242:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9059704	9059781	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000242:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9059704	9059781	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000242:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9059782	9059909	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000242:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9059910	9060021	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000242:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9059910	9060021	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000242:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060022	9060129	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000242:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9060130	9060268	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000242:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9060130	9060268	.	+	2	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000242:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060269	9060374	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000242:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9060375	9060456	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000242:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9060375	9060426	.	+	1	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000242:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9060424	9060426	.	+	0	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000242;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060457	9061150	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000242:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9061151	9061361	.	+	.	source_transcript=hg002_chrY_paternal_160.3;source_transcript_name=hg002_chrY_paternal_160.4;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_160.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.3,hg002_chrY_paternal_160.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000242;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000242;transcript_name=hg002_chrY_paternal_160.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000242:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9058547	9061361	1000	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_G0000085;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=HG03521_ch_T0000243;Name=TSPY4
HG03521_chrY	CAT	exon	9058547	9059096	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000243:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9059097	9059703	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000243:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9059704	9059781	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000243:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9059782	9059909	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000243:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9059910	9060021	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000243:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060022	9060129	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000243:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9060130	9060268	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000243:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060269	9060363	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000243:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9060364	9060456	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000243:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9060457	9061150	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000243:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9061151	9061361	.	+	.	source_transcript=hg002_chrY_paternal_160.4;source_transcript_name=hg002_chrY_paternal_160.1;source_gene=hg002_chrY_paternal_160;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_160;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_160.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_160.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_160.4,hg002_chrY_paternal_160.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000243;gene_id=HG03521_ch_G0000085;Parent=HG03521_ch_T0000243;transcript_name=hg002_chrY_paternal_160.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000243:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9070670	9076272	.	-	.	source_gene_common_name=FAM197Y8;source_gene=hg002_chrY_paternal_161;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;gene_id=HG03521_ch_G0000086;gene_biotype=lncRNA;gene_name=FAM197Y8;gene_sources=liftoff;ID=HG03521_ch_G0000086;Name=FAM197Y8
HG03521_chrY	CAT	transcript	9070670	9076272	1000	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03521_ch_T0000244;gene_id=HG03521_ch_G0000086;Parent=HG03521_ch_G0000086;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=HG03521_ch_T0000244;Name=FAM197Y8
HG03521_chrY	CAT	exon	9070670	9070729	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03521_ch_T0000244;gene_id=HG03521_ch_G0000086;Parent=HG03521_ch_T0000244;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03521_ch_T0000244:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9070730	9074279	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03521_ch_T0000244;gene_id=HG03521_ch_G0000086;Parent=HG03521_ch_T0000244;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG03521_ch_T0000244:0;Name=FAM197Y8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9074280	9074438	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03521_ch_T0000244;gene_id=HG03521_ch_G0000086;Parent=HG03521_ch_T0000244;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03521_ch_T0000244:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9074439	9075938	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03521_ch_T0000244;gene_id=HG03521_ch_G0000086;Parent=HG03521_ch_T0000244;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG03521_ch_T0000244:1;Name=FAM197Y8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9075939	9076084	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03521_ch_T0000244;gene_id=HG03521_ch_G0000086;Parent=HG03521_ch_T0000244;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03521_ch_T0000244:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9076085	9076170	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03521_ch_T0000244;gene_id=HG03521_ch_G0000086;Parent=HG03521_ch_T0000244;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=intron:HG03521_ch_T0000244:2;Name=FAM197Y8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9076171	9076272	.	-	.	source_transcript=hg002_chrY_paternal_161.1;source_transcript_name=hg002_chrY_paternal_161.1;source_gene=hg002_chrY_paternal_161;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_161;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_161.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_161.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y8;alternative_source_transcripts=hg002_chrY_paternal_161.1,hg002_chrY_paternal_161.1;transcript_id=HG03521_ch_T0000244;gene_id=HG03521_ch_G0000086;Parent=HG03521_ch_T0000244;transcript_name=hg002_chrY_paternal_161.1;gene_name=FAM197Y8;ID=exon:HG03521_ch_T0000244:3;Name=FAM197Y8;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9078885	9081699	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_162;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;gene_id=HG03521_ch_G0000087;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000087;Name=TSPY9
HG03521_chrY	CAT	transcript	9078885	9081699	100	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_G0000087;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=HG03521_ch_T0000245;Name=TSPY9
HG03521_chrY	CAT	exon	9078885	9079434	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000245:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9078931	9079434	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000245:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9078931	9078933	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=start_codon:HG03521_ch_T0000245;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9079435	9080041	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000245:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9080042	9080119	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000245:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9080042	9080119	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000245:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9080120	9080247	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000245:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9080248	9080359	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000245:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9080248	9080359	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000245:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9080360	9080460	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000245:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9080461	9080606	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000245:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9080461	9080606	.	+	2	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000245:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9080607	9080712	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000245:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9080713	9080794	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000245:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9080713	9080794	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000245:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9080795	9081488	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000245:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9081489	9081699	.	+	.	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000245:5;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9081489	9081511	.	+	2	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000245:5;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9081509	9081511	.	+	0	source_transcript=hg002_chrY_paternal_162.1;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.1,hg002_chrY_paternal_162.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000245;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000245;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=stop_codon:HG03521_ch_T0000245;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9078885	9081699	100	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_G0000087;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=HG03521_ch_T0000246;Name=TSPY9
HG03521_chrY	CAT	exon	9078885	9079434	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000246:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9078931	9079434	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000246:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9078931	9078933	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=start_codon:HG03521_ch_T0000246;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9079435	9080041	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000246:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9080042	9080119	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000246:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9080042	9080119	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000246:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9080120	9080247	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000246:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9080248	9080359	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000246:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9080248	9080359	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000246:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9080360	9080460	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000246:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9080461	9080606	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000246:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9080461	9080606	.	+	2	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000246:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9080607	9080701	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000246:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9080702	9080794	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000246:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9080702	9080764	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000246:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9080762	9080764	.	+	0	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=stop_codon:HG03521_ch_T0000246;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9080795	9081488	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000246:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9081489	9081699	.	+	.	source_transcript=hg002_chrY_paternal_162.2;source_transcript_name=hg002_chrY_paternal_162.2;source_gene=hg002_chrY_paternal_162;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_162;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_162.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_162.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_162.2,hg002_chrY_paternal_162.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000246;gene_id=HG03521_ch_G0000087;Parent=HG03521_ch_T0000246;transcript_name=hg002_chrY_paternal_162.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000246:5;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9090994	9096680	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_163;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;gene_id=HG03521_ch_G0000088;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000088;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9090994	9096680	1000	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03521_ch_T0000247;gene_id=HG03521_ch_G0000088;Parent=HG03521_ch_G0000088;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000247;Name=FAM197Y2
HG03521_chrY	CAT	exon	9090994	9091053	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03521_ch_T0000247;gene_id=HG03521_ch_G0000088;Parent=HG03521_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000247:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9091054	9094602	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03521_ch_T0000247;gene_id=HG03521_ch_G0000088;Parent=HG03521_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000247:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9094603	9094761	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03521_ch_T0000247;gene_id=HG03521_ch_G0000088;Parent=HG03521_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000247:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9094762	9096257	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03521_ch_T0000247;gene_id=HG03521_ch_G0000088;Parent=HG03521_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000247:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9096258	9096403	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03521_ch_T0000247;gene_id=HG03521_ch_G0000088;Parent=HG03521_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000247:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9096404	9096489	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03521_ch_T0000247;gene_id=HG03521_ch_G0000088;Parent=HG03521_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000247:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9096490	9096680	.	-	.	source_transcript=hg002_chrY_paternal_163.1;source_transcript_name=hg002_chrY_paternal_163.1;source_gene=hg002_chrY_paternal_163;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_163;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_163.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_163.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_163.1,hg002_chrY_paternal_163.1;transcript_id=HG03521_ch_T0000247;gene_id=HG03521_ch_G0000088;Parent=HG03521_ch_T0000247;transcript_name=hg002_chrY_paternal_163.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000247:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9099204	9102000	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_170;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;gene_id=HG03521_ch_G0000089;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000089;Name=TSPY10
HG03521_chrY	CAT	transcript	9099204	9102000	100	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_G0000089;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG03521_ch_T0000248;Name=TSPY10
HG03521_chrY	CAT	exon	9099204	9099735	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9099250	9099735	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9099250	9099252	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000248;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9099736	9100342	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000248:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100343	9100420	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9100343	9100420	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100421	9100548	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000248:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100549	9100660	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9100549	9100660	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100661	9100761	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000248:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100762	9100907	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9100762	9100907	.	+	2	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100908	9101013	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000248:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9101014	9101095	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9101014	9101095	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9101096	9101789	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000248:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9101790	9102000	.	+	.	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000248:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9101790	9101812	.	+	2	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000248:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9101810	9101812	.	+	0	source_transcript=hg002_chrY_paternal_170.1;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.1,hg002_chrY_paternal_168.1;transcript_id=HG03521_ch_T0000248;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000248;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000248;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9099204	9102000	100	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_G0000089;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG03521_ch_T0000249;Name=TSPY10
HG03521_chrY	CAT	exon	9099204	9099735	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9099250	9099735	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9099250	9099252	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000249;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9099736	9100342	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000249:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100343	9100420	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9100343	9100420	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100421	9100548	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000249:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100549	9100660	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9100549	9100660	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100661	9100761	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000249:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100762	9100907	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9100762	9100907	.	+	2	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100908	9101002	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000249:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9101003	9101095	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9101003	9101065	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9101063	9101065	.	+	0	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000249;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9101096	9101789	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000249:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9101790	9102000	.	+	.	source_transcript=hg002_chrY_paternal_170.2;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.2,hg002_chrY_paternal_168.2;transcript_id=HG03521_ch_T0000249;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000249;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000249:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9099204	9102000	100	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_G0000089;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=HG03521_ch_T0000250;Name=TSPY10
HG03521_chrY	CAT	exon	9099204	9099735	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9099250	9099735	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9099250	9099252	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000250;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9099736	9100342	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000250:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100343	9100420	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9100343	9100420	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100421	9100548	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000250:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100549	9100660	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9100549	9100660	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100661	9100768	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000250:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100769	9100907	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9100769	9100907	.	+	2	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100908	9101013	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000250:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9101014	9101095	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9101014	9101065	.	+	1	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9101063	9101065	.	+	0	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000250;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9101096	9101789	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000250:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9101790	9102000	.	+	.	source_transcript=hg002_chrY_paternal_170.3;source_transcript_name=hg002_chrY_paternal_170.4;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_170.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.3,hg002_chrY_paternal_168.3;transcript_id=HG03521_ch_T0000250;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000250;transcript_name=hg002_chrY_paternal_170.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000250:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9099204	9102000	1000	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_G0000089;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=HG03521_ch_T0000251;Name=TSPY10
HG03521_chrY	CAT	exon	9099204	9099735	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000251:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9099736	9100342	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000251:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100343	9100420	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000251:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100421	9100548	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000251:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100549	9100660	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000251:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100661	9100768	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000251:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9100769	9100907	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000251:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9100908	9101002	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000251:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9101003	9101095	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000251:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9101096	9101789	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000251:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9101790	9102000	.	+	.	source_transcript=hg002_chrY_paternal_170.4;source_transcript_name=hg002_chrY_paternal_170.1;source_gene=hg002_chrY_paternal_170;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_170;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_170.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_170.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_164.4,hg002_chrY_paternal_168.4;transcript_id=HG03521_ch_T0000251;gene_id=HG03521_ch_G0000089;Parent=HG03521_ch_T0000251;transcript_name=hg002_chrY_paternal_170.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000251:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9111265	9116874	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_177;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;gene_id=HG03521_ch_G0000090;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03521_ch_G0000090;Name=FAM197Y3
HG03521_chrY	CAT	transcript	9111265	9116874	1000	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000252;gene_id=HG03521_ch_G0000090;Parent=HG03521_ch_G0000090;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000252;Name=FAM197Y3
HG03521_chrY	CAT	exon	9111265	9111324	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000252;gene_id=HG03521_ch_G0000090;Parent=HG03521_ch_T0000252;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000252:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9111325	9114875	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000252;gene_id=HG03521_ch_G0000090;Parent=HG03521_ch_T0000252;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000252:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9114876	9115034	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000252;gene_id=HG03521_ch_G0000090;Parent=HG03521_ch_T0000252;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000252:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9115035	9116540	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000252;gene_id=HG03521_ch_G0000090;Parent=HG03521_ch_T0000252;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000252:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9116541	9116686	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000252;gene_id=HG03521_ch_G0000090;Parent=HG03521_ch_T0000252;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000252:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9116687	9116772	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000252;gene_id=HG03521_ch_G0000090;Parent=HG03521_ch_T0000252;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000252:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9116773	9116874	.	-	.	source_transcript=hg002_chrY_paternal_177.1;source_transcript_name=hg002_chrY_paternal_177.1;source_gene=hg002_chrY_paternal_177;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_177;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_177.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_177.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_167.1,hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000252;gene_id=HG03521_ch_G0000090;Parent=HG03521_ch_T0000252;transcript_name=hg002_chrY_paternal_177.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000252:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9119487	9122283	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_178;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;gene_id=HG03521_ch_G0000091;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000091;Name=TSPY10
HG03521_chrY	CAT	transcript	9119487	9122283	100	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_G0000091;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG03521_ch_T0000253;Name=TSPY10
HG03521_chrY	CAT	exon	9119487	9120018	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9119533	9120018	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9119533	9119535	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000253;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120019	9120625	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000253:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9120626	9120703	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9120626	9120703	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120704	9120831	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000253:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9120832	9120943	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9120832	9120943	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120944	9121044	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000253:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9121045	9121190	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9121045	9121190	.	+	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9121191	9121296	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000253:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9121297	9121378	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9121297	9121378	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9121379	9122072	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000253:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9122073	9122283	.	+	.	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000253:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9122073	9122095	.	+	2	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000253:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9122093	9122095	.	+	0	source_transcript=hg002_chrY_paternal_178.1;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.1,hg002_chrY_paternal_178.1;transcript_id=HG03521_ch_T0000253;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000253;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000253;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9119487	9122283	100	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_G0000091;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG03521_ch_T0000254;Name=TSPY10
HG03521_chrY	CAT	exon	9119487	9120018	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9119533	9120018	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9119533	9119535	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000254;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120019	9120625	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000254:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9120626	9120703	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9120626	9120703	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120704	9120831	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000254:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9120832	9120943	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9120832	9120943	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120944	9121044	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000254:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9121045	9121190	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9121045	9121190	.	+	2	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9121191	9121285	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000254:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9121286	9121378	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9121286	9121348	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9121346	9121348	.	+	0	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000254;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9121379	9122072	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000254:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9122073	9122283	.	+	.	source_transcript=hg002_chrY_paternal_178.2;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.2,hg002_chrY_paternal_178.2;transcript_id=HG03521_ch_T0000254;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000254;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000254:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9119487	9122283	100	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_G0000091;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=HG03521_ch_T0000255;Name=TSPY10
HG03521_chrY	CAT	exon	9119487	9120018	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9119533	9120018	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9119533	9119535	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000255;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120019	9120625	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000255:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9120626	9120703	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9120626	9120703	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120704	9120831	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000255:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9120832	9120943	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9120832	9120943	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120944	9121051	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000255:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9121052	9121190	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9121052	9121190	.	+	2	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9121191	9121296	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000255:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9121297	9121378	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9121297	9121348	.	+	1	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9121346	9121348	.	+	0	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000255;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9121379	9122072	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000255:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9122073	9122283	.	+	.	source_transcript=hg002_chrY_paternal_178.3;source_transcript_name=hg002_chrY_paternal_178.4;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_178.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.3,hg002_chrY_paternal_178.3;transcript_id=HG03521_ch_T0000255;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000255;transcript_name=hg002_chrY_paternal_178.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000255:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9119487	9122283	1000	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_G0000091;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=HG03521_ch_T0000256;Name=TSPY10
HG03521_chrY	CAT	exon	9119487	9120018	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120019	9120625	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000256:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9120626	9120703	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120704	9120831	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000256:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9120832	9120943	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9120944	9121051	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000256:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9121052	9121190	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9121191	9121285	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000256:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9121286	9121378	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9121379	9122072	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000256:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9122073	9122283	.	+	.	source_transcript=hg002_chrY_paternal_178.4;source_transcript_name=hg002_chrY_paternal_178.1;source_gene=hg002_chrY_paternal_178;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_178;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_178.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_178.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_168.4,hg002_chrY_paternal_178.4;transcript_id=HG03521_ch_T0000256;gene_id=HG03521_ch_G0000091;Parent=HG03521_ch_T0000256;transcript_name=hg002_chrY_paternal_178.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000256:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9131555	9137157	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_189;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;gene_id=HG03521_ch_G0000092;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03521_ch_G0000092;Name=FAM197Y3
HG03521_chrY	CAT	transcript	9131555	9137157	1000	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03521_ch_T0000257;gene_id=HG03521_ch_G0000092;Parent=HG03521_ch_G0000092;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000257;Name=FAM197Y3
HG03521_chrY	CAT	exon	9131555	9131614	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03521_ch_T0000257;gene_id=HG03521_ch_G0000092;Parent=HG03521_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000257:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9131615	9135162	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03521_ch_T0000257;gene_id=HG03521_ch_G0000092;Parent=HG03521_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000257:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9135163	9135321	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03521_ch_T0000257;gene_id=HG03521_ch_G0000092;Parent=HG03521_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000257:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9135322	9136823	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03521_ch_T0000257;gene_id=HG03521_ch_G0000092;Parent=HG03521_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000257:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9136824	9136969	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03521_ch_T0000257;gene_id=HG03521_ch_G0000092;Parent=HG03521_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000257:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9136970	9137055	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03521_ch_T0000257;gene_id=HG03521_ch_G0000092;Parent=HG03521_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000257:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9137056	9137157	.	-	.	source_transcript=hg002_chrY_paternal_189.1;source_transcript_name=hg002_chrY_paternal_189.1;source_gene=hg002_chrY_paternal_189;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_189;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_189.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_189.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_169.1,hg002_chrY_paternal_179.1;transcript_id=HG03521_ch_T0000257;gene_id=HG03521_ch_G0000092;Parent=HG03521_ch_T0000257;transcript_name=hg002_chrY_paternal_189.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000257:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9139766	9142562	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_192;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;gene_id=HG03521_ch_G0000093;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000093;Name=TSPY10
HG03521_chrY	CAT	transcript	9139766	9142562	100	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_G0000093;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG03521_ch_T0000258;Name=TSPY10
HG03521_chrY	CAT	exon	9139766	9140297	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9139812	9140297	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9139812	9139814	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9140298	9140904	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000258:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9140905	9140982	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9140905	9140982	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9140983	9141110	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000258:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141111	9141222	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9141111	9141222	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141223	9141323	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000258:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141324	9141469	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9141324	9141469	.	+	2	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141470	9141575	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000258:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141576	9141657	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9141576	9141657	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141658	9142351	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000258:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9142352	9142562	.	+	.	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000258:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9142352	9142374	.	+	2	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000258:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9142372	9142374	.	+	0	source_transcript=hg002_chrY_paternal_192.1;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.1,hg002_chrY_paternal_180.1;transcript_id=HG03521_ch_T0000258;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000258;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000258;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9139766	9142562	100	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_G0000093;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG03521_ch_T0000259;Name=TSPY10
HG03521_chrY	CAT	exon	9139766	9140297	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9139812	9140297	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9139812	9139814	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9140298	9140904	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000259:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9140905	9140982	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9140905	9140982	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9140983	9141110	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000259:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141111	9141222	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9141111	9141222	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141223	9141323	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000259:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141324	9141469	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9141324	9141469	.	+	2	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141470	9141564	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000259:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141565	9141657	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9141565	9141627	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9141625	9141627	.	+	0	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000259;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141658	9142351	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000259:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9142352	9142562	.	+	.	source_transcript=hg002_chrY_paternal_192.2;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.2,hg002_chrY_paternal_180.2;transcript_id=HG03521_ch_T0000259;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000259;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000259:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9139766	9142562	100	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_G0000093;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=HG03521_ch_T0000260;Name=TSPY10
HG03521_chrY	CAT	exon	9139766	9140297	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9139812	9140297	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9139812	9139814	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9140298	9140904	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000260:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9140905	9140982	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9140905	9140982	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9140983	9141110	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000260:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141111	9141222	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9141111	9141222	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141223	9141330	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000260:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141331	9141469	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9141331	9141469	.	+	2	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141470	9141575	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000260:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141576	9141657	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9141576	9141627	.	+	1	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9141625	9141627	.	+	0	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000260;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141658	9142351	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000260:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9142352	9142562	.	+	.	source_transcript=hg002_chrY_paternal_192.3;source_transcript_name=hg002_chrY_paternal_192.4;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_192.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.3,hg002_chrY_paternal_180.3;transcript_id=HG03521_ch_T0000260;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000260;transcript_name=hg002_chrY_paternal_192.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000260:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9139766	9142562	1000	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_G0000093;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=HG03521_ch_T0000261;Name=TSPY10
HG03521_chrY	CAT	exon	9139766	9140297	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9140298	9140904	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000261:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9140905	9140982	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9140983	9141110	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000261:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141111	9141222	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141223	9141330	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000261:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141331	9141469	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141470	9141564	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000261:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9141565	9141657	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9141658	9142351	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000261:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9142352	9142562	.	+	.	source_transcript=hg002_chrY_paternal_192.4;source_transcript_name=hg002_chrY_paternal_192.1;source_gene=hg002_chrY_paternal_192;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_192;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_192.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_192.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_170.4,hg002_chrY_paternal_180.4;transcript_id=HG03521_ch_T0000261;gene_id=HG03521_ch_G0000093;Parent=HG03521_ch_T0000261;transcript_name=hg002_chrY_paternal_192.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000261:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9151824	9157504	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_181;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;gene_id=HG03521_ch_G0000094;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000094;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9151824	9157504	1000	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000262;gene_id=HG03521_ch_G0000094;Parent=HG03521_ch_G0000094;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000262;Name=FAM197Y2
HG03521_chrY	CAT	exon	9151824	9151883	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000262;gene_id=HG03521_ch_G0000094;Parent=HG03521_ch_T0000262;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000262:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9151884	9155432	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000262;gene_id=HG03521_ch_G0000094;Parent=HG03521_ch_T0000262;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000262:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9155433	9155591	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000262;gene_id=HG03521_ch_G0000094;Parent=HG03521_ch_T0000262;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000262:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9155592	9157081	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000262;gene_id=HG03521_ch_G0000094;Parent=HG03521_ch_T0000262;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000262:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9157082	9157227	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000262;gene_id=HG03521_ch_G0000094;Parent=HG03521_ch_T0000262;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000262:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9157228	9157313	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000262;gene_id=HG03521_ch_G0000094;Parent=HG03521_ch_T0000262;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000262:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9157314	9157504	.	-	.	source_transcript=hg002_chrY_paternal_181.1;source_transcript_name=hg002_chrY_paternal_181.1;source_gene=hg002_chrY_paternal_181;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_181;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_181.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_181.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_171.1,hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000262;gene_id=HG03521_ch_G0000094;Parent=HG03521_ch_T0000262;transcript_name=hg002_chrY_paternal_181.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000262:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9160028	9162824	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_182;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;gene_id=HG03521_ch_G0000095;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000095;Name=TSPY10
HG03521_chrY	CAT	transcript	9160028	9162824	100	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_G0000095;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG03521_ch_T0000263;Name=TSPY10
HG03521_chrY	CAT	exon	9160028	9160559	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9160074	9160559	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9160074	9160076	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9160560	9161166	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000263:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161167	9161244	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161167	9161244	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161245	9161372	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000263:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161373	9161484	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161373	9161484	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161485	9161585	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000263:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161586	9161731	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161586	9161731	.	+	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161732	9161837	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000263:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161838	9161919	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161838	9161919	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161920	9162613	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000263:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9162614	9162824	.	+	.	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000263:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9162614	9162636	.	+	2	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000263:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9162634	9162636	.	+	0	source_transcript=hg002_chrY_paternal_182.1;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.1,hg002_chrY_paternal_182.1;transcript_id=HG03521_ch_T0000263;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000263;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000263;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9160028	9162824	100	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_G0000095;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG03521_ch_T0000264;Name=TSPY10
HG03521_chrY	CAT	exon	9160028	9160559	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9160074	9160559	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9160074	9160076	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9160560	9161166	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000264:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161167	9161244	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161167	9161244	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161245	9161372	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000264:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161373	9161484	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161373	9161484	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161485	9161585	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000264:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161586	9161731	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161586	9161731	.	+	2	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161732	9161826	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000264:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161827	9161919	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161827	9161889	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9161887	9161889	.	+	0	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000264;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161920	9162613	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000264:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9162614	9162824	.	+	.	source_transcript=hg002_chrY_paternal_182.2;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.2,hg002_chrY_paternal_182.2;transcript_id=HG03521_ch_T0000264;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000264;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000264:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9160028	9162824	100	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_G0000095;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=HG03521_ch_T0000265;Name=TSPY10
HG03521_chrY	CAT	exon	9160028	9160559	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9160074	9160559	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9160074	9160076	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9160560	9161166	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000265:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161167	9161244	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161167	9161244	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161245	9161372	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000265:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161373	9161484	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161373	9161484	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161485	9161592	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000265:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161593	9161731	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161593	9161731	.	+	2	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161732	9161837	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000265:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161838	9161919	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9161838	9161889	.	+	1	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9161887	9161889	.	+	0	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000265;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161920	9162613	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000265:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9162614	9162824	.	+	.	source_transcript=hg002_chrY_paternal_182.3;source_transcript_name=hg002_chrY_paternal_182.4;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_182.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.3,hg002_chrY_paternal_182.3;transcript_id=HG03521_ch_T0000265;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000265;transcript_name=hg002_chrY_paternal_182.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000265:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9160028	9162824	1000	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_G0000095;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=HG03521_ch_T0000266;Name=TSPY10
HG03521_chrY	CAT	exon	9160028	9160559	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9160560	9161166	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000266:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161167	9161244	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161245	9161372	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000266:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161373	9161484	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161485	9161592	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000266:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161593	9161731	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161732	9161826	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000266:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9161827	9161919	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9161920	9162613	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000266:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9162614	9162824	.	+	.	source_transcript=hg002_chrY_paternal_182.4;source_transcript_name=hg002_chrY_paternal_182.1;source_gene=hg002_chrY_paternal_182;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_182;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_182.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_182.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_172.4,hg002_chrY_paternal_182.4;transcript_id=HG03521_ch_T0000266;gene_id=HG03521_ch_G0000095;Parent=HG03521_ch_T0000266;transcript_name=hg002_chrY_paternal_182.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000266:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9172099	9177781	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_193;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;gene_id=HG03521_ch_G0000096;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000096;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9172099	9177781	1000	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000267;gene_id=HG03521_ch_G0000096;Parent=HG03521_ch_G0000096;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000267;Name=FAM197Y2
HG03521_chrY	CAT	exon	9172099	9172158	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000267;gene_id=HG03521_ch_G0000096;Parent=HG03521_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000267:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9172159	9175707	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000267;gene_id=HG03521_ch_G0000096;Parent=HG03521_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000267:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9175708	9175866	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000267;gene_id=HG03521_ch_G0000096;Parent=HG03521_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000267:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9175867	9177358	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000267;gene_id=HG03521_ch_G0000096;Parent=HG03521_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000267:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9177359	9177504	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000267;gene_id=HG03521_ch_G0000096;Parent=HG03521_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000267:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9177505	9177590	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000267;gene_id=HG03521_ch_G0000096;Parent=HG03521_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000267:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9177591	9177781	.	-	.	source_transcript=hg002_chrY_paternal_193.1;source_transcript_name=hg002_chrY_paternal_193.1;source_gene=hg002_chrY_paternal_193;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_193;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_193.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_193.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_173.1,hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000267;gene_id=HG03521_ch_G0000096;Parent=HG03521_ch_T0000267;transcript_name=hg002_chrY_paternal_193.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000267:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9180305	9183119	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_194;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;gene_id=HG03521_ch_G0000097;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG03521_ch_G0000097;Name=TSPY4
HG03521_chrY	CAT	transcript	9180305	9183119	100	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_G0000097;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG03521_ch_T0000268;Name=TSPY4
HG03521_chrY	CAT	exon	9180305	9180854	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000268:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9180351	9180854	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000268:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9180351	9180353	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000268;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9180855	9181461	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000268:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181462	9181539	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000268:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9181462	9181539	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000268:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9181540	9181667	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000268:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181668	9181779	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000268:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9181668	9181779	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000268:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9181780	9181880	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000268:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181881	9182026	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000268:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9181881	9182026	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000268:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9182027	9182132	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000268:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9182133	9182214	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000268:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9182133	9182214	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000268:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9182215	9182908	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000268:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9182909	9183119	.	+	.	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000268:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9182909	9182931	.	+	2	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000268:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9182929	9182931	.	+	0	source_transcript=hg002_chrY_paternal_194.1;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.1,hg002_chrY_paternal_184.1;transcript_id=HG03521_ch_T0000268;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000268;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000268;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9180305	9183119	100	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_G0000097;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG03521_ch_T0000269;Name=TSPY4
HG03521_chrY	CAT	exon	9180305	9180854	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9180351	9180854	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9180351	9180353	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000269;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9180855	9181461	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000269:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181462	9181539	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9181462	9181539	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9181540	9181667	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000269:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181668	9181779	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9181668	9181779	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9181780	9181880	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000269:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181881	9182026	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9181881	9182026	.	+	2	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9182027	9182121	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000269:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9182122	9182214	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9182122	9182184	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9182182	9182184	.	+	0	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000269;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9182215	9182908	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000269:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9182909	9183119	.	+	.	source_transcript=hg002_chrY_paternal_194.2;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.2,hg002_chrY_paternal_184.2;transcript_id=HG03521_ch_T0000269;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000269;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000269:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9180305	9183119	100	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_G0000097;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=HG03521_ch_T0000270;Name=TSPY4
HG03521_chrY	CAT	exon	9180305	9180854	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000270:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9180351	9180854	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000270:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9180351	9180353	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000270;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9180855	9181461	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000270:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181462	9181539	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000270:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9181462	9181539	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000270:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9181540	9181667	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000270:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181668	9181779	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000270:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9181668	9181779	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000270:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9181780	9181887	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000270:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181888	9182026	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000270:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9181888	9182026	.	+	2	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000270:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9182027	9182132	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000270:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9182133	9182214	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000270:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9182133	9182184	.	+	1	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000270:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9182182	9182184	.	+	0	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000270;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9182215	9182908	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000270:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9182909	9183119	.	+	.	source_transcript=hg002_chrY_paternal_194.3;source_transcript_name=hg002_chrY_paternal_194.4;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_194.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.3,hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000270;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000270;transcript_name=hg002_chrY_paternal_194.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000270:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9180305	9183119	1000	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_G0000097;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=HG03521_ch_T0000271;Name=TSPY4
HG03521_chrY	CAT	exon	9180305	9180854	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000271:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9180855	9181461	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000271:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181462	9181539	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000271:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9181540	9181667	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000271:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181668	9181779	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000271:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9181780	9181887	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000271:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9181888	9182026	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000271:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9182027	9182121	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000271:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9182122	9182214	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000271:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9182215	9182908	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000271:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9182909	9183119	.	+	.	source_transcript=hg002_chrY_paternal_194.4;source_transcript_name=hg002_chrY_paternal_194.1;source_gene=hg002_chrY_paternal_194;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_194;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_194.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_194.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_174.4,hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000271;gene_id=HG03521_ch_G0000097;Parent=HG03521_ch_T0000271;transcript_name=hg002_chrY_paternal_194.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000271:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9192391	9198079	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_207;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_193.1;gene_id=HG03521_ch_G0000098;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000098;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9192391	9198079	1000	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_193.1;transcript_id=HG03521_ch_T0000272;gene_id=HG03521_ch_G0000098;Parent=HG03521_ch_G0000098;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000272;Name=FAM197Y2
HG03521_chrY	CAT	exon	9192391	9192450	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_193.1;transcript_id=HG03521_ch_T0000272;gene_id=HG03521_ch_G0000098;Parent=HG03521_ch_T0000272;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000272:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9192451	9195999	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_193.1;transcript_id=HG03521_ch_T0000272;gene_id=HG03521_ch_G0000098;Parent=HG03521_ch_T0000272;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000272:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9196000	9196158	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_193.1;transcript_id=HG03521_ch_T0000272;gene_id=HG03521_ch_G0000098;Parent=HG03521_ch_T0000272;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000272:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9196159	9197656	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_193.1;transcript_id=HG03521_ch_T0000272;gene_id=HG03521_ch_G0000098;Parent=HG03521_ch_T0000272;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000272:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9197657	9197802	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_193.1;transcript_id=HG03521_ch_T0000272;gene_id=HG03521_ch_G0000098;Parent=HG03521_ch_T0000272;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000272:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9197803	9197888	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_193.1;transcript_id=HG03521_ch_T0000272;gene_id=HG03521_ch_G0000098;Parent=HG03521_ch_T0000272;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000272:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9197889	9198079	.	-	.	source_transcript=hg002_chrY_paternal_207.1;source_transcript_name=hg002_chrY_paternal_207.1;source_gene=hg002_chrY_paternal_207;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_207;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_207.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_207.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_175.1,hg002_chrY_paternal_193.1;transcript_id=HG03521_ch_T0000272;gene_id=HG03521_ch_G0000098;Parent=HG03521_ch_T0000272;transcript_name=hg002_chrY_paternal_207.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000272:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9200605	9203419	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_176;alternative_source_transcripts=hg002_chrY_paternal_194.4;gene_id=HG03521_ch_G0000099;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=augTM,transMap;ID=HG03521_ch_G0000099;Name=TSPY3
HG03521_chrY	CAT	transcript	9200605	9203419	1000	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_G0000099;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=HG03521_ch_T0000273;Name=TSPY3
HG03521_chrY	CAT	exon	9200605	9201154	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000273:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9201155	9201761	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000273:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9201762	9201839	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000273:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9201840	9201967	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000273:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9201968	9202079	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000273:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9202080	9202187	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000273:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9202188	9202326	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000273:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9202327	9202421	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000273:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9202422	9202514	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000273:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9202515	9203208	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000273:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9203209	9203419	.	+	.	source_transcript=hg002_chrY_paternal_176.4;source_transcript_name=hg002_chrY_paternal_176.4;source_gene=hg002_chrY_paternal_176;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_176;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_176.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_176.4;transcript_score=299.828;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_194.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000273;gene_id=HG03521_ch_G0000099;Parent=HG03521_ch_T0000273;transcript_name=hg002_chrY_paternal_176.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000273:5;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9212684	9218292	.	-	.	source_gene_common_name=FAM197Y7;source_gene=hg002_chrY_paternal_203;alternative_source_transcripts=hg002_chrY_paternal_177.1;gene_id=HG03521_ch_G0000100;gene_biotype=lncRNA;gene_name=FAM197Y7;gene_sources=liftoff;ID=HG03521_ch_G0000100;Name=FAM197Y7
HG03521_chrY	CAT	transcript	9212684	9218292	1000	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000274;gene_id=HG03521_ch_G0000100;Parent=HG03521_ch_G0000100;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=HG03521_ch_T0000274;Name=FAM197Y7
HG03521_chrY	CAT	exon	9212684	9212743	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000274;gene_id=HG03521_ch_G0000100;Parent=HG03521_ch_T0000274;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03521_ch_T0000274:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9212744	9216297	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000274;gene_id=HG03521_ch_G0000100;Parent=HG03521_ch_T0000274;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG03521_ch_T0000274:0;Name=FAM197Y7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9216298	9216456	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000274;gene_id=HG03521_ch_G0000100;Parent=HG03521_ch_T0000274;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03521_ch_T0000274:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9216457	9217958	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000274;gene_id=HG03521_ch_G0000100;Parent=HG03521_ch_T0000274;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG03521_ch_T0000274:1;Name=FAM197Y7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9217959	9218104	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000274;gene_id=HG03521_ch_G0000100;Parent=HG03521_ch_T0000274;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03521_ch_T0000274:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9218105	9218190	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000274;gene_id=HG03521_ch_G0000100;Parent=HG03521_ch_T0000274;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=intron:HG03521_ch_T0000274:2;Name=FAM197Y7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9218191	9218292	.	-	.	source_transcript=hg002_chrY_paternal_203.1;source_transcript_name=hg002_chrY_paternal_203.1;source_gene=hg002_chrY_paternal_203;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_203;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_203.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_203.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y7;alternative_source_transcripts=hg002_chrY_paternal_177.1;transcript_id=HG03521_ch_T0000274;gene_id=HG03521_ch_G0000100;Parent=HG03521_ch_T0000274;transcript_name=hg002_chrY_paternal_203.1;gene_name=FAM197Y7;ID=exon:HG03521_ch_T0000274:3;Name=FAM197Y7;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9220905	9223701	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;gene_id=HG03521_ch_G0000101;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03521_ch_G0000101;Name=TSPY1
HG03521_chrY	CAT	transcript	9220905	9223701	100	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_G0000101;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03521_ch_T0000275;Name=TSPY1
HG03521_chrY	CAT	exon	9220905	9221436	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000275:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9220951	9221436	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000275:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9220951	9220953	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000275;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9221437	9222043	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000275:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222044	9222121	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000275:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222044	9222121	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000275:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222122	9222249	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000275:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222250	9222361	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000275:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222250	9222361	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000275:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222362	9222462	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000275:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222463	9222608	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000275:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222463	9222608	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000275:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222609	9222714	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000275:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222715	9222796	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000275:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222715	9222796	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000275:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222797	9223490	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000275:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9223491	9223701	.	+	.	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000275:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9223491	9223513	.	+	2	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000275:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9223511	9223513	.	+	0	source_transcript=hg002_chrY_paternal_196.3;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.1,hg002_chrY_paternal_196.3;transcript_id=HG03521_ch_T0000275;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000275;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000275;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9220905	9223701	100	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_G0000101;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03521_ch_T0000276;Name=TSPY1
HG03521_chrY	CAT	exon	9220905	9221436	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000276:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9220951	9221436	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000276:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9220951	9220953	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000276;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9221437	9222043	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000276:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222044	9222121	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000276:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222044	9222121	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000276:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222122	9222249	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000276:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222250	9222361	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000276:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222250	9222361	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000276:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222362	9222462	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000276:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222463	9222608	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000276:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222463	9222608	.	+	2	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000276:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222609	9222703	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000276:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222704	9222796	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000276:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222704	9222766	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000276:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9222764	9222766	.	+	0	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000276;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222797	9223490	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000276:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9223491	9223701	.	+	.	source_transcript=hg002_chrY_paternal_196.1;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.2,hg002_chrY_paternal_196.1;transcript_id=HG03521_ch_T0000276;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000276;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000276:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9220905	9223701	100	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_G0000101;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03521_ch_T0000277;Name=TSPY1
HG03521_chrY	CAT	exon	9220905	9221436	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000277:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9220951	9221436	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000277:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9220951	9220953	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000277;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9221437	9222043	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000277:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222044	9222121	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000277:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222044	9222121	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000277:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222122	9222249	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000277:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222250	9222361	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000277:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222250	9222361	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000277:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222362	9222469	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000277:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222470	9222608	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000277:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222470	9222608	.	+	2	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000277:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222609	9222714	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000277:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222715	9222796	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000277:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222715	9222766	.	+	1	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000277:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9222764	9222766	.	+	0	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000277;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222797	9223490	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000277:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9223491	9223701	.	+	.	source_transcript=hg002_chrY_paternal_196.4;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.3,hg002_chrY_paternal_196.4;transcript_id=HG03521_ch_T0000277;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000277;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000277:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9220905	9223701	100	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_G0000101;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03521_ch_T0000278;Name=TSPY1
HG03521_chrY	CAT	exon	9220905	9221037	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9220951	9221037	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9220951	9220953	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000278;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9221038	9221298	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000278:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9221299	9221436	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9221299	9221436	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9221437	9222043	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000278:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222044	9222121	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222044	9222121	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222122	9222249	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000278:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222250	9222361	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222250	9222361	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222362	9222462	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000278:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222463	9222608	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222463	9222608	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222609	9222714	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000278:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222715	9222796	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9222715	9222796	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222797	9223490	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000278:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9223491	9223701	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000278:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9223491	9223513	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000278:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9223511	9223513	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_196.2;transcript_id=HG03521_ch_T0000278;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000278;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000278;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9220905	9223701	1000	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_G0000101;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=HG03521_ch_T0000279;Name=TSPY1
HG03521_chrY	CAT	exon	9220905	9221436	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9221437	9222043	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000279:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222044	9222121	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222122	9222249	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000279:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222250	9222361	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222362	9222469	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000279:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222470	9222608	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222609	9222703	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000279:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9222704	9222796	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9222797	9223490	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000279:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9223491	9223701	.	+	.	source_transcript=hg002_chrY_paternal_196.5;source_transcript_name=hg002_chrY_paternal_196.1;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_196.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_196.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_178.4,hg002_chrY_paternal_196.5;transcript_id=HG03521_ch_T0000279;gene_id=HG03521_ch_G0000101;Parent=HG03521_ch_T0000279;transcript_name=hg002_chrY_paternal_196.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000279:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9232981	9238586	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_197;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;gene_id=HG03521_ch_G0000102;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03521_ch_G0000102;Name=FAM197Y3
HG03521_chrY	CAT	transcript	9232981	9238586	1000	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000280;gene_id=HG03521_ch_G0000102;Parent=HG03521_ch_G0000102;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000280;Name=FAM197Y3
HG03521_chrY	CAT	exon	9232981	9233040	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000280;gene_id=HG03521_ch_G0000102;Parent=HG03521_ch_T0000280;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000280:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9233041	9236591	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000280;gene_id=HG03521_ch_G0000102;Parent=HG03521_ch_T0000280;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000280:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9236592	9236750	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000280;gene_id=HG03521_ch_G0000102;Parent=HG03521_ch_T0000280;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000280:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9236751	9238252	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000280;gene_id=HG03521_ch_G0000102;Parent=HG03521_ch_T0000280;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000280:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9238253	9238398	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000280;gene_id=HG03521_ch_G0000102;Parent=HG03521_ch_T0000280;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000280:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9238399	9238484	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000280;gene_id=HG03521_ch_G0000102;Parent=HG03521_ch_T0000280;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000280:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9238485	9238586	.	-	.	source_transcript=hg002_chrY_paternal_197.1;source_transcript_name=hg002_chrY_paternal_197.1;source_gene=hg002_chrY_paternal_197;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_197;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_197.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_197.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_179.1,hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000280;gene_id=HG03521_ch_G0000102;Parent=HG03521_ch_T0000280;transcript_name=hg002_chrY_paternal_197.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000280:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9241199	9243995	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;gene_id=HG03521_ch_G0000103;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03521_ch_G0000103;Name=TSPY1
HG03521_chrY	CAT	transcript	9241199	9243995	100	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_G0000103;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03521_ch_T0000281;Name=TSPY1
HG03521_chrY	CAT	exon	9241199	9241730	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9241245	9241730	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9241245	9241247	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000281;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9241731	9242337	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000281:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242338	9242415	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242338	9242415	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242416	9242543	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000281:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242544	9242655	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242544	9242655	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242656	9242756	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000281:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242757	9242902	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242757	9242902	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242903	9243008	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000281:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9243009	9243090	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9243009	9243090	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9243091	9243784	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000281:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9243785	9243995	.	+	.	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000281:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9243785	9243807	.	+	2	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000281:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9243805	9243807	.	+	0	source_transcript=hg002_chrY_paternal_198.3;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.1,hg002_chrY_paternal_198.3;transcript_id=HG03521_ch_T0000281;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000281;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000281;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9241199	9243995	100	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_G0000103;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03521_ch_T0000282;Name=TSPY1
HG03521_chrY	CAT	exon	9241199	9241730	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9241245	9241730	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9241245	9241247	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000282;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9241731	9242337	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000282:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242338	9242415	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242338	9242415	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242416	9242543	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000282:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242544	9242655	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242544	9242655	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242656	9242756	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000282:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242757	9242902	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242757	9242902	.	+	2	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242903	9242997	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000282:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242998	9243090	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242998	9243060	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9243058	9243060	.	+	0	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000282;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9243091	9243784	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000282:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9243785	9243995	.	+	.	source_transcript=hg002_chrY_paternal_198.1;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.2,hg002_chrY_paternal_198.1;transcript_id=HG03521_ch_T0000282;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000282;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000282:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9241199	9243995	100	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_G0000103;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03521_ch_T0000283;Name=TSPY1
HG03521_chrY	CAT	exon	9241199	9241730	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000283:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9241245	9241730	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000283:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9241245	9241247	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000283;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9241731	9242337	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000283:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242338	9242415	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000283:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242338	9242415	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000283:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242416	9242543	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000283:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242544	9242655	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000283:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242544	9242655	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000283:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242656	9242763	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000283:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242764	9242902	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000283:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242764	9242902	.	+	2	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000283:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242903	9243008	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000283:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9243009	9243090	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000283:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9243009	9243060	.	+	1	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000283:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9243058	9243060	.	+	0	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000283;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9243091	9243784	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000283:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9243785	9243995	.	+	.	source_transcript=hg002_chrY_paternal_198.4;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.3,hg002_chrY_paternal_198.4;transcript_id=HG03521_ch_T0000283;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000283;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000283:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9241199	9243995	100	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_G0000103;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03521_ch_T0000284;Name=TSPY1
HG03521_chrY	CAT	exon	9241199	9241331	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000284:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9241245	9241331	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000284:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9241245	9241247	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000284;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9241332	9241592	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000284:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9241593	9241730	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000284:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9241593	9241730	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000284:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9241731	9242337	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000284:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242338	9242415	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000284:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242338	9242415	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000284:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242416	9242543	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000284:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242544	9242655	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000284:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242544	9242655	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000284:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242656	9242756	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000284:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242757	9242902	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000284:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9242757	9242902	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000284:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242903	9243008	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000284:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9243009	9243090	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000284:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9243009	9243090	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000284:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9243091	9243784	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000284:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9243785	9243995	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000284:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9243785	9243807	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000284:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9243805	9243807	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_198.2;transcript_id=HG03521_ch_T0000284;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000284;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000284;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9241199	9243995	1000	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_G0000103;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=HG03521_ch_T0000285;Name=TSPY1
HG03521_chrY	CAT	exon	9241199	9241730	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000285:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9241731	9242337	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000285:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242338	9242415	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000285:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242416	9242543	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000285:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242544	9242655	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000285:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242656	9242763	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000285:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242764	9242902	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000285:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9242903	9242997	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000285:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9242998	9243090	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000285:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9243091	9243784	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000285:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9243785	9243995	.	+	.	source_transcript=hg002_chrY_paternal_198.5;source_transcript_name=hg002_chrY_paternal_198.1;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_198.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_198.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_180.4,hg002_chrY_paternal_198.5;transcript_id=HG03521_ch_T0000285;gene_id=HG03521_ch_G0000103;Parent=HG03521_ch_T0000285;transcript_name=hg002_chrY_paternal_198.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000285:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9253265	9258965	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_183;alternative_source_transcripts=hg002_chrY_paternal_181.1;gene_id=HG03521_ch_G0000104;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000104;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9253265	9258965	1000	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000286;gene_id=HG03521_ch_G0000104;Parent=HG03521_ch_G0000104;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000286;Name=FAM197Y2
HG03521_chrY	CAT	exon	9253265	9253324	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000286;gene_id=HG03521_ch_G0000104;Parent=HG03521_ch_T0000286;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000286:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9253325	9256879	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000286;gene_id=HG03521_ch_G0000104;Parent=HG03521_ch_T0000286;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000286:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9256880	9257038	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000286;gene_id=HG03521_ch_G0000104;Parent=HG03521_ch_T0000286;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000286:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9257039	9258542	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000286;gene_id=HG03521_ch_G0000104;Parent=HG03521_ch_T0000286;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000286:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9258543	9258688	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000286;gene_id=HG03521_ch_G0000104;Parent=HG03521_ch_T0000286;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000286:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9258689	9258774	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000286;gene_id=HG03521_ch_G0000104;Parent=HG03521_ch_T0000286;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000286:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9258775	9258965	.	-	.	source_transcript=hg002_chrY_paternal_183.1;source_transcript_name=hg002_chrY_paternal_183.1;source_gene=hg002_chrY_paternal_183;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_183;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_183.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_183.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_181.1;transcript_id=HG03521_ch_T0000286;gene_id=HG03521_ch_G0000104;Parent=HG03521_ch_T0000286;transcript_name=hg002_chrY_paternal_183.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000286:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9261489	9264286	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_190;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;gene_id=HG03521_ch_G0000105;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000105;Name=TSPY10
HG03521_chrY	CAT	transcript	9261489	9264286	100	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_G0000105;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG03521_ch_T0000287;Name=TSPY10
HG03521_chrY	CAT	exon	9261489	9262020	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000287:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9261535	9262020	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000287:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9261535	9261537	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000287;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262021	9262627	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000287:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9262628	9262705	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000287:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9262628	9262705	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000287:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262706	9262833	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000287:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9262834	9262945	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000287:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9262834	9262945	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000287:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262946	9263046	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000287:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9263047	9263192	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000287:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9263047	9263192	.	+	2	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000287:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9263193	9263298	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000287:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9263299	9263380	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000287:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9263299	9263380	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000287:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9263381	9264074	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000287:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9264075	9264286	.	+	.	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000287:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9264075	9264097	.	+	2	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000287:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9264095	9264097	.	+	0	source_transcript=hg002_chrY_paternal_190.1;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.1,hg002_chrY_paternal_200.1;transcript_id=HG03521_ch_T0000287;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000287;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000287;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9261489	9264286	100	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_G0000105;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG03521_ch_T0000288;Name=TSPY10
HG03521_chrY	CAT	exon	9261489	9262020	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000288:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9261535	9262020	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000288:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9261535	9261537	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000288;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262021	9262627	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000288:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9262628	9262705	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000288:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9262628	9262705	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000288:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262706	9262833	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000288:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9262834	9262945	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000288:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9262834	9262945	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000288:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262946	9263046	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000288:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9263047	9263192	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000288:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9263047	9263192	.	+	2	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000288:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9263193	9263287	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000288:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9263288	9263380	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000288:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9263288	9263350	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000288:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9263348	9263350	.	+	0	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000288;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9263381	9264074	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000288:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9264075	9264286	.	+	.	source_transcript=hg002_chrY_paternal_190.2;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.2,hg002_chrY_paternal_200.2;transcript_id=HG03521_ch_T0000288;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000288;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000288:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9261489	9264286	100	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_G0000105;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=HG03521_ch_T0000289;Name=TSPY10
HG03521_chrY	CAT	exon	9261489	9262020	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000289:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9261535	9262020	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000289:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9261535	9261537	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000289;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262021	9262627	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000289:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9262628	9262705	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000289:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9262628	9262705	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000289:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262706	9262833	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000289:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9262834	9262945	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000289:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9262834	9262945	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000289:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262946	9263053	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000289:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9263054	9263192	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000289:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9263054	9263192	.	+	2	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000289:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9263193	9263298	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000289:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9263299	9263380	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000289:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9263299	9263350	.	+	1	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000289:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9263348	9263350	.	+	0	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000289;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9263381	9264074	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000289:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9264075	9264286	.	+	.	source_transcript=hg002_chrY_paternal_190.3;source_transcript_name=hg002_chrY_paternal_190.4;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_190.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.3,hg002_chrY_paternal_200.3;transcript_id=HG03521_ch_T0000289;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000289;transcript_name=hg002_chrY_paternal_190.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000289:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9261489	9264286	1000	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_G0000105;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=HG03521_ch_T0000290;Name=TSPY10
HG03521_chrY	CAT	exon	9261489	9262020	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000290:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262021	9262627	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000290:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9262628	9262705	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000290:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262706	9262833	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000290:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9262834	9262945	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000290:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9262946	9263053	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000290:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9263054	9263192	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000290:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9263193	9263287	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000290:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9263288	9263380	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000290:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9263381	9264074	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000290:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9264075	9264286	.	+	.	source_transcript=hg002_chrY_paternal_190.4;source_transcript_name=hg002_chrY_paternal_190.1;source_gene=hg002_chrY_paternal_190;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_190;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_190.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_190.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_182.4,hg002_chrY_paternal_200.4;transcript_id=HG03521_ch_T0000290;gene_id=HG03521_ch_G0000105;Parent=HG03521_ch_T0000290;transcript_name=hg002_chrY_paternal_190.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000290:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9273576	9279264	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_195;alternative_source_transcripts=hg002_chrY_paternal_183.1;gene_id=HG03521_ch_G0000106;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000106;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9273576	9279264	1000	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000291;gene_id=HG03521_ch_G0000106;Parent=HG03521_ch_G0000106;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000291;Name=FAM197Y2
HG03521_chrY	CAT	exon	9273576	9273635	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000291;gene_id=HG03521_ch_G0000106;Parent=HG03521_ch_T0000291;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000291:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9273636	9277186	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000291;gene_id=HG03521_ch_G0000106;Parent=HG03521_ch_T0000291;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000291:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9277187	9277345	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000291;gene_id=HG03521_ch_G0000106;Parent=HG03521_ch_T0000291;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000291:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9277346	9278841	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000291;gene_id=HG03521_ch_G0000106;Parent=HG03521_ch_T0000291;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000291:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9278842	9278987	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000291;gene_id=HG03521_ch_G0000106;Parent=HG03521_ch_T0000291;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000291:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9278988	9279073	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000291;gene_id=HG03521_ch_G0000106;Parent=HG03521_ch_T0000291;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000291:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9279074	9279264	.	-	.	source_transcript=hg002_chrY_paternal_195.1;source_transcript_name=hg002_chrY_paternal_195.1;source_gene=hg002_chrY_paternal_195;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_195;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_195.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_195.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_183.1;transcript_id=HG03521_ch_T0000291;gene_id=HG03521_ch_G0000106;Parent=HG03521_ch_T0000291;transcript_name=hg002_chrY_paternal_195.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000291:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9281789	9284585	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_200;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;gene_id=HG03521_ch_G0000107;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000107;Name=TSPY10
HG03521_chrY	CAT	transcript	9281789	9284585	100	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_G0000107;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG03521_ch_T0000292;Name=TSPY10
HG03521_chrY	CAT	exon	9281789	9282320	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9281835	9282320	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9281835	9281837	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000292;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9282321	9282927	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000292:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9282928	9283005	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9282928	9283005	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283006	9283133	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000292:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283134	9283245	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9283134	9283245	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283246	9283346	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000292:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283347	9283492	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9283347	9283492	.	+	2	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283493	9283598	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000292:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283599	9283680	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9283599	9283680	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283681	9284374	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000292:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9284375	9284585	.	+	.	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000292:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9284375	9284397	.	+	2	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000292:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9284395	9284397	.	+	0	source_transcript=hg002_chrY_paternal_200.1;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.1,hg002_chrY_paternal_202.1;transcript_id=HG03521_ch_T0000292;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000292;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000292;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9281789	9284585	100	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_G0000107;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG03521_ch_T0000293;Name=TSPY10
HG03521_chrY	CAT	exon	9281789	9282320	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9281835	9282320	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9281835	9281837	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9282321	9282927	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000293:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9282928	9283005	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9282928	9283005	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283006	9283133	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000293:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283134	9283245	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9283134	9283245	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283246	9283346	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000293:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283347	9283492	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9283347	9283492	.	+	2	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283493	9283587	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000293:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283588	9283680	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9283588	9283650	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9283648	9283650	.	+	0	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000293;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283681	9284374	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000293:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9284375	9284585	.	+	.	source_transcript=hg002_chrY_paternal_200.2;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.2,hg002_chrY_paternal_202.2;transcript_id=HG03521_ch_T0000293;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000293;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000293:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9281789	9284585	100	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_G0000107;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=HG03521_ch_T0000294;Name=TSPY10
HG03521_chrY	CAT	exon	9281789	9282320	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9281835	9282320	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9281835	9281837	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000294;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9282321	9282927	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000294:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9282928	9283005	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9282928	9283005	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283006	9283133	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000294:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283134	9283245	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9283134	9283245	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283246	9283353	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000294:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283354	9283492	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9283354	9283492	.	+	2	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283493	9283598	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000294:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283599	9283680	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9283599	9283650	.	+	1	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9283648	9283650	.	+	0	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000294;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283681	9284374	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000294:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9284375	9284585	.	+	.	source_transcript=hg002_chrY_paternal_200.3;source_transcript_name=hg002_chrY_paternal_200.4;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_200.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.3;transcript_id=HG03521_ch_T0000294;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000294;transcript_name=hg002_chrY_paternal_200.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000294:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9281789	9284585	1000	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_G0000107;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=HG03521_ch_T0000295;Name=TSPY10
HG03521_chrY	CAT	exon	9281789	9282320	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000295:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9282321	9282927	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000295:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9282928	9283005	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000295:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283006	9283133	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000295:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283134	9283245	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000295:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283246	9283353	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000295:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283354	9283492	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000295:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283493	9283587	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000295:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9283588	9283680	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000295:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9283681	9284374	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000295:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9284375	9284585	.	+	.	source_transcript=hg002_chrY_paternal_200.4;source_transcript_name=hg002_chrY_paternal_200.1;source_gene=hg002_chrY_paternal_200;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_200;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_200.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_200.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_184.4;transcript_id=HG03521_ch_T0000295;gene_id=HG03521_ch_G0000107;Parent=HG03521_ch_T0000295;transcript_name=hg002_chrY_paternal_200.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000295:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9293867	9299549	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_175;alternative_source_transcripts=hg002_chrY_paternal_185.1;gene_id=HG03521_ch_G0000108;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000108;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9293867	9299549	1000	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_185.1;transcript_id=HG03521_ch_T0000296;gene_id=HG03521_ch_G0000108;Parent=HG03521_ch_G0000108;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000296;Name=FAM197Y2
HG03521_chrY	CAT	exon	9293867	9293926	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_185.1;transcript_id=HG03521_ch_T0000296;gene_id=HG03521_ch_G0000108;Parent=HG03521_ch_T0000296;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000296:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9293927	9297475	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_185.1;transcript_id=HG03521_ch_T0000296;gene_id=HG03521_ch_G0000108;Parent=HG03521_ch_T0000296;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000296:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9297476	9297634	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_185.1;transcript_id=HG03521_ch_T0000296;gene_id=HG03521_ch_G0000108;Parent=HG03521_ch_T0000296;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000296:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9297635	9299126	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_185.1;transcript_id=HG03521_ch_T0000296;gene_id=HG03521_ch_G0000108;Parent=HG03521_ch_T0000296;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000296:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9299127	9299272	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_185.1;transcript_id=HG03521_ch_T0000296;gene_id=HG03521_ch_G0000108;Parent=HG03521_ch_T0000296;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000296:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9299273	9299358	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_185.1;transcript_id=HG03521_ch_T0000296;gene_id=HG03521_ch_G0000108;Parent=HG03521_ch_T0000296;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000296:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9299359	9299549	.	-	.	source_transcript=hg002_chrY_paternal_175.1;source_transcript_name=hg002_chrY_paternal_175.1;source_gene=hg002_chrY_paternal_175;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_175;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_175.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_175.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_185.1;transcript_id=HG03521_ch_T0000296;gene_id=HG03521_ch_G0000108;Parent=HG03521_ch_T0000296;transcript_name=hg002_chrY_paternal_175.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000296:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9302073	9304887	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_184;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;gene_id=HG03521_ch_G0000109;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000109;Name=TSPY4
HG03521_chrY	CAT	transcript	9302073	9304887	100	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_G0000109;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG03521_ch_T0000297;Name=TSPY4
HG03521_chrY	CAT	exon	9302073	9302622	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000297:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9302119	9302622	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000297:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9302119	9302121	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000297;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9302623	9303229	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000297:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303230	9303307	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000297:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303230	9303307	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000297:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303308	9303435	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000297:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303436	9303547	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000297:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303436	9303547	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000297:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303548	9303648	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000297:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303649	9303794	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000297:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303649	9303794	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000297:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303795	9303900	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000297:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303901	9303982	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000297:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303901	9303982	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000297:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303983	9304676	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000297:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9304677	9304887	.	+	.	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000297:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9304677	9304699	.	+	2	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000297:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9304697	9304699	.	+	0	source_transcript=hg002_chrY_paternal_184.1;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.1,hg002_chrY_paternal_204.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000297;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000297;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000297;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9302073	9304887	100	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_G0000109;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG03521_ch_T0000298;Name=TSPY4
HG03521_chrY	CAT	exon	9302073	9302622	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000298:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9302119	9302622	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000298:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9302119	9302121	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000298;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9302623	9303229	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000298:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303230	9303307	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000298:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303230	9303307	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000298:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303308	9303435	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000298:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303436	9303547	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000298:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303436	9303547	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000298:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303548	9303648	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000298:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303649	9303794	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000298:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303649	9303794	.	+	2	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000298:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303795	9303889	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000298:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303890	9303982	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000298:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303890	9303952	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000298:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9303950	9303952	.	+	0	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000298;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303983	9304676	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000298:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9304677	9304887	.	+	.	source_transcript=hg002_chrY_paternal_184.2;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.2,hg002_chrY_paternal_204.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000298;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000298;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000298:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9302073	9304887	100	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_G0000109;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=HG03521_ch_T0000299;Name=TSPY4
HG03521_chrY	CAT	exon	9302073	9302622	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000299:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9302119	9302622	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000299:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9302119	9302121	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000299;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9302623	9303229	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000299:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303230	9303307	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000299:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303230	9303307	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000299:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303308	9303435	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000299:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303436	9303547	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000299:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303436	9303547	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000299:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303548	9303655	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000299:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303656	9303794	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000299:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303656	9303794	.	+	2	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000299:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303795	9303900	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000299:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303901	9303982	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000299:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9303901	9303952	.	+	1	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000299:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9303950	9303952	.	+	0	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000299;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303983	9304676	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000299:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9304677	9304887	.	+	.	source_transcript=hg002_chrY_paternal_184.3;source_transcript_name=hg002_chrY_paternal_184.4;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_184.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.3,hg002_chrY_paternal_204.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000299;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000299;transcript_name=hg002_chrY_paternal_184.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000299:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9302073	9304887	1000	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_G0000109;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=HG03521_ch_T0000300;Name=TSPY4
HG03521_chrY	CAT	exon	9302073	9302622	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000300:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9302623	9303229	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000300:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303230	9303307	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000300:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303308	9303435	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000300:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303436	9303547	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000300:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303548	9303655	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000300:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303656	9303794	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000300:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303795	9303889	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000300:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9303890	9303982	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000300:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9303983	9304676	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000300:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9304677	9304887	.	+	.	source_transcript=hg002_chrY_paternal_184.4;source_transcript_name=hg002_chrY_paternal_184.1;source_gene=hg002_chrY_paternal_184;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_184;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_184.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_184.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_186.4,hg002_chrY_paternal_204.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000300;gene_id=HG03521_ch_G0000109;Parent=HG03521_ch_T0000300;transcript_name=hg002_chrY_paternal_184.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000300:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9314153	9319764	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_225;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;gene_id=HG03521_ch_G0000110;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03521_ch_G0000110;Name=FAM197Y3
HG03521_chrY	CAT	transcript	9314153	9319764	1000	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03521_ch_T0000301;gene_id=HG03521_ch_G0000110;Parent=HG03521_ch_G0000110;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000301;Name=FAM197Y3
HG03521_chrY	CAT	exon	9314153	9314212	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03521_ch_T0000301;gene_id=HG03521_ch_G0000110;Parent=HG03521_ch_T0000301;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000301:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9314213	9317763	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03521_ch_T0000301;gene_id=HG03521_ch_G0000110;Parent=HG03521_ch_T0000301;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000301:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9317764	9317922	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03521_ch_T0000301;gene_id=HG03521_ch_G0000110;Parent=HG03521_ch_T0000301;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000301:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9317923	9319430	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03521_ch_T0000301;gene_id=HG03521_ch_G0000110;Parent=HG03521_ch_T0000301;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000301:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9319431	9319576	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03521_ch_T0000301;gene_id=HG03521_ch_G0000110;Parent=HG03521_ch_T0000301;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000301:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9319577	9319662	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03521_ch_T0000301;gene_id=HG03521_ch_G0000110;Parent=HG03521_ch_T0000301;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000301:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9319663	9319764	.	-	.	source_transcript=hg002_chrY_paternal_225.1;source_transcript_name=hg002_chrY_paternal_225.1;source_gene=hg002_chrY_paternal_225;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_225;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_225.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_225.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_187.1,hg002_chrY_paternal_205.1;transcript_id=HG03521_ch_T0000301;gene_id=HG03521_ch_G0000110;Parent=HG03521_ch_T0000301;transcript_name=hg002_chrY_paternal_225.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000301:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9322377	9325173	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_226;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;gene_id=HG03521_ch_G0000111;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000111;Name=TSPY10
HG03521_chrY	CAT	transcript	9322377	9325173	100	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_G0000111;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG03521_ch_T0000302;Name=TSPY10
HG03521_chrY	CAT	exon	9322377	9322908	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000302:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9322423	9322908	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000302:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9322423	9322425	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000302;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9322909	9323515	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000302:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323516	9323593	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000302:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9323516	9323593	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000302:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9323594	9323721	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000302:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323722	9323833	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000302:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9323722	9323833	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000302:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9323834	9323934	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000302:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323935	9324080	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000302:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9323935	9324080	.	+	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000302:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9324081	9324186	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000302:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9324187	9324268	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000302:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9324187	9324268	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000302:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9324269	9324962	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000302:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9324963	9325173	.	+	.	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000302:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9324963	9324985	.	+	2	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000302:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9324983	9324985	.	+	0	source_transcript=hg002_chrY_paternal_226.1;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.1,hg002_chrY_paternal_206.1;transcript_id=HG03521_ch_T0000302;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000302;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000302;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9322377	9325173	100	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_G0000111;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG03521_ch_T0000303;Name=TSPY10
HG03521_chrY	CAT	exon	9322377	9322908	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000303:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9322423	9322908	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000303:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9322423	9322425	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000303;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9322909	9323515	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000303:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323516	9323593	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000303:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9323516	9323593	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000303:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9323594	9323721	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000303:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323722	9323833	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000303:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9323722	9323833	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000303:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9323834	9323934	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000303:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323935	9324080	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000303:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9323935	9324080	.	+	2	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000303:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9324081	9324175	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000303:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9324176	9324268	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000303:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9324176	9324238	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000303:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9324236	9324238	.	+	0	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000303;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9324269	9324962	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000303:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9324963	9325173	.	+	.	source_transcript=hg002_chrY_paternal_226.2;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.2,hg002_chrY_paternal_206.2;transcript_id=HG03521_ch_T0000303;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000303;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000303:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9322377	9325173	100	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_G0000111;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=HG03521_ch_T0000304;Name=TSPY10
HG03521_chrY	CAT	exon	9322377	9322908	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000304:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9322423	9322908	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000304:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9322423	9322425	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000304;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9322909	9323515	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000304:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323516	9323593	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000304:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9323516	9323593	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000304:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9323594	9323721	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000304:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323722	9323833	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000304:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9323722	9323833	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000304:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9323834	9323941	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000304:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323942	9324080	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000304:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9323942	9324080	.	+	2	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000304:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9324081	9324186	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000304:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9324187	9324268	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000304:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9324187	9324238	.	+	1	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000304:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9324236	9324238	.	+	0	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000304;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9324269	9324962	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000304:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9324963	9325173	.	+	.	source_transcript=hg002_chrY_paternal_226.3;source_transcript_name=hg002_chrY_paternal_226.4;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_226.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.3,hg002_chrY_paternal_206.3;transcript_id=HG03521_ch_T0000304;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000304;transcript_name=hg002_chrY_paternal_226.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000304:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9322377	9325173	1000	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_G0000111;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=HG03521_ch_T0000305;Name=TSPY10
HG03521_chrY	CAT	exon	9322377	9322908	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000305:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9322909	9323515	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000305:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323516	9323593	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000305:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9323594	9323721	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000305:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323722	9323833	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000305:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9323834	9323941	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000305:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9323942	9324080	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000305:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9324081	9324175	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000305:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9324176	9324268	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000305:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9324269	9324962	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000305:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9324963	9325173	.	+	.	source_transcript=hg002_chrY_paternal_226.4;source_transcript_name=hg002_chrY_paternal_226.1;source_gene=hg002_chrY_paternal_226;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_226;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_226.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_226.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_190.4,hg002_chrY_paternal_206.4;transcript_id=HG03521_ch_T0000305;gene_id=HG03521_ch_G0000111;Parent=HG03521_ch_T0000305;transcript_name=hg002_chrY_paternal_226.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000305:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9334442	9340136	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_209;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;gene_id=HG03521_ch_G0000112;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000112;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9334442	9340136	1000	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03521_ch_T0000306;gene_id=HG03521_ch_G0000112;Parent=HG03521_ch_G0000112;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000306;Name=FAM197Y2
HG03521_chrY	CAT	exon	9334442	9334501	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03521_ch_T0000306;gene_id=HG03521_ch_G0000112;Parent=HG03521_ch_T0000306;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000306:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9334502	9338052	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03521_ch_T0000306;gene_id=HG03521_ch_G0000112;Parent=HG03521_ch_T0000306;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000306:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9338053	9338211	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03521_ch_T0000306;gene_id=HG03521_ch_G0000112;Parent=HG03521_ch_T0000306;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000306:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9338212	9339713	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03521_ch_T0000306;gene_id=HG03521_ch_G0000112;Parent=HG03521_ch_T0000306;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000306:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9339714	9339859	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03521_ch_T0000306;gene_id=HG03521_ch_G0000112;Parent=HG03521_ch_T0000306;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000306:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9339860	9339945	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03521_ch_T0000306;gene_id=HG03521_ch_G0000112;Parent=HG03521_ch_T0000306;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000306:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9339946	9340136	.	-	.	source_transcript=hg002_chrY_paternal_209.1;source_transcript_name=hg002_chrY_paternal_209.1;source_gene=hg002_chrY_paternal_209;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_209;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_209.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_209.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_191.1,hg002_chrY_paternal_207.1;transcript_id=HG03521_ch_T0000306;gene_id=HG03521_ch_G0000112;Parent=HG03521_ch_T0000306;transcript_name=hg002_chrY_paternal_209.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000306:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9342660	9345457	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_180;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;gene_id=HG03521_ch_G0000113;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000113;Name=TSPY10
HG03521_chrY	CAT	transcript	9342660	9345457	100	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_G0000113;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=HG03521_ch_T0000307;Name=TSPY10
HG03521_chrY	CAT	exon	9342660	9343191	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000307:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9342706	9343191	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000307:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9342706	9342708	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000307;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9343192	9343798	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000307:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9343799	9343876	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000307:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9343799	9343876	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000307:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9343877	9344004	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000307:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344005	9344116	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000307:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9344005	9344116	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000307:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344117	9344217	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000307:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344218	9344363	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000307:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9344218	9344363	.	+	2	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000307:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344364	9344469	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000307:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344470	9344551	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000307:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9344470	9344551	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000307:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344552	9345245	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000307:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9345246	9345457	.	+	.	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000307:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9345246	9345268	.	+	2	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000307:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9345266	9345268	.	+	0	source_transcript=hg002_chrY_paternal_180.1;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.1,hg002_chrY_paternal_208.1;transcript_id=HG03521_ch_T0000307;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000307;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000307;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9342660	9345457	100	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_G0000113;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=HG03521_ch_T0000308;Name=TSPY10
HG03521_chrY	CAT	exon	9342660	9343191	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000308:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9342706	9343191	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000308:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9342706	9342708	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000308;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9343192	9343798	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000308:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9343799	9343876	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000308:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9343799	9343876	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000308:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9343877	9344004	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000308:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344005	9344116	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000308:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9344005	9344116	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000308:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344117	9344217	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000308:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344218	9344363	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000308:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9344218	9344363	.	+	2	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000308:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344364	9344458	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000308:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344459	9344551	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000308:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9344459	9344521	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000308:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9344519	9344521	.	+	0	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000308;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344552	9345245	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000308:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9345246	9345457	.	+	.	source_transcript=hg002_chrY_paternal_180.2;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.2,hg002_chrY_paternal_208.2;transcript_id=HG03521_ch_T0000308;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000308;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000308:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9342660	9345457	100	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_G0000113;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=HG03521_ch_T0000309;Name=TSPY10
HG03521_chrY	CAT	exon	9342660	9343191	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000309:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9342706	9343191	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000309:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9342706	9342708	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000309;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9343192	9343798	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000309:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9343799	9343876	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000309:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9343799	9343876	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000309:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9343877	9344004	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000309:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344005	9344116	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000309:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9344005	9344116	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000309:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344117	9344224	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000309:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344225	9344363	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000309:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9344225	9344363	.	+	2	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000309:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344364	9344469	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000309:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344470	9344551	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000309:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9344470	9344521	.	+	1	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000309:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9344519	9344521	.	+	0	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000309;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344552	9345245	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000309:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9345246	9345457	.	+	.	source_transcript=hg002_chrY_paternal_180.3;source_transcript_name=hg002_chrY_paternal_180.4;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_180.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_192.3,hg002_chrY_paternal_208.3;transcript_id=HG03521_ch_T0000309;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000309;transcript_name=hg002_chrY_paternal_180.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000309:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9342660	9345457	1000	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_G0000113;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=HG03521_ch_T0000310;Name=TSPY10
HG03521_chrY	CAT	exon	9342660	9343191	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000310:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9343192	9343798	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000310:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9343799	9343876	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000310:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9343877	9344004	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000310:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344005	9344116	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000310:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344117	9344224	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000310:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344225	9344363	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000310:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344364	9344458	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000310:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9344459	9344551	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000310:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9344552	9345245	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000310:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9345246	9345457	.	+	.	source_transcript=hg002_chrY_paternal_180.4;source_transcript_name=hg002_chrY_paternal_180.1;source_gene=hg002_chrY_paternal_180;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_180;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_180.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_180.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_208.4,hg002_chrY_paternal_192.4;transcript_id=HG03521_ch_T0000310;gene_id=HG03521_ch_G0000113;Parent=HG03521_ch_T0000310;transcript_name=hg002_chrY_paternal_180.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000310:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9354763	9360449	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_165;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;gene_id=HG03521_ch_G0000114;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000114;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9354763	9360449	1000	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03521_ch_T0000311;gene_id=HG03521_ch_G0000114;Parent=HG03521_ch_G0000114;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000311;Name=FAM197Y2
HG03521_chrY	CAT	exon	9354763	9354822	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03521_ch_T0000311;gene_id=HG03521_ch_G0000114;Parent=HG03521_ch_T0000311;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000311:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9354823	9358369	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03521_ch_T0000311;gene_id=HG03521_ch_G0000114;Parent=HG03521_ch_T0000311;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000311:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9358370	9358528	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03521_ch_T0000311;gene_id=HG03521_ch_G0000114;Parent=HG03521_ch_T0000311;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000311:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9358529	9360026	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03521_ch_T0000311;gene_id=HG03521_ch_G0000114;Parent=HG03521_ch_T0000311;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000311:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9360027	9360172	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03521_ch_T0000311;gene_id=HG03521_ch_G0000114;Parent=HG03521_ch_T0000311;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000311:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9360173	9360258	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03521_ch_T0000311;gene_id=HG03521_ch_G0000114;Parent=HG03521_ch_T0000311;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000311:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9360259	9360449	.	-	.	source_transcript=hg002_chrY_paternal_165.1;source_transcript_name=hg002_chrY_paternal_165.1;source_gene=hg002_chrY_paternal_165;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_165;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_165.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_165.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_193.1,hg002_chrY_paternal_209.1;transcript_id=HG03521_ch_T0000311;gene_id=HG03521_ch_G0000114;Parent=HG03521_ch_T0000311;transcript_name=hg002_chrY_paternal_165.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000311:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9362974	9365770	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_214;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;gene_id=HG03521_ch_G0000115;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03521_ch_G0000115;Name=TSPY1
HG03521_chrY	CAT	transcript	9362974	9365770	100	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_G0000115;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03521_ch_T0000312;Name=TSPY1
HG03521_chrY	CAT	exon	9362974	9363505	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000312:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9363020	9363505	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000312:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9363020	9363022	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000312;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9363506	9364112	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000312:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364113	9364190	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000312:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364113	9364190	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000312:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364191	9364318	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000312:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364319	9364430	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000312:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364319	9364430	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000312:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364431	9364531	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000312:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364532	9364677	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000312:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364532	9364677	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000312:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364678	9364783	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000312:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364784	9364865	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000312:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364784	9364865	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000312:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364866	9365559	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000312:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9365560	9365770	.	+	.	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000312:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9365560	9365582	.	+	2	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000312:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9365580	9365582	.	+	0	source_transcript=hg002_chrY_paternal_214.3;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.1,hg002_chrY_paternal_210.1;transcript_id=HG03521_ch_T0000312;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000312;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000312;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9362974	9365770	100	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_G0000115;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03521_ch_T0000313;Name=TSPY1
HG03521_chrY	CAT	exon	9362974	9363505	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000313:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9363020	9363505	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000313:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9363020	9363022	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000313;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9363506	9364112	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000313:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364113	9364190	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000313:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364113	9364190	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000313:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364191	9364318	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000313:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364319	9364430	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000313:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364319	9364430	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000313:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364431	9364531	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000313:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364532	9364677	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000313:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364532	9364677	.	+	2	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000313:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364678	9364772	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000313:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364773	9364865	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000313:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364773	9364835	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000313:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9364833	9364835	.	+	0	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000313;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364866	9365559	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000313:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9365560	9365770	.	+	.	source_transcript=hg002_chrY_paternal_214.1;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.2,hg002_chrY_paternal_210.2;transcript_id=HG03521_ch_T0000313;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000313;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000313:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9362974	9365770	100	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_G0000115;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03521_ch_T0000314;Name=TSPY1
HG03521_chrY	CAT	exon	9362974	9363505	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000314:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9363020	9363505	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000314:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9363020	9363022	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000314;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9363506	9364112	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000314:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364113	9364190	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000314:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364113	9364190	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000314:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364191	9364318	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000314:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364319	9364430	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000314:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364319	9364430	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000314:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364431	9364538	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000314:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364539	9364677	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000314:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364539	9364677	.	+	2	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000314:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364678	9364783	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000314:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364784	9364865	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000314:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364784	9364835	.	+	1	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000314:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9364833	9364835	.	+	0	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000314;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364866	9365559	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000314:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9365560	9365770	.	+	.	source_transcript=hg002_chrY_paternal_214.4;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.3;transcript_id=HG03521_ch_T0000314;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000314;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000314:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9362974	9365770	100	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_G0000115;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=HG03521_ch_T0000315;Name=TSPY1
HG03521_chrY	CAT	exon	9362974	9363106	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000315:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9363020	9363106	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000315:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9363020	9363022	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000315;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9363107	9363367	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000315:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9363368	9363505	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000315:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9363368	9363505	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000315:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9363506	9364112	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000315:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364113	9364190	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000315:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364113	9364190	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000315:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364191	9364318	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000315:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364319	9364430	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000315:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364319	9364430	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000315:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364431	9364531	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000315:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364532	9364677	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000315:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364532	9364677	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000315:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364678	9364783	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000315:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364784	9364865	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000315:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9364784	9364865	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000315:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364866	9365559	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000315:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9365560	9365770	.	+	.	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000315:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9365560	9365582	.	+	2	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000315:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9365580	9365582	.	+	0	source_transcript=hg002_chrY_paternal_214.2;source_transcript_name=hg002_chrY_paternal_214.5;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_214.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000315;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000315;transcript_name=hg002_chrY_paternal_214.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000315;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9362974	9365770	1000	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_G0000115;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=HG03521_ch_T0000316;Name=TSPY1
HG03521_chrY	CAT	exon	9362974	9363505	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000316:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9363506	9364112	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000316:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364113	9364190	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000316:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364191	9364318	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000316:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364319	9364430	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000316:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364431	9364538	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000316:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364539	9364677	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000316:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364678	9364772	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000316:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9364773	9364865	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000316:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9364866	9365559	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000316:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9365560	9365770	.	+	.	source_transcript=hg002_chrY_paternal_214.5;source_transcript_name=hg002_chrY_paternal_214.1;source_gene=hg002_chrY_paternal_214;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_214;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_214.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_214.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_194.4;transcript_id=HG03521_ch_T0000316;gene_id=HG03521_ch_G0000115;Parent=HG03521_ch_T0000316;transcript_name=hg002_chrY_paternal_214.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000316:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9375063	9380661	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_211;gene_id=HG03521_ch_G0000116;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff,transMap_pairwise;ID=HG03521_ch_G0000116;Name=FAM197Y3
HG03521_chrY	CAT	transcript	9375063	9380661	1000	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000317;gene_id=HG03521_ch_G0000116;Parent=HG03521_ch_G0000116;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000317;Name=FAM197Y3
HG03521_chrY	CAT	exon	9375063	9375122	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000317;gene_id=HG03521_ch_G0000116;Parent=HG03521_ch_T0000317;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000317:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9375123	9378671	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000317;gene_id=HG03521_ch_G0000116;Parent=HG03521_ch_T0000317;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000317:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9378672	9378830	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000317;gene_id=HG03521_ch_G0000116;Parent=HG03521_ch_T0000317;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000317:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9378831	9380327	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000317;gene_id=HG03521_ch_G0000116;Parent=HG03521_ch_T0000317;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000317:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9380328	9380473	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000317;gene_id=HG03521_ch_G0000116;Parent=HG03521_ch_T0000317;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000317:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9380474	9380559	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000317;gene_id=HG03521_ch_G0000116;Parent=HG03521_ch_T0000317;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000317:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9380560	9380661	.	-	.	source_transcript=hg002_chrY_paternal_211.1;source_transcript_name=hg002_chrY_paternal_211.1;source_gene=hg002_chrY_paternal_211;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_211;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_211.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_211.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000317;gene_id=HG03521_ch_G0000116;Parent=HG03521_ch_T0000317;transcript_name=hg002_chrY_paternal_211.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000317:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9383274	9386070	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_196;gene_id=HG03521_ch_G0000117;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG03521_ch_G0000117;Name=TSPY1
HG03521_chrY	CAT	transcript	9383274	9386070	9970	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_G0000117;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=HG03521_ch_T0000318;Name=TSPY1
HG03521_chrY	CAT	exon	9383274	9383406	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9383320	9383406	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9383320	9383322	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000318;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9383407	9383667	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000318:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9383668	9383805	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9383668	9383805	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9383806	9384412	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000318:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9384413	9384490	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9384413	9384490	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9384491	9384618	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000318:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9384619	9384730	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9384619	9384730	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9384731	9384831	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000318:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9384832	9384977	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9384832	9384977	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9384978	9385083	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000318:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9385084	9385165	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000318:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9385084	9385165	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000318:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9385166	9385859	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000318:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9385860	9386070	.	+	.	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000318:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9385860	9385882	.	+	2	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000318:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9385880	9385882	.	+	0	source_transcript=hg002_chrY_paternal_196.2;source_transcript_name=hg002_chrY_paternal_196.5;source_gene=hg002_chrY_paternal_196;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_196;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_196.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_196.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000318;gene_id=HG03521_ch_G0000117;Parent=HG03521_ch_T0000318;transcript_name=hg002_chrY_paternal_196.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000318;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9395340	9400955	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_201;alternative_source_transcripts=hg002_chrY_paternal_197.1;gene_id=HG03521_ch_G0000118;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03521_ch_G0000118;Name=FAM197Y3
HG03521_chrY	CAT	transcript	9395340	9400955	1000	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000319;gene_id=HG03521_ch_G0000118;Parent=HG03521_ch_G0000118;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000319;Name=FAM197Y3
HG03521_chrY	CAT	exon	9395340	9395399	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000319;gene_id=HG03521_ch_G0000118;Parent=HG03521_ch_T0000319;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000319:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9395400	9398950	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000319;gene_id=HG03521_ch_G0000118;Parent=HG03521_ch_T0000319;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000319:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9398951	9399109	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000319;gene_id=HG03521_ch_G0000118;Parent=HG03521_ch_T0000319;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000319:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9399110	9400621	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000319;gene_id=HG03521_ch_G0000118;Parent=HG03521_ch_T0000319;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000319:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9400622	9400767	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000319;gene_id=HG03521_ch_G0000118;Parent=HG03521_ch_T0000319;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000319:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9400768	9400853	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000319;gene_id=HG03521_ch_G0000118;Parent=HG03521_ch_T0000319;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000319:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9400854	9400955	.	-	.	source_transcript=hg002_chrY_paternal_201.1;source_transcript_name=hg002_chrY_paternal_201.1;source_gene=hg002_chrY_paternal_201;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_201;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_201.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_201.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_197.1;transcript_id=HG03521_ch_T0000319;gene_id=HG03521_ch_G0000118;Parent=HG03521_ch_T0000319;transcript_name=hg002_chrY_paternal_201.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000319:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9403568	9406364	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_198;alternative_source_transcripts=hg002_chrY_paternal_214.2;gene_id=HG03521_ch_G0000119;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG03521_ch_G0000119;Name=TSPY1
HG03521_chrY	CAT	transcript	9403568	9406364	9980	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_G0000119;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=HG03521_ch_T0000320;Name=TSPY1
HG03521_chrY	CAT	exon	9403568	9403700	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000320:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9403614	9403700	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000320:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9403614	9403616	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000320;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9403701	9403961	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000320:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9403962	9404099	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000320:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9403962	9404099	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000320:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9404100	9404706	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000320:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9404707	9404784	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000320:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9404707	9404784	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000320:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9404785	9404912	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000320:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9404913	9405024	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000320:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9404913	9405024	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000320:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9405025	9405125	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000320:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9405126	9405271	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000320:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9405126	9405271	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000320:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9405272	9405377	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000320:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9405378	9405459	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000320:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9405378	9405459	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000320:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9405460	9406153	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000320:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9406154	9406364	.	+	.	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000320:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9406154	9406176	.	+	2	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000320:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9406174	9406176	.	+	0	source_transcript=hg002_chrY_paternal_198.2;source_transcript_name=hg002_chrY_paternal_198.5;source_gene=hg002_chrY_paternal_198;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_198;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_198.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_198.2;transcript_score=299.85;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_214.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000320;gene_id=HG03521_ch_G0000119;Parent=HG03521_ch_T0000320;transcript_name=hg002_chrY_paternal_198.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000320;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9423849	9426645	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_166;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;gene_id=HG03521_ch_G0000120;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000120;Name=TSPY10
HG03521_chrY	CAT	transcript	9423849	9426645	9990	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_G0000120;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG03521_ch_T0000321;Name=TSPY10
HG03521_chrY	CAT	exon	9423849	9424380	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000321:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9423895	9424380	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000321:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9423895	9423897	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000321;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9424381	9424987	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000321:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9424988	9425065	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000321:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9424988	9425065	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000321:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425066	9425193	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000321:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425194	9425305	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000321:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9425194	9425305	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000321:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425306	9425406	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000321:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425407	9425552	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000321:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9425407	9425552	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000321:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425553	9425658	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000321:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425659	9425740	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000321:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9425659	9425740	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000321:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425741	9426434	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000321:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9426435	9426645	.	+	.	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000321:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9426435	9426457	.	+	2	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000321:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9426455	9426457	.	+	0	source_transcript=hg002_chrY_paternal_166.1;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.1;transcript_score=299.892;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.1,hg002_chrY_paternal_216.1;transcript_id=HG03521_ch_T0000321;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000321;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000321;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9423849	9426645	9990	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_G0000120;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG03521_ch_T0000322;Name=TSPY10
HG03521_chrY	CAT	exon	9423849	9424380	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000322:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9423895	9424380	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000322:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9423895	9423897	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000322;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9424381	9424987	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000322:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9424988	9425065	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000322:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9424988	9425065	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000322:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425066	9425193	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000322:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425194	9425305	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000322:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9425194	9425305	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000322:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425306	9425406	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000322:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425407	9425552	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000322:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9425407	9425552	.	+	2	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000322:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425553	9425647	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000322:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425648	9425740	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000322:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9425648	9425710	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000322:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9425708	9425710	.	+	0	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000322;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425741	9426434	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000322:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9426435	9426645	.	+	.	source_transcript=hg002_chrY_paternal_166.2;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.2;transcript_score=299.887;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.2,hg002_chrY_paternal_216.2;transcript_id=HG03521_ch_T0000322;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000322;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000322:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9423849	9426645	9990	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_G0000120;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=HG03521_ch_T0000323;Name=TSPY10
HG03521_chrY	CAT	exon	9423849	9424380	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000323:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9423895	9424380	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000323:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9423895	9423897	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000323;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9424381	9424987	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000323:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9424988	9425065	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000323:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9424988	9425065	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000323:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425066	9425193	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000323:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425194	9425305	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000323:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9425194	9425305	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000323:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425306	9425413	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000323:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425414	9425552	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000323:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9425414	9425552	.	+	2	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000323:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425553	9425658	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000323:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425659	9425740	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000323:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9425659	9425710	.	+	1	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000323:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9425708	9425710	.	+	0	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000323;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425741	9426434	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000323:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9426435	9426645	.	+	.	source_transcript=hg002_chrY_paternal_166.3;source_transcript_name=hg002_chrY_paternal_166.4;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_166.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.3;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.3,hg002_chrY_paternal_216.3;transcript_id=HG03521_ch_T0000323;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000323;transcript_name=hg002_chrY_paternal_166.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000323:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9423849	9426645	1000	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_G0000120;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=HG03521_ch_T0000324;Name=TSPY10
HG03521_chrY	CAT	exon	9423849	9424380	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000324:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9424381	9424987	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000324:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9424988	9425065	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000324:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425066	9425193	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000324:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425194	9425305	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000324:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425306	9425413	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000324:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425414	9425552	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000324:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425553	9425647	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000324:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9425648	9425740	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000324:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9425741	9426434	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000324:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9426435	9426645	.	+	.	source_transcript=hg002_chrY_paternal_166.4;source_transcript_name=hg002_chrY_paternal_166.1;source_gene=hg002_chrY_paternal_166;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_166;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_166.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_166.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_204.4,hg002_chrY_paternal_216.4;transcript_id=HG03521_ch_T0000324;gene_id=HG03521_ch_G0000120;Parent=HG03521_ch_T0000324;transcript_name=hg002_chrY_paternal_166.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000324:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9435915	9441526	.	-	.	source_gene_common_name=FAM197Y5;source_gene=hg002_chrY_paternal_205;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_217.1;gene_id=HG03521_ch_G0000121;gene_biotype=lncRNA;gene_name=FAM197Y5;gene_sources=liftoff;ID=HG03521_ch_G0000121;Name=FAM197Y5
HG03521_chrY	CAT	transcript	9435915	9441526	1000	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_217.1;transcript_id=HG03521_ch_T0000325;gene_id=HG03521_ch_G0000121;Parent=HG03521_ch_G0000121;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=HG03521_ch_T0000325;Name=FAM197Y5
HG03521_chrY	CAT	exon	9435915	9435974	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_217.1;transcript_id=HG03521_ch_T0000325;gene_id=HG03521_ch_G0000121;Parent=HG03521_ch_T0000325;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03521_ch_T0000325:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9435975	9439527	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_217.1;transcript_id=HG03521_ch_T0000325;gene_id=HG03521_ch_G0000121;Parent=HG03521_ch_T0000325;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG03521_ch_T0000325:0;Name=FAM197Y5;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9439528	9439686	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_217.1;transcript_id=HG03521_ch_T0000325;gene_id=HG03521_ch_G0000121;Parent=HG03521_ch_T0000325;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03521_ch_T0000325:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9439687	9441192	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_217.1;transcript_id=HG03521_ch_T0000325;gene_id=HG03521_ch_G0000121;Parent=HG03521_ch_T0000325;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG03521_ch_T0000325:1;Name=FAM197Y5;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9441193	9441338	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_217.1;transcript_id=HG03521_ch_T0000325;gene_id=HG03521_ch_G0000121;Parent=HG03521_ch_T0000325;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03521_ch_T0000325:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9441339	9441424	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_217.1;transcript_id=HG03521_ch_T0000325;gene_id=HG03521_ch_G0000121;Parent=HG03521_ch_T0000325;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=intron:HG03521_ch_T0000325:2;Name=FAM197Y5;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9441425	9441526	.	-	.	source_transcript=hg002_chrY_paternal_205.1;source_transcript_name=hg002_chrY_paternal_205.1;source_gene=hg002_chrY_paternal_205;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_205;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_205.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_205.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y5;alternative_source_transcripts=hg002_chrY_paternal_205.1,hg002_chrY_paternal_217.1;transcript_id=HG03521_ch_T0000325;gene_id=HG03521_ch_G0000121;Parent=HG03521_ch_T0000325;transcript_name=hg002_chrY_paternal_205.1;gene_name=FAM197Y5;ID=exon:HG03521_ch_T0000325:3;Name=FAM197Y5;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9444139	9446936	.	+	.	source_gene_common_name=TSPY3;source_gene=hg002_chrY_paternal_188;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;gene_id=HG03521_ch_G0000122;gene_biotype=protein_coding;gene_name=TSPY3;gene_sources=liftoff;ID=HG03521_ch_G0000122;Name=TSPY3
HG03521_chrY	CAT	transcript	9444139	9446936	9950	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_G0000122;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=HG03521_ch_T0000326;Name=TSPY3
HG03521_chrY	CAT	exon	9444139	9444670	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000326:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9444185	9444670	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000326:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9444185	9444187	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=start_codon:HG03521_ch_T0000326;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9444671	9445277	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000326:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445278	9445355	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000326:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445278	9445355	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000326:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445356	9445483	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000326:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445484	9445595	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000326:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445484	9445595	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000326:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445596	9445696	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000326:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445697	9445842	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000326:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445697	9445842	.	+	2	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000326:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445843	9445948	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000326:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445949	9446030	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000326:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445949	9446030	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000326:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9446031	9446724	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000326:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9446725	9446936	.	+	.	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000326:5;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9446725	9446747	.	+	2	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000326:5;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9446745	9446747	.	+	0	source_transcript=hg002_chrY_paternal_188.1;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.1;transcript_score=299.784;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.1,hg002_chrY_paternal_218.1;transcript_id=HG03521_ch_T0000326;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000326;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=stop_codon:HG03521_ch_T0000326;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9444139	9446936	9950	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_G0000122;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=HG03521_ch_T0000327;Name=TSPY3
HG03521_chrY	CAT	exon	9444139	9444670	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000327:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9444185	9444670	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000327:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9444185	9444187	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=start_codon:HG03521_ch_T0000327;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9444671	9445277	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000327:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445278	9445355	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000327:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445278	9445355	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000327:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445356	9445483	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000327:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445484	9445595	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000327:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445484	9445595	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000327:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445596	9445696	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000327:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445697	9445842	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000327:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445697	9445842	.	+	2	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000327:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445843	9445937	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000327:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445938	9446030	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000327:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445938	9446000	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000327:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9445998	9446000	.	+	0	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=stop_codon:HG03521_ch_T0000327;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9446031	9446724	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000327:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9446725	9446936	.	+	.	source_transcript=hg002_chrY_paternal_188.2;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.2;transcript_score=299.774;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.2,hg002_chrY_paternal_218.2;transcript_id=HG03521_ch_T0000327;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000327;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000327:5;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9444139	9446936	9950	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_G0000122;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=HG03521_ch_T0000328;Name=TSPY3
HG03521_chrY	CAT	exon	9444139	9444670	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000328:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9444185	9444670	.	+	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000328:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9444185	9444187	.	+	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=start_codon:HG03521_ch_T0000328;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9444671	9445277	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000328:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445278	9445355	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000328:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445278	9445355	.	+	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000328:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445356	9445483	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000328:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445484	9445595	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000328:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445484	9445595	.	+	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000328:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445596	9445703	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000328:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445704	9445842	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000328:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445704	9445842	.	+	2	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000328:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445843	9445948	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000328:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445949	9446030	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000328:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9445949	9446000	.	+	1	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=CDS:HG03521_ch_T0000328:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9445998	9446000	.	+	0	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=stop_codon:HG03521_ch_T0000328;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9446031	9446724	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=intron:HG03521_ch_T0000328:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9446725	9446936	.	+	.	source_transcript=hg002_chrY_paternal_188.3;source_transcript_name=hg002_chrY_paternal_188.4;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_188.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.3;transcript_score=299.769;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.3,hg002_chrY_paternal_218.3;transcript_id=HG03521_ch_T0000328;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000328;transcript_name=hg002_chrY_paternal_188.4;gene_name=TSPY3;ID=exon:HG03521_ch_T0000328:5;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9444139	9446936	1000	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_G0000122;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=HG03521_ch_T0000329;Name=TSPY3
HG03521_chrY	CAT	exon	9444139	9444670	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG03521_ch_T0000329:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9444671	9445277	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG03521_ch_T0000329:0;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445278	9445355	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG03521_ch_T0000329:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445356	9445483	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG03521_ch_T0000329:1;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445484	9445595	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG03521_ch_T0000329:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445596	9445703	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG03521_ch_T0000329:2;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445704	9445842	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG03521_ch_T0000329:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9445843	9445937	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG03521_ch_T0000329:3;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9445938	9446030	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG03521_ch_T0000329:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9446031	9446724	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=intron:HG03521_ch_T0000329:4;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9446725	9446936	.	+	.	source_transcript=hg002_chrY_paternal_188.4;source_transcript_name=hg002_chrY_paternal_188.1;source_gene=hg002_chrY_paternal_188;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_188;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_188.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_188.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY3;alternative_source_transcripts=hg002_chrY_paternal_206.4,hg002_chrY_paternal_218.4;transcript_id=HG03521_ch_T0000329;gene_id=HG03521_ch_G0000122;Parent=HG03521_ch_T0000329;transcript_name=hg002_chrY_paternal_188.1;gene_name=TSPY3;ID=exon:HG03521_ch_T0000329:5;Name=TSPY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9456217	9461907	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_219;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;gene_id=HG03521_ch_G0000123;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000123;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9456217	9461907	1000	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03521_ch_T0000330;gene_id=HG03521_ch_G0000123;Parent=HG03521_ch_G0000123;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000330;Name=FAM197Y2
HG03521_chrY	CAT	exon	9456217	9456276	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03521_ch_T0000330;gene_id=HG03521_ch_G0000123;Parent=HG03521_ch_T0000330;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000330:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9456277	9459827	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03521_ch_T0000330;gene_id=HG03521_ch_G0000123;Parent=HG03521_ch_T0000330;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000330:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9459828	9459986	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03521_ch_T0000330;gene_id=HG03521_ch_G0000123;Parent=HG03521_ch_T0000330;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000330:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9459987	9461484	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03521_ch_T0000330;gene_id=HG03521_ch_G0000123;Parent=HG03521_ch_T0000330;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000330:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9461485	9461630	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03521_ch_T0000330;gene_id=HG03521_ch_G0000123;Parent=HG03521_ch_T0000330;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000330:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9461631	9461716	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03521_ch_T0000330;gene_id=HG03521_ch_G0000123;Parent=HG03521_ch_T0000330;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000330:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9461717	9461907	.	-	.	source_transcript=hg002_chrY_paternal_219.1;source_transcript_name=hg002_chrY_paternal_219.1;source_gene=hg002_chrY_paternal_219;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_219;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_219.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_219.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_219.1,hg002_chrY_paternal_219.1;transcript_id=HG03521_ch_T0000330;gene_id=HG03521_ch_G0000123;Parent=HG03521_ch_T0000330;transcript_name=hg002_chrY_paternal_219.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000330:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9464432	9467228	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_220;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;gene_id=HG03521_ch_G0000124;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000124;Name=TSPY1
HG03521_chrY	CAT	transcript	9464432	9467228	100	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_G0000124;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03521_ch_T0000331;Name=TSPY1
HG03521_chrY	CAT	exon	9464432	9464963	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000331:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9464478	9464963	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000331:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9464478	9464480	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000331;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9464964	9465570	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000331:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465571	9465648	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000331:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465571	9465648	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000331:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9465649	9465776	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000331:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465777	9465888	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000331:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465777	9465888	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000331:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9465889	9465989	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000331:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465990	9466135	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000331:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465990	9466135	.	+	2	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000331:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9466136	9466230	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000331:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9466231	9466323	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000331:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9466231	9466293	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000331:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9466291	9466293	.	+	0	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000331;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9466324	9467017	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000331:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9467018	9467228	.	+	.	source_transcript=hg002_chrY_paternal_220.1;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.1,hg002_chrY_paternal_220.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000331;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000331;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000331:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9464432	9467228	100	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_G0000124;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03521_ch_T0000332;Name=TSPY1
HG03521_chrY	CAT	exon	9464432	9464564	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9464478	9464564	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9464478	9464480	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000332;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9464565	9464825	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000332:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9464826	9464963	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9464826	9464963	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9464964	9465570	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000332:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465571	9465648	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465571	9465648	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9465649	9465776	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000332:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465777	9465888	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465777	9465888	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9465889	9465989	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000332:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465990	9466135	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465990	9466135	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9466136	9466241	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000332:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9466242	9466323	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000332:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9466242	9466323	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000332:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9466324	9467017	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000332:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9467018	9467228	.	+	.	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000332:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9467018	9467040	.	+	2	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000332:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9467038	9467040	.	+	0	source_transcript=hg002_chrY_paternal_220.2;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.2,hg002_chrY_paternal_220.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000332;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000332;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000332;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9464432	9467228	100	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_G0000124;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03521_ch_T0000333;Name=TSPY1
HG03521_chrY	CAT	exon	9464432	9464963	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9464478	9464963	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9464478	9464480	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000333;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9464964	9465570	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000333:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465571	9465648	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465571	9465648	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9465649	9465776	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000333:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465777	9465888	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465777	9465888	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9465889	9465989	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000333:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465990	9466135	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465990	9466135	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9466136	9466241	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000333:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9466242	9466323	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9466242	9466323	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9466324	9467017	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000333:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9467018	9467228	.	+	.	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000333:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9467018	9467040	.	+	2	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000333:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9467038	9467040	.	+	0	source_transcript=hg002_chrY_paternal_220.3;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.3,hg002_chrY_paternal_220.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000333;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000333;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000333;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9464432	9467228	100	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_G0000124;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=HG03521_ch_T0000334;Name=TSPY1
HG03521_chrY	CAT	exon	9464432	9464963	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9464478	9464963	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9464478	9464480	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000334;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9464964	9465570	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000334:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465571	9465648	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465571	9465648	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9465649	9465776	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000334:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465777	9465888	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465777	9465888	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9465889	9465996	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000334:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465997	9466135	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9465997	9466135	.	+	2	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9466136	9466241	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000334:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9466242	9466323	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9466242	9466293	.	+	1	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9466291	9466293	.	+	0	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000334;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9466324	9467017	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000334:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9467018	9467228	.	+	.	source_transcript=hg002_chrY_paternal_220.4;source_transcript_name=hg002_chrY_paternal_220.5;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_220.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.4,hg002_chrY_paternal_220.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000334;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000334;transcript_name=hg002_chrY_paternal_220.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000334:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9464432	9467228	1000	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_G0000124;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=HG03521_ch_T0000335;Name=TSPY1
HG03521_chrY	CAT	exon	9464432	9464963	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000335:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9464964	9465570	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000335:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465571	9465648	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000335:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9465649	9465776	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000335:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465777	9465888	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000335:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9465889	9465996	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000335:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9465997	9466135	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000335:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9466136	9466230	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000335:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9466231	9466323	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000335:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9466324	9467017	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000335:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9467018	9467228	.	+	.	source_transcript=hg002_chrY_paternal_220.5;source_transcript_name=hg002_chrY_paternal_220.1;source_gene=hg002_chrY_paternal_220;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_220;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_220.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_220.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_220.5,hg002_chrY_paternal_220.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000335;gene_id=HG03521_ch_G0000124;Parent=HG03521_ch_T0000335;transcript_name=hg002_chrY_paternal_220.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000335:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9476507	9482197	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_221;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;gene_id=HG03521_ch_G0000125;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000125;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9476507	9482197	1000	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03521_ch_T0000336;gene_id=HG03521_ch_G0000125;Parent=HG03521_ch_G0000125;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000336;Name=FAM197Y2
HG03521_chrY	CAT	exon	9476507	9476566	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03521_ch_T0000336;gene_id=HG03521_ch_G0000125;Parent=HG03521_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000336:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9476567	9480115	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03521_ch_T0000336;gene_id=HG03521_ch_G0000125;Parent=HG03521_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000336:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9480116	9480274	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03521_ch_T0000336;gene_id=HG03521_ch_G0000125;Parent=HG03521_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000336:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9480275	9481774	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03521_ch_T0000336;gene_id=HG03521_ch_G0000125;Parent=HG03521_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000336:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9481775	9481920	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03521_ch_T0000336;gene_id=HG03521_ch_G0000125;Parent=HG03521_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000336:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9481921	9482006	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03521_ch_T0000336;gene_id=HG03521_ch_G0000125;Parent=HG03521_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000336:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9482007	9482197	.	-	.	source_transcript=hg002_chrY_paternal_221.1;source_transcript_name=hg002_chrY_paternal_221.1;source_gene=hg002_chrY_paternal_221;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_221;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_221.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_221.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_221.1,hg002_chrY_paternal_221.1;transcript_id=HG03521_ch_T0000336;gene_id=HG03521_ch_G0000125;Parent=HG03521_ch_T0000336;transcript_name=hg002_chrY_paternal_221.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000336:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9484721	9487535	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_222;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;gene_id=HG03521_ch_G0000126;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000126;Name=TSPY4
HG03521_chrY	CAT	transcript	9484721	9487535	100	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_G0000126;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG03521_ch_T0000337;Name=TSPY4
HG03521_chrY	CAT	exon	9484721	9485270	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000337:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9484767	9485270	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000337:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9484767	9484769	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000337;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9485271	9485877	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000337:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9485878	9485955	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000337:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9485878	9485955	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000337:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9485956	9486083	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000337:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486084	9486195	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000337:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9486084	9486195	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000337:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486196	9486296	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000337:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486297	9486442	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000337:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9486297	9486442	.	+	2	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000337:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486443	9486548	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000337:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486549	9486630	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000337:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9486549	9486630	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000337:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486631	9487324	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000337:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9487325	9487535	.	+	.	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000337:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9487325	9487347	.	+	2	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000337:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9487345	9487347	.	+	0	source_transcript=hg002_chrY_paternal_222.1;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.1,hg002_chrY_paternal_222.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000337;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000337;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000337;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9484721	9487535	100	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_G0000126;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG03521_ch_T0000338;Name=TSPY4
HG03521_chrY	CAT	exon	9484721	9485270	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000338:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9484767	9485270	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000338:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9484767	9484769	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000338;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9485271	9485877	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000338:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9485878	9485955	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000338:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9485878	9485955	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000338:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9485956	9486083	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000338:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486084	9486195	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000338:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9486084	9486195	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000338:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486196	9486296	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000338:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486297	9486442	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000338:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9486297	9486442	.	+	2	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000338:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486443	9486537	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000338:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486538	9486630	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000338:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9486538	9486600	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000338:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9486598	9486600	.	+	0	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000338;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486631	9487324	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000338:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9487325	9487535	.	+	.	source_transcript=hg002_chrY_paternal_222.2;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.2,hg002_chrY_paternal_222.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000338;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000338;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000338:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9484721	9487535	100	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_G0000126;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=HG03521_ch_T0000339;Name=TSPY4
HG03521_chrY	CAT	exon	9484721	9485270	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000339:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9484767	9485270	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000339:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9484767	9484769	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000339;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9485271	9485877	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000339:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9485878	9485955	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000339:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9485878	9485955	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000339:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9485956	9486083	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000339:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486084	9486195	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000339:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9486084	9486195	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000339:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486196	9486303	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000339:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486304	9486442	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000339:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9486304	9486442	.	+	2	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000339:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486443	9486548	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000339:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486549	9486630	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000339:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9486549	9486600	.	+	1	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000339:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9486598	9486600	.	+	0	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000339;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486631	9487324	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000339:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9487325	9487535	.	+	.	source_transcript=hg002_chrY_paternal_222.3;source_transcript_name=hg002_chrY_paternal_222.4;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_222.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.3,hg002_chrY_paternal_222.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000339;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000339;transcript_name=hg002_chrY_paternal_222.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000339:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9484721	9487535	1000	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_G0000126;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=HG03521_ch_T0000340;Name=TSPY4
HG03521_chrY	CAT	exon	9484721	9485270	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000340:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9485271	9485877	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000340:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9485878	9485955	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000340:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9485956	9486083	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000340:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486084	9486195	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000340:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486196	9486303	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000340:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486304	9486442	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000340:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486443	9486537	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000340:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9486538	9486630	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000340:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9486631	9487324	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000340:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9487325	9487535	.	+	.	source_transcript=hg002_chrY_paternal_222.4;source_transcript_name=hg002_chrY_paternal_222.1;source_gene=hg002_chrY_paternal_222;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_222;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_222.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_222.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_222.4,hg002_chrY_paternal_222.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000340;gene_id=HG03521_ch_G0000126;Parent=HG03521_ch_T0000340;transcript_name=hg002_chrY_paternal_222.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000340:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9496824	9502412	.	-	.	source_gene_common_name=FAM197Y4;source_gene=hg002_chrY_paternal_223;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;gene_id=HG03521_ch_G0000127;gene_biotype=lncRNA;gene_name=FAM197Y4;gene_sources=liftoff;ID=HG03521_ch_G0000127;Name=FAM197Y4
HG03521_chrY	CAT	transcript	9496824	9502412	1000	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03521_ch_T0000341;gene_id=HG03521_ch_G0000127;Parent=HG03521_ch_G0000127;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=HG03521_ch_T0000341;Name=FAM197Y4
HG03521_chrY	CAT	exon	9496824	9496883	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03521_ch_T0000341;gene_id=HG03521_ch_G0000127;Parent=HG03521_ch_T0000341;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03521_ch_T0000341:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9496884	9500432	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03521_ch_T0000341;gene_id=HG03521_ch_G0000127;Parent=HG03521_ch_T0000341;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03521_ch_T0000341:0;Name=FAM197Y4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9500433	9500591	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03521_ch_T0000341;gene_id=HG03521_ch_G0000127;Parent=HG03521_ch_T0000341;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03521_ch_T0000341:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9500592	9502078	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03521_ch_T0000341;gene_id=HG03521_ch_G0000127;Parent=HG03521_ch_T0000341;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03521_ch_T0000341:1;Name=FAM197Y4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9502079	9502224	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03521_ch_T0000341;gene_id=HG03521_ch_G0000127;Parent=HG03521_ch_T0000341;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03521_ch_T0000341:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9502225	9502310	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03521_ch_T0000341;gene_id=HG03521_ch_G0000127;Parent=HG03521_ch_T0000341;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=intron:HG03521_ch_T0000341:2;Name=FAM197Y4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9502311	9502412	.	-	.	source_transcript=hg002_chrY_paternal_223.1;source_transcript_name=hg002_chrY_paternal_223.1;source_gene=hg002_chrY_paternal_223;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_223;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_223.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_223.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y4;alternative_source_transcripts=hg002_chrY_paternal_223.1,hg002_chrY_paternal_223.1;transcript_id=HG03521_ch_T0000341;gene_id=HG03521_ch_G0000127;Parent=HG03521_ch_T0000341;transcript_name=hg002_chrY_paternal_223.1;gene_name=FAM197Y4;ID=exon:HG03521_ch_T0000341:3;Name=FAM197Y4;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9505025	9507839	.	+	.	source_gene_common_name=TSPY4;source_gene=hg002_chrY_paternal_216;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;gene_id=HG03521_ch_G0000128;gene_biotype=protein_coding;gene_name=TSPY4;gene_sources=liftoff;ID=HG03521_ch_G0000128;Name=TSPY4
HG03521_chrY	CAT	transcript	9505025	9507839	100	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_G0000128;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG03521_ch_T0000342;Name=TSPY4
HG03521_chrY	CAT	exon	9505025	9505574	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000342:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9505071	9505574	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000342:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9505071	9505073	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000342;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9505575	9506181	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000342:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506182	9506259	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000342:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506182	9506259	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000342:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506260	9506387	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000342:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506388	9506499	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000342:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506388	9506499	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000342:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506500	9506600	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000342:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506601	9506746	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000342:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506601	9506746	.	+	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000342:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506747	9506852	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000342:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506853	9506934	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000342:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506853	9506934	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000342:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506935	9507628	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000342:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9507629	9507839	.	+	.	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000342:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9507629	9507651	.	+	2	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000342:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9507649	9507651	.	+	0	source_transcript=hg002_chrY_paternal_216.1;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.1,hg002_chrY_paternal_224.1;transcript_id=HG03521_ch_T0000342;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000342;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000342;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9505025	9507839	100	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_G0000128;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG03521_ch_T0000343;Name=TSPY4
HG03521_chrY	CAT	exon	9505025	9505574	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000343:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9505071	9505574	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000343:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9505071	9505073	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000343;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9505575	9506181	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000343:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506182	9506259	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000343:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506182	9506259	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000343:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506260	9506387	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000343:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506388	9506499	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000343:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506388	9506499	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000343:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506500	9506600	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000343:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506601	9506746	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000343:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506601	9506746	.	+	2	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000343:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506747	9506841	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000343:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506842	9506934	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000343:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506842	9506904	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000343:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9506902	9506904	.	+	0	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000343;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506935	9507628	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000343:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9507629	9507839	.	+	.	source_transcript=hg002_chrY_paternal_216.2;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;alternative_source_transcripts=hg002_chrY_paternal_224.2,hg002_chrY_paternal_224.2;transcript_id=HG03521_ch_T0000343;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000343;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000343:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9505025	9507839	100	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_G0000128;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=HG03521_ch_T0000344;Name=TSPY4
HG03521_chrY	CAT	exon	9505025	9505574	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000344:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9505071	9505574	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000344:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9505071	9505073	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=start_codon:HG03521_ch_T0000344;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9505575	9506181	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000344:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506182	9506259	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000344:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506182	9506259	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000344:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506260	9506387	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000344:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506388	9506499	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000344:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506388	9506499	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000344:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506500	9506607	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000344:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506608	9506746	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000344:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506608	9506746	.	+	2	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000344:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506747	9506852	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000344:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506853	9506934	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000344:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9506853	9506904	.	+	1	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=CDS:HG03521_ch_T0000344:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9506902	9506904	.	+	0	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=stop_codon:HG03521_ch_T0000344;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506935	9507628	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=intron:HG03521_ch_T0000344:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9507629	9507839	.	+	.	source_transcript=hg002_chrY_paternal_216.3;source_transcript_name=hg002_chrY_paternal_216.4;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_216.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000344;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000344;transcript_name=hg002_chrY_paternal_216.4;gene_name=TSPY4;ID=exon:HG03521_ch_T0000344:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9505025	9507839	1000	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_G0000128;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=HG03521_ch_T0000345;Name=TSPY4
HG03521_chrY	CAT	exon	9505025	9505574	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000345:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9505575	9506181	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000345:0;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506182	9506259	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000345:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506260	9506387	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000345:1;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506388	9506499	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000345:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506500	9506607	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000345:2;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506608	9506746	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000345:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506747	9506841	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000345:3;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9506842	9506934	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000345:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9506935	9507628	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=intron:HG03521_ch_T0000345:4;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9507629	9507839	.	+	.	source_transcript=hg002_chrY_paternal_216.4;source_transcript_name=hg002_chrY_paternal_216.1;source_gene=hg002_chrY_paternal_216;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_216;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_216.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_216.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY4;transcript_id=HG03521_ch_T0000345;gene_id=HG03521_ch_G0000128;Parent=HG03521_ch_T0000345;transcript_name=hg002_chrY_paternal_216.1;gene_name=TSPY4;ID=exon:HG03521_ch_T0000345:5;Name=TSPY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9517109	9522718	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_167;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;gene_id=HG03521_ch_G0000129;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03521_ch_G0000129;Name=FAM197Y3
HG03521_chrY	CAT	transcript	9517109	9522718	1000	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03521_ch_T0000346;gene_id=HG03521_ch_G0000129;Parent=HG03521_ch_G0000129;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000346;Name=FAM197Y3
HG03521_chrY	CAT	exon	9517109	9517168	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03521_ch_T0000346;gene_id=HG03521_ch_G0000129;Parent=HG03521_ch_T0000346;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000346:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9517169	9520719	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03521_ch_T0000346;gene_id=HG03521_ch_G0000129;Parent=HG03521_ch_T0000346;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000346:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9520720	9520878	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03521_ch_T0000346;gene_id=HG03521_ch_G0000129;Parent=HG03521_ch_T0000346;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000346:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9520879	9522384	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03521_ch_T0000346;gene_id=HG03521_ch_G0000129;Parent=HG03521_ch_T0000346;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000346:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9522385	9522530	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03521_ch_T0000346;gene_id=HG03521_ch_G0000129;Parent=HG03521_ch_T0000346;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000346:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9522531	9522616	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03521_ch_T0000346;gene_id=HG03521_ch_G0000129;Parent=HG03521_ch_T0000346;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000346:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9522617	9522718	.	-	.	source_transcript=hg002_chrY_paternal_167.1;source_transcript_name=hg002_chrY_paternal_167.1;source_gene=hg002_chrY_paternal_167;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_167;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_167.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_167.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_225.1,hg002_chrY_paternal_225.1;transcript_id=HG03521_ch_T0000346;gene_id=HG03521_ch_G0000129;Parent=HG03521_ch_T0000346;transcript_name=hg002_chrY_paternal_167.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000346:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9525327	9528123	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_232;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;gene_id=HG03521_ch_G0000130;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff;ID=HG03521_ch_G0000130;Name=TSPY1
HG03521_chrY	CAT	transcript	9525327	9528123	100	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_G0000130;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03521_ch_T0000347;Name=TSPY1
HG03521_chrY	CAT	exon	9525327	9525858	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000347:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9525373	9525858	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000347:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9525373	9525375	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000347;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9525859	9526465	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000347:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526466	9526543	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000347:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526466	9526543	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000347:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9526544	9526671	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000347:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526672	9526783	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000347:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526672	9526783	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000347:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9526784	9526884	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000347:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526885	9527030	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000347:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526885	9527030	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000347:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9527031	9527136	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000347:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9527137	9527218	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000347:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9527137	9527218	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000347:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9527219	9527912	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000347:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9527913	9528123	.	+	.	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000347:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9527913	9527935	.	+	2	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000347:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9527933	9527935	.	+	0	source_transcript=hg002_chrY_paternal_232.3;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.1,hg002_chrY_paternal_226.1;transcript_id=HG03521_ch_T0000347;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000347;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000347;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9525327	9528123	100	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_G0000130;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03521_ch_T0000348;Name=TSPY1
HG03521_chrY	CAT	exon	9525327	9525858	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000348:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9525373	9525858	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000348:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9525373	9525375	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000348;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9525859	9526465	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000348:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526466	9526543	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000348:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526466	9526543	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000348:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9526544	9526671	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000348:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526672	9526783	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000348:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526672	9526783	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000348:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9526784	9526884	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000348:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526885	9527030	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000348:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526885	9527030	.	+	2	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000348:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9527031	9527125	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000348:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9527126	9527218	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000348:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9527126	9527188	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000348:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9527186	9527188	.	+	0	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000348;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9527219	9527912	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000348:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9527913	9528123	.	+	.	source_transcript=hg002_chrY_paternal_232.1;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.2,hg002_chrY_paternal_226.2;transcript_id=HG03521_ch_T0000348;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000348;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000348:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9525327	9528123	100	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_G0000130;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03521_ch_T0000349;Name=TSPY1
HG03521_chrY	CAT	exon	9525327	9525858	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000349:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9525373	9525858	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000349:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9525373	9525375	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000349;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9525859	9526465	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000349:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526466	9526543	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000349:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526466	9526543	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000349:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9526544	9526671	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000349:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526672	9526783	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000349:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526672	9526783	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000349:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9526784	9526891	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000349:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526892	9527030	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000349:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526892	9527030	.	+	2	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000349:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9527031	9527136	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000349:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9527137	9527218	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000349:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9527137	9527188	.	+	1	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000349:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9527186	9527188	.	+	0	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000349;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9527219	9527912	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000349:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9527913	9528123	.	+	.	source_transcript=hg002_chrY_paternal_232.4;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.3,hg002_chrY_paternal_226.3;transcript_id=HG03521_ch_T0000349;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000349;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000349:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9525327	9528123	100	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_G0000130;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03521_ch_T0000350;Name=TSPY1
HG03521_chrY	CAT	exon	9525327	9525459	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000350:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9525373	9525459	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000350:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9525373	9525375	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000350;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9525460	9525720	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000350:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9525721	9525858	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000350:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9525721	9525858	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000350:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9525859	9526465	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000350:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526466	9526543	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000350:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526466	9526543	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000350:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9526544	9526671	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000350:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526672	9526783	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000350:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526672	9526783	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000350:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9526784	9526884	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000350:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526885	9527030	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000350:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9526885	9527030	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000350:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9527031	9527136	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000350:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9527137	9527218	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000350:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9527137	9527218	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000350:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9527219	9527912	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000350:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9527913	9528123	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000350:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9527913	9527935	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000350:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9527933	9527935	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;transcript_id=HG03521_ch_T0000350;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000350;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000350;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9525327	9528123	1000	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_G0000130;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=HG03521_ch_T0000351;Name=TSPY1
HG03521_chrY	CAT	exon	9525327	9525858	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000351:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9525859	9526465	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000351:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526466	9526543	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000351:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9526544	9526671	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000351:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526672	9526783	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000351:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9526784	9526891	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000351:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9526892	9527030	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000351:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9527031	9527125	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000351:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9527126	9527218	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000351:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9527219	9527912	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000351:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9527913	9528123	.	+	.	source_transcript=hg002_chrY_paternal_232.5;source_transcript_name=hg002_chrY_paternal_232.1;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_232.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_232.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_226.4,hg002_chrY_paternal_226.4;transcript_id=HG03521_ch_T0000351;gene_id=HG03521_ch_G0000130;Parent=HG03521_ch_T0000351;transcript_name=hg002_chrY_paternal_232.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000351:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9537392	9542996	.	-	.	source_gene_common_name=FAM197Y6;source_gene=hg002_chrY_paternal_217;gene_id=HG03521_ch_G0000131;gene_biotype=lncRNA;gene_name=FAM197Y6;gene_sources=liftoff;ID=HG03521_ch_G0000131;Name=FAM197Y6
HG03521_chrY	CAT	transcript	9537392	9542996	1000	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG03521_ch_T0000352;gene_id=HG03521_ch_G0000131;Parent=HG03521_ch_G0000131;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=HG03521_ch_T0000352;Name=FAM197Y6
HG03521_chrY	CAT	exon	9537392	9537451	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG03521_ch_T0000352;gene_id=HG03521_ch_G0000131;Parent=HG03521_ch_T0000352;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03521_ch_T0000352:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9537452	9541001	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG03521_ch_T0000352;gene_id=HG03521_ch_G0000131;Parent=HG03521_ch_T0000352;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG03521_ch_T0000352:0;Name=FAM197Y6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9541002	9541160	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG03521_ch_T0000352;gene_id=HG03521_ch_G0000131;Parent=HG03521_ch_T0000352;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03521_ch_T0000352:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9541161	9542662	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG03521_ch_T0000352;gene_id=HG03521_ch_G0000131;Parent=HG03521_ch_T0000352;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG03521_ch_T0000352:1;Name=FAM197Y6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9542663	9542808	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG03521_ch_T0000352;gene_id=HG03521_ch_G0000131;Parent=HG03521_ch_T0000352;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03521_ch_T0000352:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9542809	9542894	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG03521_ch_T0000352;gene_id=HG03521_ch_G0000131;Parent=HG03521_ch_T0000352;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=intron:HG03521_ch_T0000352:2;Name=FAM197Y6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9542895	9542996	.	-	.	source_transcript=hg002_chrY_paternal_217.1;source_transcript_name=hg002_chrY_paternal_217.1;source_gene=hg002_chrY_paternal_217;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_217;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_217.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_217.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y6;transcript_id=HG03521_ch_T0000352;gene_id=HG03521_ch_G0000131;Parent=HG03521_ch_T0000352;transcript_name=hg002_chrY_paternal_217.1;gene_name=FAM197Y6;ID=exon:HG03521_ch_T0000352:3;Name=FAM197Y6;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9545609	9548406	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_218;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;gene_id=HG03521_ch_G0000132;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff;ID=HG03521_ch_G0000132;Name=TSPY10
HG03521_chrY	CAT	transcript	9545609	9548406	100	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_G0000132;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG03521_ch_T0000353;Name=TSPY10
HG03521_chrY	CAT	exon	9545609	9546140	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000353:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9545655	9546140	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000353:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9545655	9545657	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000353;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9546141	9546747	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000353:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9546748	9546825	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000353:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9546748	9546825	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000353:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9546826	9546953	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000353:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9546954	9547065	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000353:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9546954	9547065	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000353:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547066	9547166	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000353:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9547167	9547312	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000353:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9547167	9547312	.	+	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000353:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547313	9547418	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000353:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9547419	9547500	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000353:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9547419	9547500	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000353:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547501	9548194	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000353:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9548195	9548406	.	+	.	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000353:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9548195	9548217	.	+	2	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000353:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9548215	9548217	.	+	0	source_transcript=hg002_chrY_paternal_218.1;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.1,hg002_chrY_paternal_228.1;transcript_id=HG03521_ch_T0000353;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000353;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000353;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9545609	9548406	100	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_G0000132;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG03521_ch_T0000354;Name=TSPY10
HG03521_chrY	CAT	exon	9545609	9546140	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000354:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9545655	9546140	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000354:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9545655	9545657	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000354;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9546141	9546747	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000354:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9546748	9546825	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000354:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9546748	9546825	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000354:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9546826	9546953	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000354:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9546954	9547065	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000354:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9546954	9547065	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000354:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547066	9547166	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000354:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9547167	9547312	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000354:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9547167	9547312	.	+	2	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000354:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547313	9547407	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000354:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9547408	9547500	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000354:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9547408	9547470	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000354:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9547468	9547470	.	+	0	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000354;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547501	9548194	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000354:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9548195	9548406	.	+	.	source_transcript=hg002_chrY_paternal_218.2;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.2,hg002_chrY_paternal_228.2;transcript_id=HG03521_ch_T0000354;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000354;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000354:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9545609	9548406	100	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_G0000132;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=HG03521_ch_T0000355;Name=TSPY10
HG03521_chrY	CAT	exon	9545609	9546140	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000355:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9545655	9546140	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000355:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9545655	9545657	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000355;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9546141	9546747	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000355:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9546748	9546825	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000355:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9546748	9546825	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000355:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9546826	9546953	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000355:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9546954	9547065	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000355:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9546954	9547065	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000355:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547066	9547173	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000355:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9547174	9547312	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000355:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9547174	9547312	.	+	2	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000355:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547313	9547418	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000355:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9547419	9547500	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000355:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9547419	9547470	.	+	1	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000355:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9547468	9547470	.	+	0	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000355;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547501	9548194	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000355:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9548195	9548406	.	+	.	source_transcript=hg002_chrY_paternal_218.3;source_transcript_name=hg002_chrY_paternal_218.4;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_218.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.3,hg002_chrY_paternal_228.3;transcript_id=HG03521_ch_T0000355;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000355;transcript_name=hg002_chrY_paternal_218.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000355:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9545609	9548406	1000	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_G0000132;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=HG03521_ch_T0000356;Name=TSPY10
HG03521_chrY	CAT	exon	9545609	9546140	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000356:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9546141	9546747	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000356:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9546748	9546825	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000356:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9546826	9546953	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000356:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9546954	9547065	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000356:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547066	9547173	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000356:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9547174	9547312	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000356:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547313	9547407	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000356:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9547408	9547500	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000356:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9547501	9548194	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000356:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9548195	9548406	.	+	.	source_transcript=hg002_chrY_paternal_218.4;source_transcript_name=hg002_chrY_paternal_218.1;source_gene=hg002_chrY_paternal_218;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_218;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_218.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_218.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_228.4,hg002_chrY_paternal_228.4;transcript_id=HG03521_ch_T0000356;gene_id=HG03521_ch_G0000132;Parent=HG03521_ch_T0000356;transcript_name=hg002_chrY_paternal_218.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000356:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9557710	9563392	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_229;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;gene_id=HG03521_ch_G0000133;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000133;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9557710	9563392	1000	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03521_ch_T0000357;gene_id=HG03521_ch_G0000133;Parent=HG03521_ch_G0000133;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000357;Name=FAM197Y2
HG03521_chrY	CAT	exon	9557710	9557769	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03521_ch_T0000357;gene_id=HG03521_ch_G0000133;Parent=HG03521_ch_T0000357;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000357:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9557770	9561316	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03521_ch_T0000357;gene_id=HG03521_ch_G0000133;Parent=HG03521_ch_T0000357;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000357:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9561317	9561475	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03521_ch_T0000357;gene_id=HG03521_ch_G0000133;Parent=HG03521_ch_T0000357;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000357:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9561476	9562969	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03521_ch_T0000357;gene_id=HG03521_ch_G0000133;Parent=HG03521_ch_T0000357;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000357:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9562970	9563115	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03521_ch_T0000357;gene_id=HG03521_ch_G0000133;Parent=HG03521_ch_T0000357;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000357:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9563116	9563201	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03521_ch_T0000357;gene_id=HG03521_ch_G0000133;Parent=HG03521_ch_T0000357;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000357:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9563202	9563392	.	-	.	source_transcript=hg002_chrY_paternal_229.1;source_transcript_name=hg002_chrY_paternal_229.1;source_gene=hg002_chrY_paternal_229;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_229;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_229.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_229.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_229.1,hg002_chrY_paternal_229.1;transcript_id=HG03521_ch_T0000357;gene_id=HG03521_ch_G0000133;Parent=HG03521_ch_T0000357;transcript_name=hg002_chrY_paternal_229.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000357:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9565917	9568713	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_230;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;gene_id=HG03521_ch_G0000134;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000134;Name=TSPY1
HG03521_chrY	CAT	transcript	9565917	9568713	100	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_G0000134;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03521_ch_T0000358;Name=TSPY1
HG03521_chrY	CAT	exon	9565917	9566448	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000358:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9565963	9566448	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000358:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9565963	9565965	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000358;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9566449	9567055	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000358:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567056	9567133	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000358:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567056	9567133	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000358:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567134	9567261	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000358:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567262	9567373	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000358:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567262	9567373	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000358:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567374	9567474	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000358:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567475	9567620	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000358:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567475	9567620	.	+	2	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000358:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567621	9567715	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000358:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567716	9567808	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000358:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567716	9567778	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000358:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9567776	9567778	.	+	0	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000358;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567809	9568502	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000358:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9568503	9568713	.	+	.	source_transcript=hg002_chrY_paternal_230.1;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.1,hg002_chrY_paternal_230.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000358;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000358;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000358:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9565917	9568713	100	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_G0000134;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03521_ch_T0000359;Name=TSPY1
HG03521_chrY	CAT	exon	9565917	9566049	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9565963	9566049	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9565963	9565965	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000359;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9566050	9566310	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000359:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9566311	9566448	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9566311	9566448	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9566449	9567055	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000359:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567056	9567133	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567056	9567133	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567134	9567261	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000359:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567262	9567373	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567262	9567373	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567374	9567474	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000359:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567475	9567620	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567475	9567620	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567621	9567726	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000359:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567727	9567808	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000359:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567727	9567808	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000359:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567809	9568502	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000359:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9568503	9568713	.	+	.	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000359:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9568503	9568525	.	+	2	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000359:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9568523	9568525	.	+	0	source_transcript=hg002_chrY_paternal_230.2;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.2,hg002_chrY_paternal_230.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000359;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000359;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000359;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9565917	9568713	100	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_G0000134;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03521_ch_T0000360;Name=TSPY1
HG03521_chrY	CAT	exon	9565917	9566448	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9565963	9566448	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9565963	9565965	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000360;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9566449	9567055	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000360:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567056	9567133	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567056	9567133	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567134	9567261	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000360:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567262	9567373	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567262	9567373	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567374	9567474	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000360:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567475	9567620	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567475	9567620	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567621	9567726	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000360:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567727	9567808	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567727	9567808	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567809	9568502	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000360:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9568503	9568713	.	+	.	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000360:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9568503	9568525	.	+	2	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000360:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9568523	9568525	.	+	0	source_transcript=hg002_chrY_paternal_230.3;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.3,hg002_chrY_paternal_230.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000360;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000360;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000360;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9565917	9568713	100	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_G0000134;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=HG03521_ch_T0000361;Name=TSPY1
HG03521_chrY	CAT	exon	9565917	9566448	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000361:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9565963	9566448	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000361:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9565963	9565965	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000361;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9566449	9567055	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000361:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567056	9567133	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000361:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567056	9567133	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000361:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567134	9567261	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000361:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567262	9567373	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000361:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567262	9567373	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000361:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567374	9567481	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000361:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567482	9567620	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000361:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567482	9567620	.	+	2	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000361:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567621	9567726	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000361:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567727	9567808	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000361:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9567727	9567778	.	+	1	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000361:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9567776	9567778	.	+	0	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000361;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567809	9568502	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000361:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9568503	9568713	.	+	.	source_transcript=hg002_chrY_paternal_230.4;source_transcript_name=hg002_chrY_paternal_230.5;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_230.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.4,hg002_chrY_paternal_230.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000361;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000361;transcript_name=hg002_chrY_paternal_230.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000361:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9565917	9568713	1000	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_G0000134;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=HG03521_ch_T0000362;Name=TSPY1
HG03521_chrY	CAT	exon	9565917	9566448	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000362:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9566449	9567055	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000362:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567056	9567133	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000362:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567134	9567261	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000362:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567262	9567373	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000362:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567374	9567481	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000362:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567482	9567620	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000362:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567621	9567715	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000362:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9567716	9567808	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000362:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9567809	9568502	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=intron:HG03521_ch_T0000362:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9568503	9568713	.	+	.	source_transcript=hg002_chrY_paternal_230.5;source_transcript_name=hg002_chrY_paternal_230.1;source_gene=hg002_chrY_paternal_230;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_230;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_230.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_230.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_230.5,hg002_chrY_paternal_230.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000362;gene_id=HG03521_ch_G0000134;Parent=HG03521_ch_T0000362;transcript_name=hg002_chrY_paternal_230.1;gene_name=TSPY1;ID=exon:HG03521_ch_T0000362:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9578000	9583684	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_233;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;gene_id=HG03521_ch_G0000135;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000135;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9578000	9583684	1000	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03521_ch_T0000363;gene_id=HG03521_ch_G0000135;Parent=HG03521_ch_G0000135;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000363;Name=FAM197Y2
HG03521_chrY	CAT	exon	9578000	9578059	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03521_ch_T0000363;gene_id=HG03521_ch_G0000135;Parent=HG03521_ch_T0000363;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000363:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9578060	9581608	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03521_ch_T0000363;gene_id=HG03521_ch_G0000135;Parent=HG03521_ch_T0000363;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000363:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9581609	9581767	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03521_ch_T0000363;gene_id=HG03521_ch_G0000135;Parent=HG03521_ch_T0000363;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000363:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9581768	9583261	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03521_ch_T0000363;gene_id=HG03521_ch_G0000135;Parent=HG03521_ch_T0000363;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000363:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9583262	9583407	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03521_ch_T0000363;gene_id=HG03521_ch_G0000135;Parent=HG03521_ch_T0000363;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000363:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9583408	9583493	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03521_ch_T0000363;gene_id=HG03521_ch_G0000135;Parent=HG03521_ch_T0000363;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000363:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9583494	9583684	.	-	.	source_transcript=hg002_chrY_paternal_233.1;source_transcript_name=hg002_chrY_paternal_233.1;source_gene=hg002_chrY_paternal_233;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_233;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_233.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_233.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_231.1,hg002_chrY_paternal_231.1;transcript_id=HG03521_ch_T0000363;gene_id=HG03521_ch_G0000135;Parent=HG03521_ch_T0000363;transcript_name=hg002_chrY_paternal_233.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000363:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9586208	9589004	.	+	.	source_gene_common_name=TSPY1;source_gene=hg002_chrY_paternal_232;alternative_source_transcripts=hg002_chrY_paternal_232.2;gene_id=HG03521_ch_G0000136;gene_biotype=protein_coding;gene_name=TSPY1;gene_sources=augTM,transMap;ID=HG03521_ch_G0000136;Name=TSPY1
HG03521_chrY	CAT	transcript	9586208	9589004	9960	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_G0000136;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=HG03521_ch_T0000364;Name=TSPY1
HG03521_chrY	CAT	exon	9586208	9586340	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000364:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9586254	9586340	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000364:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9586254	9586256	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=start_codon:HG03521_ch_T0000364;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9586341	9586601	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000364:0;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9586602	9586739	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000364:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9586602	9586739	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000364:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9586740	9587346	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000364:1;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9587347	9587424	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000364:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9587347	9587424	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000364:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9587425	9587552	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000364:2;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9587553	9587664	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000364:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9587553	9587664	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000364:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9587665	9587765	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000364:3;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9587766	9587911	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000364:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9587766	9587911	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000364:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9587912	9588017	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000364:4;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9588018	9588099	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000364:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9588018	9588099	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000364:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9588100	9588793	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=intron:HG03521_ch_T0000364:5;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9588794	9589004	.	+	.	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=exon:HG03521_ch_T0000364:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9588794	9588816	.	+	2	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=CDS:HG03521_ch_T0000364:6;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9588814	9588816	.	+	0	source_transcript=hg002_chrY_paternal_232.2;source_transcript_name=hg002_chrY_paternal_232.5;source_gene=hg002_chrY_paternal_232;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_232;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_232.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_232.2;transcript_score=299.7;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY1;alternative_source_transcripts=hg002_chrY_paternal_232.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000364;gene_id=HG03521_ch_G0000136;Parent=HG03521_ch_T0000364;transcript_name=hg002_chrY_paternal_232.5;gene_name=TSPY1;ID=stop_codon:HG03521_ch_T0000364;Name=TSPY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9598275	9603962	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_173;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;gene_id=HG03521_ch_G0000137;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000137;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9598275	9603962	1000	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03521_ch_T0000365;gene_id=HG03521_ch_G0000137;Parent=HG03521_ch_G0000137;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000365;Name=FAM197Y2
HG03521_chrY	CAT	exon	9598275	9598334	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03521_ch_T0000365;gene_id=HG03521_ch_G0000137;Parent=HG03521_ch_T0000365;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000365:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9598335	9601884	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03521_ch_T0000365;gene_id=HG03521_ch_G0000137;Parent=HG03521_ch_T0000365;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000365:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9601885	9602043	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03521_ch_T0000365;gene_id=HG03521_ch_G0000137;Parent=HG03521_ch_T0000365;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000365:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9602044	9603539	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03521_ch_T0000365;gene_id=HG03521_ch_G0000137;Parent=HG03521_ch_T0000365;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000365:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9603540	9603685	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03521_ch_T0000365;gene_id=HG03521_ch_G0000137;Parent=HG03521_ch_T0000365;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000365:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9603686	9603771	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03521_ch_T0000365;gene_id=HG03521_ch_G0000137;Parent=HG03521_ch_T0000365;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000365:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9603772	9603962	.	-	.	source_transcript=hg002_chrY_paternal_173.1;source_transcript_name=hg002_chrY_paternal_173.1;source_gene=hg002_chrY_paternal_173;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_173;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_173.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_173.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_233.1,hg002_chrY_paternal_233.1;transcript_id=HG03521_ch_T0000365;gene_id=HG03521_ch_G0000137;Parent=HG03521_ch_T0000365;transcript_name=hg002_chrY_paternal_173.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000365:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9606486	9609283	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_234;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;gene_id=HG03521_ch_G0000138;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000138;Name=TSPY10
HG03521_chrY	CAT	transcript	9606486	9609283	100	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_G0000138;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG03521_ch_T0000366;Name=TSPY10
HG03521_chrY	CAT	exon	9606486	9607017	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000366:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9606532	9607017	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000366:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9606532	9606534	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000366;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607018	9607624	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000366:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9607625	9607702	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000366:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9607625	9607702	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000366:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607703	9607830	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000366:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9607831	9607942	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000366:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9607831	9607942	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000366:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607943	9608043	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000366:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9608044	9608189	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000366:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9608044	9608189	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000366:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9608190	9608295	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000366:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9608296	9608377	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000366:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9608296	9608377	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000366:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9608378	9609071	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000366:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9609072	9609283	.	+	.	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000366:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9609072	9609094	.	+	2	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000366:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9609092	9609094	.	+	0	source_transcript=hg002_chrY_paternal_234.1;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.1,hg002_chrY_paternal_234.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000366;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000366;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000366;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9606486	9609283	100	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_G0000138;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG03521_ch_T0000367;Name=TSPY10
HG03521_chrY	CAT	exon	9606486	9607017	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000367:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9606532	9607017	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000367:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9606532	9606534	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000367;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607018	9607624	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000367:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9607625	9607702	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000367:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9607625	9607702	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000367:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607703	9607830	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000367:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9607831	9607942	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000367:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9607831	9607942	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000367:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607943	9608043	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000367:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9608044	9608189	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000367:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9608044	9608189	.	+	2	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000367:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9608190	9608284	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000367:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9608285	9608377	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000367:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9608285	9608347	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000367:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9608345	9608347	.	+	0	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000367;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9608378	9609071	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000367:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9609072	9609283	.	+	.	source_transcript=hg002_chrY_paternal_234.2;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.2,hg002_chrY_paternal_234.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000367;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000367;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000367:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9606486	9609283	100	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_G0000138;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=HG03521_ch_T0000368;Name=TSPY10
HG03521_chrY	CAT	exon	9606486	9607017	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000368:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9606532	9607017	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000368:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9606532	9606534	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000368;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607018	9607624	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000368:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9607625	9607702	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000368:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9607625	9607702	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000368:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607703	9607830	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000368:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9607831	9607942	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000368:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9607831	9607942	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000368:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607943	9608050	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000368:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9608051	9608189	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000368:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9608051	9608189	.	+	2	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000368:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9608190	9608295	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000368:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9608296	9608377	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000368:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9608296	9608347	.	+	1	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000368:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9608345	9608347	.	+	0	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000368;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9608378	9609071	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000368:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9609072	9609283	.	+	.	source_transcript=hg002_chrY_paternal_234.3;source_transcript_name=hg002_chrY_paternal_234.4;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_234.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.3,hg002_chrY_paternal_234.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000368;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000368;transcript_name=hg002_chrY_paternal_234.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000368:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9606486	9609283	1000	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_G0000138;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=HG03521_ch_T0000369;Name=TSPY10
HG03521_chrY	CAT	exon	9606486	9607017	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000369:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607018	9607624	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000369:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9607625	9607702	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000369:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607703	9607830	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000369:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9607831	9607942	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000369:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9607943	9608050	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000369:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9608051	9608189	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000369:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9608190	9608284	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000369:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9608285	9608377	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000369:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9608378	9609071	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000369:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9609072	9609283	.	+	.	source_transcript=hg002_chrY_paternal_234.4;source_transcript_name=hg002_chrY_paternal_234.1;source_gene=hg002_chrY_paternal_234;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_234;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_234.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_234.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_234.4,hg002_chrY_paternal_234.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000369;gene_id=HG03521_ch_G0000138;Parent=HG03521_ch_T0000369;transcript_name=hg002_chrY_paternal_234.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000369:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9618579	9624268	.	-	.	source_gene_common_name=FAM197Y2;source_gene=hg002_chrY_paternal_235;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;gene_id=HG03521_ch_G0000139;gene_biotype=lncRNA;gene_name=FAM197Y2;gene_sources=liftoff;ID=HG03521_ch_G0000139;Name=FAM197Y2
HG03521_chrY	CAT	transcript	9618579	9624268	1000	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03521_ch_T0000370;gene_id=HG03521_ch_G0000139;Parent=HG03521_ch_G0000139;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=HG03521_ch_T0000370;Name=FAM197Y2
HG03521_chrY	CAT	exon	9618579	9618638	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03521_ch_T0000370;gene_id=HG03521_ch_G0000139;Parent=HG03521_ch_T0000370;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000370:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9618639	9622188	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03521_ch_T0000370;gene_id=HG03521_ch_G0000139;Parent=HG03521_ch_T0000370;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000370:0;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9622189	9622347	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03521_ch_T0000370;gene_id=HG03521_ch_G0000139;Parent=HG03521_ch_T0000370;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000370:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9622348	9623845	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03521_ch_T0000370;gene_id=HG03521_ch_G0000139;Parent=HG03521_ch_T0000370;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000370:1;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9623846	9623991	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03521_ch_T0000370;gene_id=HG03521_ch_G0000139;Parent=HG03521_ch_T0000370;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000370:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9623992	9624077	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03521_ch_T0000370;gene_id=HG03521_ch_G0000139;Parent=HG03521_ch_T0000370;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=intron:HG03521_ch_T0000370:2;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9624078	9624268	.	-	.	source_transcript=hg002_chrY_paternal_235.1;source_transcript_name=hg002_chrY_paternal_235.1;source_gene=hg002_chrY_paternal_235;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_235;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_235.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_235.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y2;alternative_source_transcripts=hg002_chrY_paternal_235.1,hg002_chrY_paternal_235.1;transcript_id=HG03521_ch_T0000370;gene_id=HG03521_ch_G0000139;Parent=HG03521_ch_T0000370;transcript_name=hg002_chrY_paternal_235.1;gene_name=FAM197Y2;ID=exon:HG03521_ch_T0000370:3;Name=FAM197Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9626792	9629588	.	+	.	source_gene_common_name=TSPY10P;source_gene=hg002_chrY_paternal_236;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;gene_id=HG03521_ch_G0000140;gene_biotype=pseudogene;gene_name=TSPY10P;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000140;Name=TSPY10P
HG03521_chrY	CAT	transcript	9626792	9629588	1000	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_G0000140;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03521_ch_T0000371;Name=TSPY10P
HG03521_chrY	CAT	exon	9626792	9627323	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000371:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9626838	9627323	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000371:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9626838	9626840	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG03521_ch_T0000371;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9627324	9627930	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000371:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9627931	9628008	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000371:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9627931	9628008	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000371:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628009	9628136	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000371:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628137	9628248	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000371:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9628137	9628248	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000371:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628249	9628349	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000371:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628350	9628495	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000371:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9628350	9628384	.	+	2	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000371:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9628382	9628384	.	+	0	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG03521_ch_T0000371;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628496	9628601	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000371:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628602	9628683	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000371:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628684	9629377	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000371:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9629378	9629588	.	+	.	source_transcript=hg002_chrY_paternal_236.1;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.1,hg002_chrY_paternal_236.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000371;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000371;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000371:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9626792	9629588	1000	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_G0000140;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03521_ch_T0000372;Name=TSPY10P
HG03521_chrY	CAT	exon	9626792	9627323	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000372:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9626838	9627323	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000372:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9626838	9626840	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG03521_ch_T0000372;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9627324	9627930	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000372:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9627931	9628008	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000372:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9627931	9628008	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000372:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628009	9628136	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000372:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628137	9628248	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000372:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9628137	9628248	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000372:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628249	9628349	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000372:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628350	9628495	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000372:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9628350	9628384	.	+	2	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000372:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9628382	9628384	.	+	0	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG03521_ch_T0000372;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628496	9628590	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000372:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628591	9628683	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000372:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628684	9629377	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000372:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9629378	9629588	.	+	.	source_transcript=hg002_chrY_paternal_236.2;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.2,hg002_chrY_paternal_236.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000372;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000372;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000372:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9626792	9629588	1000	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_G0000140;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03521_ch_T0000373;Name=TSPY10P
HG03521_chrY	CAT	exon	9626792	9627323	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000373:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9626838	9627323	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000373:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9626838	9626840	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=start_codon:HG03521_ch_T0000373;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9627324	9627930	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000373:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9627931	9628008	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000373:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9627931	9628008	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000373:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628009	9628136	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000373:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628137	9628248	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000373:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9628137	9628248	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000373:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628249	9628356	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000373:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628357	9628495	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000373:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9628357	9628495	.	+	2	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000373:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628496	9628601	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000373:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628602	9628683	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000373:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9628602	9628653	.	+	1	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=CDS:HG03521_ch_T0000373:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9628651	9628653	.	+	0	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=stop_codon:HG03521_ch_T0000373;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628684	9629377	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000373:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9629378	9629588	.	+	.	source_transcript=hg002_chrY_paternal_236.3;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.3,hg002_chrY_paternal_236.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000373;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000373;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000373:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9626792	9629588	1000	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_G0000140;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=HG03521_ch_T0000374;Name=TSPY10P
HG03521_chrY	CAT	exon	9626792	9627323	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000374:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9627324	9627930	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000374:0;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9627931	9628008	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000374:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628009	9628136	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000374:1;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628137	9628248	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000374:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628249	9628356	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000374:2;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628357	9628495	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000374:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628496	9628590	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000374:3;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9628591	9628683	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000374:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9628684	9629377	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=intron:HG03521_ch_T0000374:4;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9629378	9629588	.	+	.	source_transcript=hg002_chrY_paternal_236.4;source_transcript_name=hg002_chrY_paternal_236.1;source_gene=hg002_chrY_paternal_236;source_gene_biotype=pseudogene;original_gene_id=hg002_chrY_paternal_236;gene_biotype=pseudogene;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_236.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_236.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10P;alternative_source_transcripts=hg002_chrY_paternal_236.4,hg002_chrY_paternal_236.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000374;gene_id=HG03521_ch_G0000140;Parent=HG03521_ch_T0000374;transcript_name=hg002_chrY_paternal_236.1;gene_name=TSPY10P;ID=exon:HG03521_ch_T0000374:5;Name=TSPY10P;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9638907	9644517	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_237;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;gene_id=HG03521_ch_G0000141;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03521_ch_G0000141;Name=FAM197Y3
HG03521_chrY	CAT	transcript	9638907	9644517	1000	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03521_ch_T0000375;gene_id=HG03521_ch_G0000141;Parent=HG03521_ch_G0000141;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000375;Name=FAM197Y3
HG03521_chrY	CAT	exon	9638907	9638966	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03521_ch_T0000375;gene_id=HG03521_ch_G0000141;Parent=HG03521_ch_T0000375;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000375:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9638967	9642515	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03521_ch_T0000375;gene_id=HG03521_ch_G0000141;Parent=HG03521_ch_T0000375;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000375:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9642516	9642674	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03521_ch_T0000375;gene_id=HG03521_ch_G0000141;Parent=HG03521_ch_T0000375;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000375:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9642675	9644183	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03521_ch_T0000375;gene_id=HG03521_ch_G0000141;Parent=HG03521_ch_T0000375;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000375:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9644184	9644329	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03521_ch_T0000375;gene_id=HG03521_ch_G0000141;Parent=HG03521_ch_T0000375;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000375:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9644330	9644415	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03521_ch_T0000375;gene_id=HG03521_ch_G0000141;Parent=HG03521_ch_T0000375;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000375:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9644416	9644517	.	-	.	source_transcript=hg002_chrY_paternal_237.1;source_transcript_name=hg002_chrY_paternal_237.1;source_gene=hg002_chrY_paternal_237;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_237;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_237.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_237.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_237.1,hg002_chrY_paternal_237.1;transcript_id=HG03521_ch_T0000375;gene_id=HG03521_ch_G0000141;Parent=HG03521_ch_T0000375;transcript_name=hg002_chrY_paternal_237.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000375:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9647127	9649923	.	+	.	source_gene_common_name=TSPY10;source_gene=hg002_chrY_paternal_238;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;gene_id=HG03521_ch_G0000142;gene_biotype=protein_coding;gene_name=TSPY10;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000142;Name=TSPY10
HG03521_chrY	CAT	transcript	9647127	9649923	100	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_G0000142;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG03521_ch_T0000376;Name=TSPY10
HG03521_chrY	CAT	exon	9647127	9647658	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000376:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9647173	9647658	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000376:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9647173	9647175	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000376;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9647659	9648265	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000376:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648266	9648343	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000376:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648266	9648343	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000376:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648344	9648471	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000376:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648472	9648583	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000376:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648472	9648583	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000376:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648584	9648684	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000376:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648685	9648830	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000376:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648685	9648830	.	+	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000376:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648831	9648936	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000376:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648937	9649018	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000376:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648937	9649018	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000376:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9649019	9649712	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000376:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9649713	9649923	.	+	.	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000376:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9649713	9649735	.	+	2	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000376:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9649733	9649735	.	+	0	source_transcript=hg002_chrY_paternal_238.1;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.1,hg002_chrY_paternal_238.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000376;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000376;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000376;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9647127	9649923	100	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_G0000142;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG03521_ch_T0000377;Name=TSPY10
HG03521_chrY	CAT	exon	9647127	9647658	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000377:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9647173	9647658	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000377:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9647173	9647175	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000377;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9647659	9648265	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000377:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648266	9648343	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000377:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648266	9648343	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000377:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648344	9648471	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000377:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648472	9648583	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000377:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648472	9648583	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000377:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648584	9648684	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000377:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648685	9648830	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000377:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648685	9648830	.	+	2	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000377:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648831	9648925	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000377:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648926	9649018	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000377:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648926	9648988	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000377:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9648986	9648988	.	+	0	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000377;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9649019	9649712	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000377:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9649713	9649923	.	+	.	source_transcript=hg002_chrY_paternal_238.2;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.2,hg002_chrY_paternal_238.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000377;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000377;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000377:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9647127	9649923	100	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_G0000142;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=HG03521_ch_T0000378;Name=TSPY10
HG03521_chrY	CAT	exon	9647127	9647658	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000378:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9647173	9647658	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000378:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9647173	9647175	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=start_codon:HG03521_ch_T0000378;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9647659	9648265	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000378:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648266	9648343	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000378:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648266	9648343	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000378:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648344	9648471	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000378:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648472	9648583	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000378:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648472	9648583	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000378:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648584	9648691	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000378:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648692	9648830	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000378:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648692	9648830	.	+	2	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000378:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648831	9648936	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000378:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648937	9649018	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000378:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9648937	9648988	.	+	1	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=CDS:HG03521_ch_T0000378:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9648986	9648988	.	+	0	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=stop_codon:HG03521_ch_T0000378;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9649019	9649712	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=intron:HG03521_ch_T0000378:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9649713	9649923	.	+	.	source_transcript=hg002_chrY_paternal_238.3;source_transcript_name=hg002_chrY_paternal_238.4;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_238.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.3,hg002_chrY_paternal_238.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000378;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000378;transcript_name=hg002_chrY_paternal_238.4;gene_name=TSPY10;ID=exon:HG03521_ch_T0000378:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9647127	9649923	1000	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_G0000142;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=HG03521_ch_T0000379;Name=TSPY10
HG03521_chrY	CAT	exon	9647127	9647658	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000379:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9647659	9648265	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000379:0;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648266	9648343	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000379:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648344	9648471	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000379:1;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648472	9648583	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000379:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648584	9648691	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000379:2;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648692	9648830	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000379:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9648831	9648925	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000379:3;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9648926	9649018	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000379:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9649019	9649712	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=intron:HG03521_ch_T0000379:4;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9649713	9649923	.	+	.	source_transcript=hg002_chrY_paternal_238.4;source_transcript_name=hg002_chrY_paternal_238.1;source_gene=hg002_chrY_paternal_238;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_238;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_238.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_238.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY10;alternative_source_transcripts=hg002_chrY_paternal_238.4,hg002_chrY_paternal_238.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000379;gene_id=HG03521_ch_G0000142;Parent=HG03521_ch_T0000379;transcript_name=hg002_chrY_paternal_238.1;gene_name=TSPY10;ID=exon:HG03521_ch_T0000379:5;Name=TSPY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9659235	9664822	.	-	.	source_gene_common_name=FAM197Y3;source_gene=hg002_chrY_paternal_239;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;gene_id=HG03521_ch_G0000143;gene_biotype=lncRNA;gene_name=FAM197Y3;gene_sources=liftoff;ID=HG03521_ch_G0000143;Name=FAM197Y3
HG03521_chrY	CAT	transcript	9659235	9664822	1000	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03521_ch_T0000380;gene_id=HG03521_ch_G0000143;Parent=HG03521_ch_G0000143;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=HG03521_ch_T0000380;Name=FAM197Y3
HG03521_chrY	CAT	exon	9659235	9659294	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03521_ch_T0000380;gene_id=HG03521_ch_G0000143;Parent=HG03521_ch_T0000380;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000380:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9659295	9662840	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03521_ch_T0000380;gene_id=HG03521_ch_G0000143;Parent=HG03521_ch_T0000380;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000380:0;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9662841	9662999	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03521_ch_T0000380;gene_id=HG03521_ch_G0000143;Parent=HG03521_ch_T0000380;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000380:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9663000	9664488	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03521_ch_T0000380;gene_id=HG03521_ch_G0000143;Parent=HG03521_ch_T0000380;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000380:1;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9664489	9664634	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03521_ch_T0000380;gene_id=HG03521_ch_G0000143;Parent=HG03521_ch_T0000380;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000380:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9664635	9664720	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03521_ch_T0000380;gene_id=HG03521_ch_G0000143;Parent=HG03521_ch_T0000380;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=intron:HG03521_ch_T0000380:2;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9664721	9664822	.	-	.	source_transcript=hg002_chrY_paternal_239.1;source_transcript_name=hg002_chrY_paternal_239.1;source_gene=hg002_chrY_paternal_239;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_239;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_239.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_239.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y3;alternative_source_transcripts=hg002_chrY_paternal_239.1,hg002_chrY_paternal_239.1;transcript_id=HG03521_ch_T0000380;gene_id=HG03521_ch_G0000143;Parent=HG03521_ch_T0000380;transcript_name=hg002_chrY_paternal_239.1;gene_name=FAM197Y3;ID=exon:HG03521_ch_T0000380:3;Name=FAM197Y3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9667435	9670247	.	+	.	source_gene_common_name=TSPY9;source_gene=hg002_chrY_paternal_240;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;gene_id=HG03521_ch_G0000144;gene_biotype=protein_coding;gene_name=TSPY9;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000144;Name=TSPY9
HG03521_chrY	CAT	transcript	9667435	9670247	100	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_G0000144;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=HG03521_ch_T0000381;Name=TSPY9
HG03521_chrY	CAT	exon	9667435	9667984	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000381:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9667481	9667984	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000381:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9667481	9667483	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:HG03521_ch_T0000381;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9667985	9668591	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000381:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9668592	9668669	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000381:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9668592	9668669	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000381:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9668670	9668797	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000381:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9668798	9668909	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000381:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9668798	9668909	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000381:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9668910	9669010	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000381:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9669011	9669156	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000381:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9669011	9669156	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000381:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9669157	9669262	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000381:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9669263	9669344	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000381:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9669263	9669344	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000381:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9669345	9670036	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000381:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9670037	9670247	.	+	.	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000381:5;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9670037	9670059	.	+	2	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000381:5;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9670057	9670059	.	+	0	source_transcript=hg002_chrY_paternal_240.1;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.1,hg002_chrY_paternal_240.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000381;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000381;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:HG03521_ch_T0000381;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	9667435	9670247	100	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_G0000144;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=HG03521_ch_T0000382;Name=TSPY9
HG03521_chrY	CAT	exon	9667435	9667984	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000382:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9667481	9667984	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000382:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	9667481	9667483	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=start_codon:HG03521_ch_T0000382;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9667985	9668591	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000382:0;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9668592	9668669	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000382:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9668592	9668669	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000382:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9668670	9668797	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000382:1;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9668798	9668909	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000382:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9668798	9668909	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000382:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9668910	9669010	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000382:2;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9669011	9669156	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000382:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9669011	9669156	.	+	2	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000382:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9669157	9669251	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000382:3;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9669252	9669344	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000382:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	9669252	9669314	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=CDS:HG03521_ch_T0000382:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	9669312	9669314	.	+	0	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=stop_codon:HG03521_ch_T0000382;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9669345	9670036	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=intron:HG03521_ch_T0000382:4;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9670037	9670247	.	+	.	source_transcript=hg002_chrY_paternal_240.2;source_transcript_name=hg002_chrY_paternal_240.2;source_gene=hg002_chrY_paternal_240;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_240;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_240.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_240.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY9;alternative_source_transcripts=hg002_chrY_paternal_240.2,hg002_chrY_paternal_240.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000382;gene_id=HG03521_ch_G0000144;Parent=HG03521_ch_T0000382;transcript_name=hg002_chrY_paternal_240.2;gene_name=TSPY9;ID=exon:HG03521_ch_T0000382:5;Name=TSPY9;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9750304	9754736	.	-	.	source_gene_common_name=RBMY3AP;source_gene=hg002_chrY_paternal_242;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;gene_id=HG03521_ch_G0000145;gene_biotype=transcribed_pseudogene;gene_name=RBMY3AP;gene_sources=liftoff;ID=HG03521_ch_G0000145;Name=RBMY3AP
HG03521_chrY	CAT	transcript	9750304	9754736	1000	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03521_ch_T0000383;gene_id=HG03521_ch_G0000145;Parent=HG03521_ch_G0000145;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=HG03521_ch_T0000383;Name=RBMY3AP
HG03521_chrY	CAT	exon	9750304	9750454	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03521_ch_T0000383;gene_id=HG03521_ch_G0000145;Parent=HG03521_ch_T0000383;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG03521_ch_T0000383:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9750455	9754364	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03521_ch_T0000383;gene_id=HG03521_ch_G0000145;Parent=HG03521_ch_T0000383;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG03521_ch_T0000383:0;Name=RBMY3AP;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9754365	9754466	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03521_ch_T0000383;gene_id=HG03521_ch_G0000145;Parent=HG03521_ch_T0000383;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG03521_ch_T0000383:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9754467	9754672	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03521_ch_T0000383;gene_id=HG03521_ch_G0000145;Parent=HG03521_ch_T0000383;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=intron:HG03521_ch_T0000383:1;Name=RBMY3AP;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9754673	9754736	.	-	.	source_transcript=hg002_chrY_paternal_242.1;source_transcript_name=hg002_chrY_paternal_242.1;source_gene=hg002_chrY_paternal_242;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_242;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_242.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_242.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY3AP;alternative_source_transcripts=hg002_chrY_paternal_242.1,hg002_chrY_paternal_242.1;transcript_id=HG03521_ch_T0000383;gene_id=HG03521_ch_G0000145;Parent=HG03521_ch_T0000383;transcript_name=hg002_chrY_paternal_242.1;gene_name=RBMY3AP;ID=exon:HG03521_ch_T0000383:2;Name=RBMY3AP;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9830690	9833289	.	+	.	source_gene_common_name=TTTY8;source_gene=hg002_chrY_paternal_245;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;gene_id=HG03521_ch_G0000146;gene_biotype=lncRNA;gene_name=TTTY8;gene_sources=liftoff;ID=HG03521_ch_G0000146;Name=TTTY8
HG03521_chrY	CAT	transcript	9830690	9833289	1000	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03521_ch_T0000384;gene_id=HG03521_ch_G0000146;Parent=HG03521_ch_G0000146;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=HG03521_ch_T0000384;Name=TTTY8
HG03521_chrY	CAT	exon	9830690	9830825	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03521_ch_T0000384;gene_id=HG03521_ch_G0000146;Parent=HG03521_ch_T0000384;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG03521_ch_T0000384:0;Name=TTTY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9830826	9831302	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03521_ch_T0000384;gene_id=HG03521_ch_G0000146;Parent=HG03521_ch_T0000384;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG03521_ch_T0000384:0;Name=TTTY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9831303	9831507	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03521_ch_T0000384;gene_id=HG03521_ch_G0000146;Parent=HG03521_ch_T0000384;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG03521_ch_T0000384:1;Name=TTTY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9831508	9833099	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03521_ch_T0000384;gene_id=HG03521_ch_G0000146;Parent=HG03521_ch_T0000384;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=intron:HG03521_ch_T0000384:1;Name=TTTY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9833100	9833289	.	+	.	source_transcript=hg002_chrY_paternal_245.1;source_transcript_name=hg002_chrY_paternal_245.1;source_gene=hg002_chrY_paternal_245;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_245;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_245.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_245.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY8;alternative_source_transcripts=hg002_chrY_paternal_245.1,hg002_chrY_paternal_245.1;transcript_id=HG03521_ch_T0000384;gene_id=HG03521_ch_G0000146;Parent=HG03521_ch_T0000384;transcript_name=hg002_chrY_paternal_245.1;gene_name=TTTY8;ID=exon:HG03521_ch_T0000384:2;Name=TTTY8;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9846414	9854852	.	-	.	source_gene_common_name=TTTY7B;source_gene=hg002_chrY_paternal_246;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;gene_id=HG03521_ch_G0000147;gene_biotype=lncRNA;gene_name=TTTY7B;gene_sources=liftoff;ID=HG03521_ch_G0000147;Name=TTTY7B
HG03521_chrY	CAT	transcript	9846414	9854852	1000	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_G0000147;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=HG03521_ch_T0000385;Name=TTTY7B
HG03521_chrY	CAT	exon	9846414	9846659	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03521_ch_T0000385:0;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9846660	9848134	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03521_ch_T0000385:0;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9848135	9848248	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03521_ch_T0000385:1;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9848249	9850165	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03521_ch_T0000385:1;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9850166	9850642	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03521_ch_T0000385:2;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9850643	9851330	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03521_ch_T0000385:2;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9851331	9851405	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03521_ch_T0000385:3;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9851406	9853712	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03521_ch_T0000385:3;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9853713	9853874	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03521_ch_T0000385:4;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9853875	9854815	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=intron:HG03521_ch_T0000385:4;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9854816	9854852	.	-	.	source_transcript=hg002_chrY_paternal_246.1;source_transcript_name=hg002_chrY_paternal_246.1;source_gene=hg002_chrY_paternal_246;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_246;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_246.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_246.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY7B;alternative_source_transcripts=hg002_chrY_paternal_246.1,hg002_chrY_paternal_246.1;transcript_id=HG03521_ch_T0000385;gene_id=HG03521_ch_G0000147;Parent=HG03521_ch_T0000385;transcript_name=hg002_chrY_paternal_246.1;gene_name=TTTY7B;ID=exon:HG03521_ch_T0000385:5;Name=TTTY7B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9857243	9860886	.	-	.	source_gene_common_name=TTTY21;source_gene=hg002_chrY_paternal_247;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;gene_id=HG03521_ch_G0000148;gene_biotype=lncRNA;gene_name=TTTY21;gene_sources=liftoff;ID=HG03521_ch_G0000148;Name=TTTY21
HG03521_chrY	CAT	transcript	9857243	9860886	1000	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03521_ch_T0000386;gene_id=HG03521_ch_G0000148;Parent=HG03521_ch_G0000148;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=HG03521_ch_T0000386;Name=TTTY21
HG03521_chrY	CAT	exon	9857243	9857347	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03521_ch_T0000386;gene_id=HG03521_ch_G0000148;Parent=HG03521_ch_T0000386;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG03521_ch_T0000386:0;Name=TTTY21;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9857348	9860684	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03521_ch_T0000386;gene_id=HG03521_ch_G0000148;Parent=HG03521_ch_T0000386;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=intron:HG03521_ch_T0000386:0;Name=TTTY21;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9860685	9860886	.	-	.	source_transcript=hg002_chrY_paternal_247.1;source_transcript_name=hg002_chrY_paternal_247.1;source_gene=hg002_chrY_paternal_247;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_247;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_247.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_247.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY21;alternative_source_transcripts=hg002_chrY_paternal_247.1,hg002_chrY_paternal_247.1;transcript_id=HG03521_ch_T0000386;gene_id=HG03521_ch_G0000148;Parent=HG03521_ch_T0000386;transcript_name=hg002_chrY_paternal_247.1;gene_name=TTTY21;ID=exon:HG03521_ch_T0000386:1;Name=TTTY21;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9875876	9898076	.	+	.	source_gene_common_name=TTTY2;source_gene=hg002_chrY_paternal_248;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;gene_id=HG03521_ch_G0000149;gene_biotype=lncRNA;gene_name=TTTY2;gene_sources=liftoff;ID=HG03521_ch_G0000149;Name=TTTY2
HG03521_chrY	CAT	transcript	9875876	9898076	1000	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_G0000149;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=HG03521_ch_T0000387;Name=TTTY2
HG03521_chrY	CAT	exon	9875876	9876080	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03521_ch_T0000387:0;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9876081	9881913	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03521_ch_T0000387:0;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9881914	9881991	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03521_ch_T0000387:1;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9881992	9884467	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03521_ch_T0000387:1;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9884468	9884554	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03521_ch_T0000387:2;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9884555	9891948	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03521_ch_T0000387:2;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9891949	9892097	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03521_ch_T0000387:3;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9892098	9892789	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03521_ch_T0000387:3;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9892790	9892946	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03521_ch_T0000387:4;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9892947	9895776	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03521_ch_T0000387:4;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9895777	9895855	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03521_ch_T0000387:5;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9895856	9895975	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03521_ch_T0000387:5;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9895976	9896173	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03521_ch_T0000387:6;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9896174	9897396	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=intron:HG03521_ch_T0000387:6;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9897397	9898076	.	+	.	source_transcript=hg002_chrY_paternal_248.1;source_transcript_name=hg002_chrY_paternal_248.1;source_gene=hg002_chrY_paternal_248;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_248;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_248.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_248.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY2;alternative_source_transcripts=hg002_chrY_paternal_248.1,hg002_chrY_paternal_248.1;transcript_id=HG03521_ch_T0000387;gene_id=HG03521_ch_G0000149;Parent=HG03521_ch_T0000387;transcript_name=hg002_chrY_paternal_248.1;gene_name=TTTY2;ID=exon:HG03521_ch_T0000387:7;Name=TTTY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9892756	9913919	.	-	.	source_gene_common_name=TTTY1B;source_gene=hg002_chrY_paternal_249;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;gene_id=HG03521_ch_G0000150;gene_biotype=lncRNA;gene_name=TTTY1B;gene_sources=liftoff;ID=HG03521_ch_G0000150;Name=TTTY1B
HG03521_chrY	CAT	transcript	9892756	9913919	1000	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03521_ch_T0000388;gene_id=HG03521_ch_G0000150;Parent=HG03521_ch_G0000150;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=HG03521_ch_T0000388;Name=TTTY1B
HG03521_chrY	CAT	exon	9892756	9893013	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03521_ch_T0000388;gene_id=HG03521_ch_G0000150;Parent=HG03521_ch_T0000388;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03521_ch_T0000388:0;Name=TTTY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9893014	9900594	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03521_ch_T0000388;gene_id=HG03521_ch_G0000150;Parent=HG03521_ch_T0000388;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03521_ch_T0000388:0;Name=TTTY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9900595	9900732	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03521_ch_T0000388;gene_id=HG03521_ch_G0000150;Parent=HG03521_ch_T0000388;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03521_ch_T0000388:1;Name=TTTY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9900733	9903088	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03521_ch_T0000388;gene_id=HG03521_ch_G0000150;Parent=HG03521_ch_T0000388;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03521_ch_T0000388:1;Name=TTTY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9903089	9903197	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03521_ch_T0000388;gene_id=HG03521_ch_G0000150;Parent=HG03521_ch_T0000388;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03521_ch_T0000388:2;Name=TTTY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9903198	9910060	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03521_ch_T0000388;gene_id=HG03521_ch_G0000150;Parent=HG03521_ch_T0000388;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03521_ch_T0000388:2;Name=TTTY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9910061	9910220	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03521_ch_T0000388;gene_id=HG03521_ch_G0000150;Parent=HG03521_ch_T0000388;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03521_ch_T0000388:3;Name=TTTY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9910221	9913644	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03521_ch_T0000388;gene_id=HG03521_ch_G0000150;Parent=HG03521_ch_T0000388;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=intron:HG03521_ch_T0000388:3;Name=TTTY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9913645	9913919	.	-	.	source_transcript=hg002_chrY_paternal_249.1;source_transcript_name=hg002_chrY_paternal_249.1;source_gene=hg002_chrY_paternal_249;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_249;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_249.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_249.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY1B;alternative_source_transcripts=hg002_chrY_paternal_249.1,hg002_chrY_paternal_249.1;transcript_id=HG03521_ch_T0000388;gene_id=HG03521_ch_G0000150;Parent=HG03521_ch_T0000388;transcript_name=hg002_chrY_paternal_249.1;gene_name=TTTY1B;ID=exon:HG03521_ch_T0000388:4;Name=TTTY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9934400	9937811	.	+	.	source_gene_common_name=LOC107987353;source_gene=hg002_chrY_paternal_250;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;gene_id=HG03521_ch_G0000151;gene_biotype=lncRNA;gene_name=LOC107987353;gene_sources=liftoff;ID=HG03521_ch_G0000151;Name=LOC107987353
HG03521_chrY	CAT	transcript	9934400	9937811	1000	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03521_ch_T0000389;gene_id=HG03521_ch_G0000151;Parent=HG03521_ch_G0000151;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=HG03521_ch_T0000389;Name=LOC107987353
HG03521_chrY	CAT	exon	9934400	9934568	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03521_ch_T0000389;gene_id=HG03521_ch_G0000151;Parent=HG03521_ch_T0000389;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG03521_ch_T0000389:0;Name=LOC107987353;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9934569	9934944	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03521_ch_T0000389;gene_id=HG03521_ch_G0000151;Parent=HG03521_ch_T0000389;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG03521_ch_T0000389:0;Name=LOC107987353;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9934945	9935017	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03521_ch_T0000389;gene_id=HG03521_ch_G0000151;Parent=HG03521_ch_T0000389;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG03521_ch_T0000389:1;Name=LOC107987353;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9935018	9937548	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03521_ch_T0000389;gene_id=HG03521_ch_G0000151;Parent=HG03521_ch_T0000389;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=intron:HG03521_ch_T0000389:1;Name=LOC107987353;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9937549	9937811	.	+	.	source_transcript=hg002_chrY_paternal_250.1;source_transcript_name=hg002_chrY_paternal_250.1;source_gene=hg002_chrY_paternal_250;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_250;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_250.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_250.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987353;alternative_source_transcripts=hg002_chrY_paternal_250.1,hg002_chrY_paternal_250.1;transcript_id=HG03521_ch_T0000389;gene_id=HG03521_ch_G0000151;Parent=HG03521_ch_T0000389;transcript_name=hg002_chrY_paternal_250.1;gene_name=LOC107987353;ID=exon:HG03521_ch_T0000389:2;Name=LOC107987353;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	9942907	9947121	.	+	.	source_gene_common_name=LINC00280;source_gene=hg002_chrY_paternal_251;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;gene_id=HG03521_ch_G0000152;gene_biotype=lncRNA;gene_name=LINC00280;gene_sources=liftoff;ID=HG03521_ch_G0000152;Name=LINC00280
HG03521_chrY	CAT	transcript	9942907	9947121	1000	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03521_ch_T0000390;gene_id=HG03521_ch_G0000152;Parent=HG03521_ch_G0000152;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=HG03521_ch_T0000390;Name=LINC00280
HG03521_chrY	CAT	exon	9942907	9942992	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03521_ch_T0000390;gene_id=HG03521_ch_G0000152;Parent=HG03521_ch_T0000390;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG03521_ch_T0000390:0;Name=LINC00280;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9942993	9945493	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03521_ch_T0000390;gene_id=HG03521_ch_G0000152;Parent=HG03521_ch_T0000390;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG03521_ch_T0000390:0;Name=LINC00280;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9945494	9945636	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03521_ch_T0000390;gene_id=HG03521_ch_G0000152;Parent=HG03521_ch_T0000390;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG03521_ch_T0000390:1;Name=LINC00280;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	9945637	9946902	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03521_ch_T0000390;gene_id=HG03521_ch_G0000152;Parent=HG03521_ch_T0000390;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=intron:HG03521_ch_T0000390:1;Name=LINC00280;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	9946903	9947121	.	+	.	source_transcript=hg002_chrY_paternal_251.1;source_transcript_name=hg002_chrY_paternal_251.1;source_gene=hg002_chrY_paternal_251;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_251;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_251.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_251.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LINC00280;alternative_source_transcripts=hg002_chrY_paternal_251.1,hg002_chrY_paternal_251.1;transcript_id=HG03521_ch_T0000390;gene_id=HG03521_ch_G0000152;Parent=HG03521_ch_T0000390;transcript_name=hg002_chrY_paternal_251.1;gene_name=LINC00280;ID=exon:HG03521_ch_T0000390:2;Name=LINC00280;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	10040444	10046049	.	+	.	source_gene_common_name=FAM197Y9;source_gene=hg002_chrY_paternal_255;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;gene_id=HG03521_ch_G0000153;gene_biotype=lncRNA;gene_name=FAM197Y9;gene_sources=liftoff;ID=HG03521_ch_G0000153;Name=FAM197Y9
HG03521_chrY	CAT	transcript	10040444	10046049	1000	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03521_ch_T0000391;gene_id=HG03521_ch_G0000153;Parent=HG03521_ch_G0000153;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=HG03521_ch_T0000391;Name=FAM197Y9
HG03521_chrY	CAT	exon	10040444	10040545	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03521_ch_T0000391;gene_id=HG03521_ch_G0000153;Parent=HG03521_ch_T0000391;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03521_ch_T0000391:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10040546	10040631	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03521_ch_T0000391;gene_id=HG03521_ch_G0000153;Parent=HG03521_ch_T0000391;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG03521_ch_T0000391:0;Name=FAM197Y9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10040632	10040777	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03521_ch_T0000391;gene_id=HG03521_ch_G0000153;Parent=HG03521_ch_T0000391;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03521_ch_T0000391:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10040778	10042279	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03521_ch_T0000391;gene_id=HG03521_ch_G0000153;Parent=HG03521_ch_T0000391;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG03521_ch_T0000391:1;Name=FAM197Y9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10042280	10042438	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03521_ch_T0000391;gene_id=HG03521_ch_G0000153;Parent=HG03521_ch_T0000391;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03521_ch_T0000391:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10042439	10045989	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03521_ch_T0000391;gene_id=HG03521_ch_G0000153;Parent=HG03521_ch_T0000391;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=intron:HG03521_ch_T0000391:2;Name=FAM197Y9;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10045990	10046049	.	+	.	source_transcript=hg002_chrY_paternal_255.1;source_transcript_name=hg002_chrY_paternal_255.1;source_gene=hg002_chrY_paternal_255;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_255;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_255.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_255.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM197Y9;alternative_source_transcripts=hg002_chrY_paternal_255.1,hg002_chrY_paternal_255.1;transcript_id=HG03521_ch_T0000391;gene_id=HG03521_ch_G0000153;Parent=HG03521_ch_T0000391;transcript_name=hg002_chrY_paternal_255.1;gene_name=FAM197Y9;ID=exon:HG03521_ch_T0000391:3;Name=FAM197Y9;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	10055368	10058163	.	-	.	source_gene_common_name=TSPY2;source_gene=hg002_chrY_paternal_256;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;gene_id=HG03521_ch_G0000154;gene_biotype=protein_coding;gene_name=TSPY2;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000154;Name=TSPY2
HG03521_chrY	CAT	transcript	10055368	10058163	100	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_G0000154;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG03521_ch_T0000392;Name=TSPY2
HG03521_chrY	CAT	exon	10055368	10055583	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000392:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10055561	10055583	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000392:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	10055561	10055563	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG03521_ch_T0000392;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10055584	10056277	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000392:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056278	10056359	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000392:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056278	10056359	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000392:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056360	10056465	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000392:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056466	10056611	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000392:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056466	10056611	.	-	2	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000392:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056612	10056712	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000392:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056713	10056824	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000392:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056713	10056824	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000392:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056825	10056952	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000392:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056953	10057030	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000392:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056953	10057030	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000392:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10057031	10057631	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000392:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10057632	10058163	.	-	.	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000392:5;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10057632	10058117	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000392:5;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	10058115	10058117	.	-	0	source_transcript=hg002_chrY_paternal_256.1;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.1,hg002_chrY_paternal_256.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000392;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000392;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG03521_ch_T0000392;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	10055368	10058163	100	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_G0000154;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG03521_ch_T0000393;Name=TSPY2
HG03521_chrY	CAT	exon	10055368	10055583	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000393:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10055584	10056277	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000393:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056278	10056370	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000393:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056308	10056370	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000393:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	10056308	10056310	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG03521_ch_T0000393;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056371	10056465	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000393:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056466	10056611	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000393:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056466	10056611	.	-	2	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000393:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056612	10056712	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000393:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056713	10056824	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000393:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056713	10056824	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000393:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056825	10056952	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000393:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056953	10057030	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000393:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056953	10057030	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000393:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10057031	10057631	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000393:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10057632	10058163	.	-	.	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000393:5;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10057632	10058117	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000393:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	10058115	10058117	.	-	0	source_transcript=hg002_chrY_paternal_256.2;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.2,hg002_chrY_paternal_256.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000393;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000393;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG03521_ch_T0000393;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	10055368	10058163	100	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_G0000154;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=HG03521_ch_T0000394;Name=TSPY2
HG03521_chrY	CAT	exon	10055368	10055583	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000394:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10055584	10056277	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000394:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056278	10056359	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000394:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056308	10056359	.	-	1	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000394:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	10056308	10056310	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=stop_codon:HG03521_ch_T0000394;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056360	10056465	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000394:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056466	10056604	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000394:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056466	10056604	.	-	2	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000394:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056605	10056712	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000394:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056713	10056824	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000394:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056713	10056824	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000394:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056825	10056952	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000394:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056953	10057030	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000394:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10056953	10057030	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000394:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10057031	10057631	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=intron:HG03521_ch_T0000394:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10057632	10058163	.	-	.	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=exon:HG03521_ch_T0000394:5;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	10057632	10058117	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=CDS:HG03521_ch_T0000394:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	10058115	10058117	.	-	0	source_transcript=hg002_chrY_paternal_256.3;source_transcript_name=hg002_chrY_paternal_256.4;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_256.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.3,hg002_chrY_paternal_256.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000394;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000394;transcript_name=hg002_chrY_paternal_256.4;gene_name=TSPY2;ID=start_codon:HG03521_ch_T0000394;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	10055368	10058163	1000	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_G0000154;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=HG03521_ch_T0000395;Name=TSPY2
HG03521_chrY	CAT	exon	10055368	10055583	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03521_ch_T0000395:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10055584	10056277	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03521_ch_T0000395:0;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056278	10056370	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03521_ch_T0000395:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056371	10056465	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03521_ch_T0000395:1;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056466	10056604	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03521_ch_T0000395:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056605	10056712	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03521_ch_T0000395:2;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056713	10056824	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03521_ch_T0000395:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10056825	10056952	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03521_ch_T0000395:3;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10056953	10057030	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03521_ch_T0000395:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10057031	10057631	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=intron:HG03521_ch_T0000395:4;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10057632	10058163	.	-	.	source_transcript=hg002_chrY_paternal_256.4;source_transcript_name=hg002_chrY_paternal_256.1;source_gene=hg002_chrY_paternal_256;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_256;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_256.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_256.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TSPY2;alternative_source_transcripts=hg002_chrY_paternal_256.4,hg002_chrY_paternal_256.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000395;gene_id=HG03521_ch_G0000154;Parent=HG03521_ch_T0000395;transcript_name=hg002_chrY_paternal_256.1;gene_name=TSPY2;ID=exon:HG03521_ch_T0000395:5;Name=TSPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	10060776	10061940	.	+	.	source_gene_common_name=TTTY23B;source_gene=hg002_chrY_paternal_257;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;gene_id=HG03521_ch_G0000155;gene_biotype=lncRNA;gene_name=TTTY23B;gene_sources=liftoff;ID=HG03521_ch_G0000155;Name=TTTY23B
HG03521_chrY	CAT	transcript	10060776	10061940	1000	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03521_ch_T0000396;gene_id=HG03521_ch_G0000155;Parent=HG03521_ch_G0000155;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=HG03521_ch_T0000396;Name=TTTY23B
HG03521_chrY	CAT	exon	10060776	10060832	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03521_ch_T0000396;gene_id=HG03521_ch_G0000155;Parent=HG03521_ch_T0000396;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG03521_ch_T0000396:0;Name=TTTY23B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10060833	10060945	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03521_ch_T0000396;gene_id=HG03521_ch_G0000155;Parent=HG03521_ch_T0000396;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG03521_ch_T0000396:0;Name=TTTY23B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10060946	10061091	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03521_ch_T0000396;gene_id=HG03521_ch_G0000155;Parent=HG03521_ch_T0000396;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG03521_ch_T0000396:1;Name=TTTY23B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	10061092	10061631	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03521_ch_T0000396;gene_id=HG03521_ch_G0000155;Parent=HG03521_ch_T0000396;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=intron:HG03521_ch_T0000396:1;Name=TTTY23B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	10061632	10061940	.	+	.	source_transcript=hg002_chrY_paternal_257.1;source_transcript_name=hg002_chrY_paternal_257.1;source_gene=hg002_chrY_paternal_257;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_257;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_257.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_257.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY23B;alternative_source_transcripts=hg002_chrY_paternal_257.1,hg002_chrY_paternal_257.1;transcript_id=HG03521_ch_T0000396;gene_id=HG03521_ch_G0000155;Parent=HG03521_ch_T0000396;transcript_name=hg002_chrY_paternal_257.1;gene_name=TTTY23B;ID=exon:HG03521_ch_T0000396:2;Name=TTTY23B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	12290313	12293327	.	-	.	source_gene_common_name=LOC124904996;source_gene=hg002_chrY_paternal_275;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;gene_id=HG03521_ch_G0000156;gene_biotype=lncRNA;gene_name=LOC124904996;gene_sources=liftoff;ID=HG03521_ch_G0000156;Name=LOC124904996
HG03521_chrY	CAT	transcript	12290313	12293327	1000	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03521_ch_T0000397;gene_id=HG03521_ch_G0000156;Parent=HG03521_ch_G0000156;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=HG03521_ch_T0000397;Name=LOC124904996
HG03521_chrY	CAT	exon	12290313	12291578	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03521_ch_T0000397;gene_id=HG03521_ch_G0000156;Parent=HG03521_ch_T0000397;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG03521_ch_T0000397:0;Name=LOC124904996;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	12291579	12292905	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03521_ch_T0000397;gene_id=HG03521_ch_G0000156;Parent=HG03521_ch_T0000397;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=intron:HG03521_ch_T0000397:0;Name=LOC124904996;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	12292906	12293327	.	-	.	source_transcript=hg002_chrY_paternal_275.1;source_transcript_name=hg002_chrY_paternal_275.1;source_gene=hg002_chrY_paternal_275;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_275;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_275.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_275.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124904996;alternative_source_transcripts=hg002_chrY_paternal_275.1,hg002_chrY_paternal_275.1;transcript_id=HG03521_ch_T0000397;gene_id=HG03521_ch_G0000156;Parent=HG03521_ch_T0000397;transcript_name=hg002_chrY_paternal_275.1;gene_name=LOC124904996;ID=exon:HG03521_ch_T0000397:1;Name=LOC124904996;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	12375840	12384196	.	-	.	source_gene_common_name=LOC105379273;source_gene=hg002_chrY_paternal_284;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;gene_id=HG03521_ch_G0000157;gene_biotype=lncRNA;gene_name=LOC105379273;gene_sources=liftoff;ID=HG03521_ch_G0000157;Name=LOC105379273
HG03521_chrY	CAT	transcript	12375840	12384196	1000	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03521_ch_T0000398;gene_id=HG03521_ch_G0000157;Parent=HG03521_ch_G0000157;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=HG03521_ch_T0000398;Name=LOC105379273
HG03521_chrY	CAT	exon	12375840	12375881	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03521_ch_T0000398;gene_id=HG03521_ch_G0000157;Parent=HG03521_ch_T0000398;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG03521_ch_T0000398:0;Name=LOC105379273;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	12375882	12381942	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03521_ch_T0000398;gene_id=HG03521_ch_G0000157;Parent=HG03521_ch_T0000398;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG03521_ch_T0000398:0;Name=LOC105379273;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	12381943	12382001	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03521_ch_T0000398;gene_id=HG03521_ch_G0000157;Parent=HG03521_ch_T0000398;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG03521_ch_T0000398:1;Name=LOC105379273;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	12382002	12384136	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03521_ch_T0000398;gene_id=HG03521_ch_G0000157;Parent=HG03521_ch_T0000398;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=intron:HG03521_ch_T0000398:1;Name=LOC105379273;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	12384137	12384196	.	-	.	source_transcript=hg002_chrY_paternal_284.1;source_transcript_name=hg002_chrY_paternal_284.1;source_gene=hg002_chrY_paternal_284;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_284;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_284.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_284.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379273;alternative_source_transcripts=hg002_chrY_paternal_284.1,hg002_chrY_paternal_284.1;transcript_id=HG03521_ch_T0000398;gene_id=HG03521_ch_G0000157;Parent=HG03521_ch_T0000398;transcript_name=hg002_chrY_paternal_284.1;gene_name=LOC105379273;ID=exon:HG03521_ch_T0000398:2;Name=LOC105379273;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	14291966	14299580	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;gene_id=HG03521_ch_G0000158;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=liftoff;ID=HG03521_ch_G0000158;Name=LOC112268312
HG03521_chrY	CAT	transcript	14291966	14298517	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000399;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_G0000158;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03521_ch_T0000399;Name=LOC112268312
HG03521_chrY	CAT	exon	14291966	14292055	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000399;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000399;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000399:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14292056	14292241	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000399;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000399;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000399:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14292242	14292403	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000399;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000399;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000399:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14292404	14298381	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000399;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000399;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000399:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14298382	14298517	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000399;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000399;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000399:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14291966	14299580	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000400;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_G0000158;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03521_ch_T0000400;Name=LOC112268312
HG03521_chrY	CAT	exon	14291966	14292055	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000400;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000400;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000400:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14292056	14292241	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000400;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000400;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000400:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14292242	14292403	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000400;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000400;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000400:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14292404	14298381	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000400;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000400;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000400:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14298382	14299580	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000400;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000400;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000400:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14292089	14299580	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000401;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_G0000158;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03521_ch_T0000401;Name=LOC112268312
HG03521_chrY	CAT	exon	14292089	14292107	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000401;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000401:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14292108	14292241	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000401;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000401:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14292242	14292403	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000401;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000401:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14292404	14298381	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000401;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000401:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14298382	14299580	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;transcript_id=HG03521_ch_T0000401;gene_id=HG03521_ch_G0000158;Parent=HG03521_ch_T0000401;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000401:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	14334762	14343696	.	-	.	source_gene_common_name=LOC107987343;source_gene=hg002_chrY_paternal_305;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;gene_id=HG03521_ch_G0000159;gene_biotype=lncRNA;gene_name=LOC107987343;gene_sources=liftoff;ID=HG03521_ch_G0000159;Name=LOC107987343
HG03521_chrY	CAT	transcript	14334762	14343696	1000	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03521_ch_T0000402;gene_id=HG03521_ch_G0000159;Parent=HG03521_ch_G0000159;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=HG03521_ch_T0000402;Name=LOC107987343
HG03521_chrY	CAT	exon	14334762	14336154	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03521_ch_T0000402;gene_id=HG03521_ch_G0000159;Parent=HG03521_ch_T0000402;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG03521_ch_T0000402:0;Name=LOC107987343;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14336155	14338716	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03521_ch_T0000402;gene_id=HG03521_ch_G0000159;Parent=HG03521_ch_T0000402;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG03521_ch_T0000402:0;Name=LOC107987343;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14338717	14338843	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03521_ch_T0000402;gene_id=HG03521_ch_G0000159;Parent=HG03521_ch_T0000402;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG03521_ch_T0000402:1;Name=LOC107987343;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14338844	14341800	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03521_ch_T0000402;gene_id=HG03521_ch_G0000159;Parent=HG03521_ch_T0000402;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=intron:HG03521_ch_T0000402:1;Name=LOC107987343;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14341801	14343696	.	-	.	source_transcript=hg002_chrY_paternal_305.1;source_transcript_name=hg002_chrY_paternal_305.1;source_gene=hg002_chrY_paternal_305;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_305;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_305.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_305.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987343;alternative_source_transcripts=hg002_chrY_paternal_305.1,hg002_chrY_paternal_305.1;transcript_id=HG03521_ch_T0000402;gene_id=HG03521_ch_G0000159;Parent=HG03521_ch_T0000402;transcript_name=hg002_chrY_paternal_305.1;gene_name=LOC107987343;ID=exon:HG03521_ch_T0000402:2;Name=LOC107987343;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	14386289	14401763	.	-	.	source_gene_common_name=GYG2P1;source_gene=hg002_chrY_paternal_306;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;gene_id=HG03521_ch_G0000160;gene_biotype=transcribed_pseudogene;gene_name=GYG2P1;gene_sources=liftoff;ID=HG03521_ch_G0000160;Name=GYG2P1
HG03521_chrY	CAT	transcript	14386289	14401763	1000	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03521_ch_T0000403;gene_id=HG03521_ch_G0000160;Parent=HG03521_ch_G0000160;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=HG03521_ch_T0000403;Name=GYG2P1
HG03521_chrY	CAT	exon	14386289	14386673	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03521_ch_T0000403;gene_id=HG03521_ch_G0000160;Parent=HG03521_ch_T0000403;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03521_ch_T0000403:0;Name=GYG2P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14386674	14386968	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03521_ch_T0000403;gene_id=HG03521_ch_G0000160;Parent=HG03521_ch_T0000403;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03521_ch_T0000403:0;Name=GYG2P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14386969	14387110	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03521_ch_T0000403;gene_id=HG03521_ch_G0000160;Parent=HG03521_ch_T0000403;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03521_ch_T0000403:1;Name=GYG2P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14387111	14387365	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03521_ch_T0000403;gene_id=HG03521_ch_G0000160;Parent=HG03521_ch_T0000403;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03521_ch_T0000403:1;Name=GYG2P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14387366	14387482	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03521_ch_T0000403;gene_id=HG03521_ch_G0000160;Parent=HG03521_ch_T0000403;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03521_ch_T0000403:2;Name=GYG2P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14387483	14400488	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03521_ch_T0000403;gene_id=HG03521_ch_G0000160;Parent=HG03521_ch_T0000403;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03521_ch_T0000403:2;Name=GYG2P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14400489	14400627	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03521_ch_T0000403;gene_id=HG03521_ch_G0000160;Parent=HG03521_ch_T0000403;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03521_ch_T0000403:3;Name=GYG2P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14400628	14401722	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03521_ch_T0000403;gene_id=HG03521_ch_G0000160;Parent=HG03521_ch_T0000403;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=intron:HG03521_ch_T0000403:3;Name=GYG2P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14401723	14401763	.	-	.	source_transcript=hg002_chrY_paternal_306.1;source_transcript_name=hg002_chrY_paternal_306.1;source_gene=hg002_chrY_paternal_306;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_306;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_306.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_306.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GYG2P1;alternative_source_transcripts=hg002_chrY_paternal_306.1,hg002_chrY_paternal_306.1;transcript_id=HG03521_ch_T0000403;gene_id=HG03521_ch_G0000160;Parent=HG03521_ch_T0000403;transcript_name=hg002_chrY_paternal_306.1;gene_name=GYG2P1;ID=exon:HG03521_ch_T0000403:4;Name=GYG2P1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	14641695	14643862	.	-	.	source_gene_common_name=LOC112268311;source_gene=hg002_chrY_paternal_311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;gene_id=HG03521_ch_G0000161;gene_biotype=lncRNA;gene_name=LOC112268311;gene_sources=liftoff;ID=HG03521_ch_G0000161;Name=LOC112268311
HG03521_chrY	CAT	transcript	14641695	14643862	1000	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03521_ch_T0000404;gene_id=HG03521_ch_G0000161;Parent=HG03521_ch_G0000161;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG03521_ch_T0000404;Name=LOC112268311
HG03521_chrY	CAT	exon	14641695	14643130	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03521_ch_T0000404;gene_id=HG03521_ch_G0000161;Parent=HG03521_ch_T0000404;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03521_ch_T0000404:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14643131	14643739	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03521_ch_T0000404;gene_id=HG03521_ch_G0000161;Parent=HG03521_ch_T0000404;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG03521_ch_T0000404:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14643740	14643862	.	-	.	source_transcript=hg002_chrY_paternal_311.1;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.1,hg002_chrY_paternal_311.1;transcript_id=HG03521_ch_T0000404;gene_id=HG03521_ch_G0000161;Parent=HG03521_ch_T0000404;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03521_ch_T0000404:1;Name=LOC112268311;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14641695	14643871	1000	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03521_ch_T0000405;gene_id=HG03521_ch_G0000161;Parent=HG03521_ch_G0000161;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=HG03521_ch_T0000405;Name=LOC112268311
HG03521_chrY	CAT	exon	14641695	14643130	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03521_ch_T0000405;gene_id=HG03521_ch_G0000161;Parent=HG03521_ch_T0000405;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03521_ch_T0000405:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14643131	14643682	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03521_ch_T0000405;gene_id=HG03521_ch_G0000161;Parent=HG03521_ch_T0000405;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=intron:HG03521_ch_T0000405:0;Name=LOC112268311;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14643683	14643871	.	-	.	source_transcript=hg002_chrY_paternal_311.2;source_transcript_name=hg002_chrY_paternal_311.1;source_gene=hg002_chrY_paternal_311;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_311;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_311.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_311.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268311;alternative_source_transcripts=hg002_chrY_paternal_311.2,hg002_chrY_paternal_311.2;transcript_id=HG03521_ch_T0000405;gene_id=HG03521_ch_G0000161;Parent=HG03521_ch_T0000405;transcript_name=hg002_chrY_paternal_311.1;gene_name=LOC112268311;ID=exon:HG03521_ch_T0000405:1;Name=LOC112268311;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	14642731	14672607	.	+	.	source_gene_common_name=TTTY15;source_gene=hg002_chrY_paternal_312;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;gene_id=HG03521_ch_G0000162;gene_biotype=lncRNA;gene_name=TTTY15;gene_sources=liftoff;ID=HG03521_ch_G0000162;Name=TTTY15
HG03521_chrY	CAT	transcript	14642731	14672607	1000	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03521_ch_T0000406;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_G0000162;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03521_ch_T0000406;Name=TTTY15
HG03521_chrY	CAT	exon	14642731	14643085	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03521_ch_T0000406;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000406;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000406:0;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14643086	14645018	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03521_ch_T0000406;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000406;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000406:0;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14645019	14645065	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03521_ch_T0000406;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000406;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000406:1;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14645066	14666886	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03521_ch_T0000406;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000406;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000406:1;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14666887	14666980	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03521_ch_T0000406;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000406;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000406:2;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14666981	14667837	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03521_ch_T0000406;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000406;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000406:2;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14667838	14672607	.	+	.	source_transcript=hg002_chrY_paternal_312.1;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.1,hg002_chrY_paternal_312.1;transcript_id=HG03521_ch_T0000406;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000406;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000406:3;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14642731	14672607	1000	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03521_ch_T0000407;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_G0000162;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03521_ch_T0000407;Name=TTTY15
HG03521_chrY	CAT	exon	14642731	14643085	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03521_ch_T0000407;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000407:0;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14643086	14666886	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03521_ch_T0000407;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000407:0;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14666887	14666980	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03521_ch_T0000407;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000407:1;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14666981	14667837	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03521_ch_T0000407;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000407:1;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14667838	14672607	.	+	.	source_transcript=hg002_chrY_paternal_312.2;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.2,hg002_chrY_paternal_312.2;transcript_id=HG03521_ch_T0000407;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000407;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000407:2;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14642731	14672607	1000	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03521_ch_T0000408;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_G0000162;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03521_ch_T0000408;Name=TTTY15
HG03521_chrY	CAT	exon	14642731	14643085	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03521_ch_T0000408;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000408:0;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14643086	14666886	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03521_ch_T0000408;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000408:0;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14666887	14666980	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03521_ch_T0000408;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000408:1;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14666981	14668058	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03521_ch_T0000408;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000408:1;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14668059	14672607	.	+	.	source_transcript=hg002_chrY_paternal_312.3;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.3,hg002_chrY_paternal_312.3;transcript_id=HG03521_ch_T0000408;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000408;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000408:2;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14642731	14672607	1000	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03521_ch_T0000409;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_G0000162;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03521_ch_T0000409;Name=TTTY15
HG03521_chrY	CAT	exon	14642731	14643085	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03521_ch_T0000409;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000409:0;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14643086	14645018	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03521_ch_T0000409;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000409:0;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14645019	14645065	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03521_ch_T0000409;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000409:1;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14645066	14666886	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03521_ch_T0000409;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000409:1;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14666887	14666980	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03521_ch_T0000409;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000409:2;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14666981	14668058	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03521_ch_T0000409;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000409:2;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14668059	14672607	.	+	.	source_transcript=hg002_chrY_paternal_312.4;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.4,hg002_chrY_paternal_312.4;transcript_id=HG03521_ch_T0000409;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000409;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000409:3;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14642731	14672607	1000	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03521_ch_T0000410;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_G0000162;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=HG03521_ch_T0000410;Name=TTTY15
HG03521_chrY	CAT	exon	14642731	14643085	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03521_ch_T0000410;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000410:0;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14643086	14645018	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03521_ch_T0000410;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000410:0;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14645019	14645065	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03521_ch_T0000410;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000410:1;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14645066	14666886	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03521_ch_T0000410;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000410:1;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14666887	14666980	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03521_ch_T0000410;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000410:2;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14666981	14670699	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03521_ch_T0000410;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=intron:HG03521_ch_T0000410:2;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14670700	14672607	.	+	.	source_transcript=hg002_chrY_paternal_312.5;source_transcript_name=hg002_chrY_paternal_312.1;source_gene=hg002_chrY_paternal_312;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_312;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_312.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_312.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY15;alternative_source_transcripts=hg002_chrY_paternal_312.5,hg002_chrY_paternal_312.5;transcript_id=HG03521_ch_T0000410;gene_id=HG03521_ch_G0000162;Parent=HG03521_ch_T0000410;transcript_name=hg002_chrY_paternal_312.1;gene_name=TTTY15;ID=exon:HG03521_ch_T0000410:3;Name=TTTY15;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	14681605	14841211	.	+	.	source_gene_common_name=USP9Y;source_gene=hg002_chrY_paternal_313;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;gene_id=HG03521_ch_G0000163;gene_biotype=protein_coding;gene_name=USP9Y;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000163;Name=USP9Y
HG03521_chrY	CAT	transcript	14681605	14841211	100	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_G0000163;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG03521_ch_T0000411;Name=USP9Y
HG03521_chrY	CAT	exon	14681605	14682429	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:0;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14682430	14689011	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:0;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14689012	14689071	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:1;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14689072	14689765	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:1;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14689766	14689921	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:2;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14689826	14689921	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:0;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	14689826	14689828	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG03521_ch_T0000411;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14689922	14700966	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:2;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14700967	14701115	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:3;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14700967	14701115	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:1;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14701116	14702484	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:3;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14702485	14702564	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:4;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14702485	14702564	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:2;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14702565	14705489	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:4;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14705490	14705602	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:5;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14705490	14705602	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:3;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14705603	14706951	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:5;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14706952	14707170	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:6;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14706952	14707170	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:4;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14707171	14715988	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:6;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14715989	14716104	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:7;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14715989	14716104	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:5;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14716105	14716374	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:7;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14716375	14716626	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:8;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14716375	14716626	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:6;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14716627	14716787	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:8;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14716788	14716926	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:9;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14716788	14716926	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:7;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14716927	14718533	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:9;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14718534	14718686	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:10;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14718534	14718686	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:8;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14718687	14719901	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:10;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14719902	14720006	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:11;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14719902	14720006	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:9;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14720007	14737568	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:11;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14737569	14737775	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:12;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14737569	14737775	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:10;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14737776	14738882	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:12;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14738883	14739019	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:13;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14738883	14739019	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:11;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14739020	14740860	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:13;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14740861	14740994	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:14;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14740861	14740994	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:12;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14740995	14751444	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:14;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14751445	14751532	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:15;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14751445	14751532	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:13;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14751533	14753959	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:15;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14753960	14754302	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:16;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14753960	14754302	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:14;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14754303	14755847	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:16;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14755848	14755943	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:17;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14755848	14755943	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:15;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14755944	14757025	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:17;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14757026	14757237	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:18;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14757026	14757237	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:16;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14757238	14758395	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:18;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14758396	14758636	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:19;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14758396	14758636	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:17;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14758637	14758982	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:19;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14758983	14759132	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:20;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14758983	14759132	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:18;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14759133	14759902	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:20;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14759903	14760023	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:21;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14759903	14760023	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:19;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14760024	14766579	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:21;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14766580	14766710	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:22;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14766580	14766710	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:20;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14766711	14766897	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:22;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14766898	14767176	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:23;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14766898	14767176	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:21;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14767177	14770781	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:23;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14770782	14770907	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:24;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14770782	14770907	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:22;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14770908	14771873	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:24;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14771874	14771999	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:25;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14771874	14771999	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:23;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14772000	14773406	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:25;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14773407	14773576	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:26;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14773407	14773576	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:24;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14773577	14790554	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:26;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14790555	14790663	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:27;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14790555	14790663	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:25;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14790664	14791047	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:27;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14791048	14791194	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:28;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14791048	14791194	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:26;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14791195	14792010	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:28;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14792011	14792157	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:29;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14792011	14792157	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:27;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14792158	14793205	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:29;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14793206	14793428	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:30;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14793206	14793428	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:28;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14793429	14796499	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:30;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14796500	14796720	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:31;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14796500	14796720	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:29;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14796721	14798795	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:31;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14798796	14798986	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:32;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14798796	14798986	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:30;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14798987	14814059	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:32;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14814060	14814233	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:33;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14814060	14814233	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:31;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14814234	14818282	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:33;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14818283	14818424	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:34;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14818283	14818424	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:32;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14818425	14820235	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:34;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14820236	14820986	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:35;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14820236	14820986	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:33;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14820987	14821381	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:35;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14821382	14821505	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:36;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14821382	14821505	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:34;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14821506	14822611	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:36;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14822612	14822837	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:37;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14822612	14822837	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:35;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14822838	14823435	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:37;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14823436	14823565	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:38;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14823436	14823565	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:36;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14823566	14826704	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:38;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14826705	14826890	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:39;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14826705	14826890	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:37;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14826891	14827304	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:39;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14827305	14827525	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:40;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14827305	14827525	.	+	2	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:38;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14827526	14827610	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:40;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14827611	14827699	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:41;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14827611	14827699	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:39;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14827700	14836711	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:41;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14836712	14836868	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:42;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14836712	14836868	.	+	1	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:40;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14836869	14837004	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:42;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14837005	14837217	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:43;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14837005	14837217	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:41;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14837218	14837937	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:43;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14837938	14838033	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:44;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14837938	14838033	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:42;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14838034	14839650	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000411:44;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14839651	14841211	.	+	.	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000411:45;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14839651	14839788	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000411:43;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	14839786	14839788	.	+	0	source_transcript=hg002_chrY_paternal_313.1;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.1,hg002_chrY_paternal_313.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000411;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000411;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG03521_ch_T0000411;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14688231	14841211	100	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_G0000163;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG03521_ch_T0000412;Name=USP9Y
HG03521_chrY	CAT	exon	14688231	14688259	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:0;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14688260	14689011	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:0;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14689012	14689071	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:1;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14689072	14689765	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:1;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14689766	14689921	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:2;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14689826	14689921	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:0;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	14689826	14689828	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG03521_ch_T0000412;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14689922	14700966	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:2;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14700967	14701115	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:3;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14700967	14701115	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:1;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14701116	14702484	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:3;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14702485	14702564	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:4;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14702485	14702564	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:2;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14702565	14705489	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:4;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14705490	14705602	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:5;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14705490	14705602	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:3;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14705603	14706951	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:5;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14706952	14707170	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:6;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14706952	14707170	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:4;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14707171	14715988	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:6;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14715989	14716104	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:7;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14715989	14716104	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:5;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14716105	14716374	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:7;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14716375	14716626	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:8;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14716375	14716626	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:6;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14716627	14716787	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:8;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14716788	14716926	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:9;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14716788	14716926	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:7;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14716927	14718533	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:9;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14718534	14718686	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:10;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14718534	14718686	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:8;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14718687	14719901	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:10;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14719902	14720006	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:11;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14719902	14720006	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:9;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14720007	14737568	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:11;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14737569	14737775	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:12;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14737569	14737775	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:10;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14737776	14738882	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:12;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14738883	14739019	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:13;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14738883	14739019	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:11;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14739020	14740860	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:13;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14740861	14740994	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:14;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14740861	14740994	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:12;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14740995	14751444	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:14;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14751445	14751532	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:15;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14751445	14751532	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:13;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14751533	14753959	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:15;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14753960	14754302	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:16;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14753960	14754302	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:14;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14754303	14755847	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:16;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14755848	14755943	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:17;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14755848	14755943	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:15;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14755944	14757025	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:17;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14757026	14757237	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:18;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14757026	14757237	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:16;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14757238	14758395	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:18;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14758396	14758636	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:19;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14758396	14758636	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:17;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14758637	14758982	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:19;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14758983	14759132	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:20;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14758983	14759132	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:18;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14759133	14759902	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:20;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14759903	14760023	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:21;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14759903	14760023	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:19;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14760024	14766579	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:21;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14766580	14766710	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:22;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14766580	14766710	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:20;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14766711	14766897	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:22;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14766898	14767176	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:23;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14766898	14767176	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:21;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14767177	14770781	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:23;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14770782	14770907	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:24;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14770782	14770907	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:22;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14770908	14771873	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:24;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14771874	14771999	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:25;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14771874	14771999	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:23;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14772000	14773406	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:25;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14773407	14773576	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:26;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14773407	14773576	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:24;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14773577	14790554	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:26;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14790555	14790663	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:27;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14790555	14790663	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:25;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14790664	14791047	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:27;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14791048	14791194	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:28;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14791048	14791194	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:26;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14791195	14792010	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:28;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14792011	14792157	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:29;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14792011	14792157	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:27;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14792158	14793205	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:29;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14793206	14793428	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:30;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14793206	14793428	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:28;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14793429	14796499	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:30;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14796500	14796720	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:31;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14796500	14796720	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:29;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14796721	14798795	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:31;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14798796	14798986	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:32;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14798796	14798986	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:30;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14798987	14814059	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:32;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14814060	14814233	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:33;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14814060	14814233	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:31;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14814234	14818282	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:33;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14818283	14818424	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:34;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14818283	14818424	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:32;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14818425	14820235	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:34;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14820236	14820986	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:35;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14820236	14820986	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:33;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14820987	14821381	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:35;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14821382	14821505	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:36;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14821382	14821505	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:34;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14821506	14822611	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:36;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14822612	14822837	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:37;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14822612	14822837	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:35;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14822838	14823435	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:37;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14823436	14823565	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:38;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14823436	14823565	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:36;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14823566	14826704	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:38;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14826705	14826890	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:39;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14826705	14826890	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:37;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14826891	14827304	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:39;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14827305	14827525	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:40;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14827305	14827525	.	+	2	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:38;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14827526	14827610	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:40;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14827611	14827699	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:41;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14827611	14827699	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:39;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14827700	14836711	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:41;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14836712	14836868	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:42;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14836712	14836868	.	+	1	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:40;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14836869	14837004	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:42;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14837005	14837217	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:43;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14837005	14837217	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:41;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14837218	14837937	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:43;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14837938	14838033	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:44;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14837938	14838033	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:42;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14838034	14839650	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000412:44;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14839651	14841211	.	+	.	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000412:45;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14839651	14839788	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000412:43;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	14839786	14839788	.	+	0	source_transcript=hg002_chrY_paternal_313.2;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.2,hg002_chrY_paternal_313.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000412;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000412;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG03521_ch_T0000412;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14689834	14841211	100	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_G0000163;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=HG03521_ch_T0000413;Name=USP9Y
HG03521_chrY	CAT	exon	14689834	14689921	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:0;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14689922	14695016	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:0;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14695017	14695167	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:1;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14695168	14700966	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:1;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14700967	14701115	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:2;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14701105	14701115	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:0;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	14701105	14701107	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=start_codon:HG03521_ch_T0000413;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14701116	14702484	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:2;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14702485	14702564	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:3;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14702485	14702564	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:1;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14702565	14705489	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:3;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14705490	14705602	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:4;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14705490	14705602	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:2;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14705603	14706951	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:4;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14706952	14707170	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:5;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14706952	14707170	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:3;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14707171	14715988	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:5;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14715989	14716104	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:6;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14715989	14716104	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:4;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14716105	14716374	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:6;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14716375	14716626	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:7;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14716375	14716626	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:5;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14716627	14716787	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:7;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14716788	14716926	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:8;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14716788	14716926	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:6;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14716927	14718533	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:8;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14718534	14718686	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:9;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14718534	14718686	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:7;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14718687	14719901	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:9;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14719902	14720006	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:10;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14719902	14720006	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:8;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14720007	14737568	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:10;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14737569	14737775	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:11;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14737569	14737775	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:9;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14737776	14738882	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:11;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14738883	14739019	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:12;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14738883	14739019	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:10;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14739020	14740860	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:12;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14740861	14740994	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:13;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14740861	14740994	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:11;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14740995	14751444	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:13;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14751445	14751532	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:14;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14751445	14751532	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:12;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14751533	14753959	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:14;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14753960	14754302	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:15;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14753960	14754302	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:13;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14754303	14755847	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:15;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14755848	14755943	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:16;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14755848	14755943	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:14;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14755944	14757025	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:16;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14757026	14757237	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:17;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14757026	14757237	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:15;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14757238	14758395	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:17;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14758396	14758636	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:18;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14758396	14758636	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:16;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14758637	14758982	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:18;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14758983	14759132	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:19;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14758983	14759132	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:17;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14759133	14759902	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:19;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14759903	14760023	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:20;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14759903	14760023	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:18;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14760024	14766579	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:20;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14766580	14766710	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:21;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14766580	14766710	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:19;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14766711	14766897	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:21;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14766898	14767176	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:22;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14766898	14767176	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:20;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14767177	14770781	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:22;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14770782	14770907	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:23;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14770782	14770907	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:21;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14770908	14771873	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:23;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14771874	14771999	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:24;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14771874	14771999	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:22;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14772000	14773406	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:24;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14773407	14773576	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:25;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14773407	14773576	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:23;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14773577	14790554	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:25;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14790555	14790663	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:26;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14790555	14790663	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:24;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14790664	14791047	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:26;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14791048	14791194	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:27;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14791048	14791194	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:25;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14791195	14792010	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:27;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14792011	14792157	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:28;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14792011	14792157	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:26;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14792158	14793205	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:28;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14793206	14793428	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:29;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14793206	14793428	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:27;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14793429	14796499	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:29;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14796500	14796720	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:30;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14796500	14796720	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:28;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14796721	14798795	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:30;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14798796	14798986	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:31;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14798796	14798986	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:29;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14798987	14814059	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:31;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14814060	14814233	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:32;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14814060	14814233	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:30;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14814234	14818282	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:32;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14818283	14818424	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:33;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14818283	14818424	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:31;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14818425	14820235	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:33;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14820236	14820986	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:34;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14820236	14820986	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:32;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14820987	14821381	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:34;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14821382	14821505	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:35;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14821382	14821505	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:33;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14821506	14822611	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:35;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14822612	14822837	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:36;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14822612	14822837	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:34;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14822838	14823435	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:36;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14823436	14823565	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:37;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14823436	14823565	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:35;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14823566	14826704	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:37;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14826705	14826890	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:38;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14826705	14826890	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:36;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14826891	14827304	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:38;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14827305	14827525	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:39;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14827305	14827525	.	+	2	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:37;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14827526	14827610	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:39;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14827611	14827699	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:40;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14827611	14827699	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:38;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14827700	14836711	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:40;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14836712	14836868	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:41;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14836712	14836868	.	+	1	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:39;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14836869	14837004	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:41;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14837005	14837217	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:42;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14837005	14837217	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:40;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14837218	14837937	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:42;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14837938	14838033	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:43;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14837938	14838033	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:41;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14838034	14839650	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=intron:HG03521_ch_T0000413:43;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14839651	14841211	.	+	.	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=exon:HG03521_ch_T0000413:44;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14839651	14839788	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=CDS:HG03521_ch_T0000413:42;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	14839786	14839788	.	+	0	source_transcript=hg002_chrY_paternal_313.3;source_transcript_name=hg002_chrY_paternal_313.3;source_gene=hg002_chrY_paternal_313;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_313;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_313.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_313.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=USP9Y;alternative_source_transcripts=hg002_chrY_paternal_313.3,hg002_chrY_paternal_313.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000413;gene_id=HG03521_ch_G0000163;Parent=HG03521_ch_T0000413;transcript_name=hg002_chrY_paternal_313.3;gene_name=USP9Y;ID=stop_codon:HG03521_ch_T0000413;Name=USP9Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	14885238	14900849	.	+	.	source_gene_common_name=DDX3Y;source_gene=hg002_chrY_paternal_315;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;gene_id=HG03521_ch_G0000164;gene_biotype=protein_coding;gene_name=DDX3Y;gene_sources=liftoff,augTM,transMap;ID=HG03521_ch_G0000164;Name=DDX3Y
HG03521_chrY	CAT	transcript	14885238	14900849	1000	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_G0000164;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03521_ch_T0000414;Name=DDX3Y
HG03521_chrY	CAT	exon	14885238	14885351	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14885352	14887907	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14887908	14887965	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14887966	14889730	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14889731	14889778	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14889779	14892209	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14892210	14892339	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14892340	14893097	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14893098	14893433	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14893434	14894088	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894089	14894224	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14894225	14894934	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894935	14895598	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895599	14896000	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896001	14896145	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896146	14896253	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896254	14896398	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896399	14896631	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896632	14897005	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897006	14897277	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897278	14897431	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897432	14897773	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897774	14897913	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897914	14898413	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000414:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14898414	14900849	.	+	.	source_transcript=hg002_chrY_paternal_315.10;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.10;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.10;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.4,hg002_chrY_paternal_315.10,hg002_chrY_paternal_315.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000414;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000414;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000414:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14885238	14900849	1000	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_G0000164;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03521_ch_T0000415;Name=DDX3Y
HG03521_chrY	CAT	exon	14885238	14885351	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14885352	14887907	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14887908	14887965	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14887966	14889730	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14889731	14889778	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14889779	14892209	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14892210	14892339	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14892340	14893097	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14893098	14893433	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14893434	14894088	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894089	14894224	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14894225	14894934	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894935	14895020	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895021	14895254	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14895255	14895353	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895354	14895437	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14895438	14895598	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895599	14896000	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896001	14896145	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896146	14896253	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896254	14896398	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896399	14896631	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896632	14897005	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897006	14897277	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897278	14897431	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897432	14897773	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897774	14897913	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897914	14898413	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000415:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14898414	14900849	.	+	.	source_transcript=hg002_chrY_paternal_315.11;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.11;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.11;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.11;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000415;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000415;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000415:14;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14885238	14900849	1000	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_G0000164;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03521_ch_T0000416;Name=DDX3Y
HG03521_chrY	CAT	exon	14885238	14885351	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14885352	14887907	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14887908	14887965	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14887966	14889730	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14889731	14889778	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14889779	14893097	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14893098	14893433	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14893434	14894088	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894089	14894224	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14894225	14894934	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894935	14895598	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895599	14896000	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896001	14896145	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896146	14896253	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896254	14896398	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896399	14896631	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896632	14897005	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897006	14897277	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897278	14897431	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897432	14897773	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897774	14897913	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897914	14898413	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000416:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14898414	14900849	.	+	.	source_transcript=hg002_chrY_paternal_315.5;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.5;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000416;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000416;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000416:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14885238	14900849	1000	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_G0000164;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03521_ch_T0000417;Name=DDX3Y
HG03521_chrY	CAT	exon	14885238	14885351	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14885352	14887907	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14887908	14887965	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14887966	14889730	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14889731	14889778	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14889779	14892209	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14892210	14892339	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14892340	14893097	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14893098	14893433	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14893434	14894088	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894089	14894224	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14894225	14894934	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894935	14895598	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895599	14896000	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896001	14896145	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896146	14896253	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896254	14896398	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896399	14896631	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896632	14897005	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897006	14897346	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897347	14897431	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897432	14897773	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897774	14897913	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897914	14898413	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000417:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14898414	14900849	.	+	.	source_transcript=hg002_chrY_paternal_315.6;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.6;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.6;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.6;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000417;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000417;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000417:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14885238	14900849	1000	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_G0000164;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03521_ch_T0000418;Name=DDX3Y
HG03521_chrY	CAT	exon	14885238	14885351	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14885352	14887907	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14887908	14887965	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14887966	14889730	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14889731	14889778	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14889779	14892209	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14892210	14892339	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14892340	14893097	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14893098	14893433	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14893434	14894088	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894089	14894224	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14894225	14894934	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894935	14895020	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895021	14895254	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14895255	14895353	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895354	14895454	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14895455	14895598	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895599	14896000	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896001	14896145	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896146	14896253	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896254	14896398	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896399	14896631	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896632	14897005	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897006	14897277	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897278	14897431	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897432	14897773	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897774	14897913	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897914	14898413	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000418:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14898414	14900849	.	+	.	source_transcript=hg002_chrY_paternal_315.7;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.7;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.7;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.7;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000418;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000418;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000418:14;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14886075	14900849	1000	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_G0000164;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03521_ch_T0000419;Name=DDX3Y
HG03521_chrY	CAT	exon	14886075	14886185	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14886186	14887907	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14887908	14887965	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14887966	14889730	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14889731	14889778	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14889779	14892209	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14892210	14892339	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14892340	14893097	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14893098	14893433	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14893434	14894088	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894089	14894224	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14894225	14894934	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894935	14895020	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895021	14895254	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14895255	14895353	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895354	14895437	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14895438	14895598	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895599	14896000	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896001	14896145	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896146	14896253	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896254	14896398	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896399	14896631	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896632	14897005	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897006	14897277	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897278	14897431	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897432	14897773	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897774	14897913	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897914	14898413	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000419:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14898414	14900849	.	+	.	source_transcript=hg002_chrY_paternal_315.12;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.12;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.12;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.12;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000419;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000419;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000419:14;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14886075	14900849	1000	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_G0000164;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=HG03521_ch_T0000420;Name=DDX3Y
HG03521_chrY	CAT	exon	14886075	14886185	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14886186	14887907	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14887908	14887965	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14887966	14889730	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14889731	14889778	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14889779	14892209	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14892210	14892339	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14892340	14893097	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14893098	14893433	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14893434	14894088	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894089	14894224	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14894225	14894934	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894935	14895598	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895599	14896000	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896001	14896145	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896146	14896253	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896254	14896398	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896399	14896631	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896632	14897005	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897006	14897277	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897278	14897431	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897432	14897773	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897774	14897913	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897914	14898413	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000420:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14898414	14900849	.	+	.	source_transcript=hg002_chrY_paternal_315.13;source_transcript_name=hg002_chrY_paternal_315.1;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_315.13;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.13;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.14,hg002_chrY_paternal_315.13;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000420;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000420;transcript_name=hg002_chrY_paternal_315.1;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000420:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	14887940	14900849	9960	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_G0000164;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=HG03521_ch_T0000421;Name=DDX3Y
HG03521_chrY	CAT	exon	14887940	14887965	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14887966	14889730	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14889731	14889778	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14889779	14893097	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14893098	14893433	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14893434	14894088	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894089	14894224	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14894104	14894224	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:0;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	14894104	14894106	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=start_codon:HG03521_ch_T0000421;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14894225	14894934	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14894935	14895020	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14894935	14895020	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:1;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895021	14895254	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14895255	14895353	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14895255	14895353	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:2;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895354	14895437	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14895438	14895598	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14895438	14895598	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:3;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14895599	14896000	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896001	14896145	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14896001	14896145	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:4;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896146	14896253	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896254	14896398	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14896254	14896398	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:5;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896399	14896631	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896632	14896813	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14896632	14896813	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:6;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14896814	14896887	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14896888	14897005	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14896888	14897005	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:7;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897006	14897277	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897278	14897431	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14897278	14897431	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:8;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897432	14897773	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:11;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14897774	14897913	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14897774	14897913	.	+	1	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:9;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	14897914	14898413	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=intron:HG03521_ch_T0000421:12;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	14898414	14900849	.	+	.	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=exon:HG03521_ch_T0000421:13;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	14898414	14898493	.	+	2	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=CDS:HG03521_ch_T0000421:10;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	14898491	14898493	.	+	0	source_transcript=hg002_chrY_paternal_315.17;source_transcript_name=hg002_chrY_paternal_315.17;source_gene=hg002_chrY_paternal_315;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_315;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_315.17;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_315.17;transcript_score=292.8571428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DDX3Y;alternative_source_transcripts=hg002_chrY_paternal_315.17;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000421;gene_id=HG03521_ch_G0000164;Parent=HG03521_ch_T0000421;transcript_name=hg002_chrY_paternal_315.17;gene_name=DDX3Y;ID=stop_codon:HG03521_ch_T0000421;Name=DDX3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	15091696	15106011	.	+	.	source_gene_common_name=LOC112268312;source_gene=hg002_chrY_paternal_318;alternative_source_transcripts=hg002_chrY_paternal_318.1;gene_id=HG03521_ch_G0000165;gene_biotype=lncRNA;gene_name=LOC112268312;gene_sources=transMap;ID=HG03521_ch_G0000165;Name=LOC112268312
HG03521_chrY	CAT	transcript	15091696	15099278	1000	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03521_ch_T0000422;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_G0000165;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03521_ch_T0000422;Name=LOC112268312
HG03521_chrY	CAT	exon	15091696	15091784	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03521_ch_T0000422;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000422;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000422:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15091785	15091970	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03521_ch_T0000422;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000422;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000422:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15091971	15092133	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03521_ch_T0000422;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000422;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000422:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15092134	15098079	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03521_ch_T0000422;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000422;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000422:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15098080	15099278	.	+	.	source_transcript=hg002_chrY_paternal_318.1;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.1;transcript_score=291.867;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.1;transcript_id=HG03521_ch_T0000422;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000422;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000422:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15091696	15106011	1000	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03521_ch_T0000423;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_G0000165;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03521_ch_T0000423;Name=LOC112268312
HG03521_chrY	CAT	exon	15091696	15091784	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03521_ch_T0000423;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000423:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15091785	15091970	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03521_ch_T0000423;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000423:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15091971	15092133	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03521_ch_T0000423;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000423:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15092134	15098079	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03521_ch_T0000423;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000423:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15098080	15098216	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03521_ch_T0000423;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000423:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15098217	15105644	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03521_ch_T0000423;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000423:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15105645	15106011	.	+	.	source_transcript=hg002_chrY_paternal_318.2;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.2;transcript_score=298.543;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.2;transcript_id=HG03521_ch_T0000423;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000423;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000423:3;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15091818	15099278	1000	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03521_ch_T0000424;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_G0000165;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=HG03521_ch_T0000424;Name=LOC112268312
HG03521_chrY	CAT	exon	15091818	15091836	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03521_ch_T0000424;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000424:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15091837	15091970	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03521_ch_T0000424;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000424:0;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15091971	15092133	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03521_ch_T0000424;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000424:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15092134	15098079	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03521_ch_T0000424;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=intron:HG03521_ch_T0000424:1;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15098080	15099278	.	+	.	source_transcript=hg002_chrY_paternal_318.3;source_transcript_name=hg002_chrY_paternal_318.1;source_gene=hg002_chrY_paternal_318;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_318;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_318.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_318.3;transcript_score=291.456;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC112268312;alternative_source_transcripts=hg002_chrY_paternal_318.3;transcript_id=HG03521_ch_T0000424;gene_id=HG03521_ch_G0000165;Parent=HG03521_ch_T0000424;transcript_name=hg002_chrY_paternal_318.1;gene_name=LOC112268312;ID=exon:HG03521_ch_T0000424:2;Name=LOC112268312;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	15214264	15461024	.	-	.	source_gene_common_name=UTY;source_gene=hg002_chrY_paternal_321;alternative_source_transcripts=hg002_chrY_paternal_321.4;gene_id=HG03521_ch_G0000166;gene_biotype=protein_coding;gene_name=UTY;gene_sources=liftoff,augTM,transMap;ID=HG03521_ch_G0000166;Name=UTY
HG03521_chrY	CAT	transcript	15214264	15460387	1000	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000425;Name=UTY
HG03521_chrY	CAT	exon	15214264	15215195	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15215196	15231366	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231367	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338997	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338998	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000425:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15460387	.	-	.	source_transcript=hg002_chrY_paternal_321.4;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.4;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.4;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000425;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000425;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000425:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000426;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000426:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.41;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.41;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.41;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.41;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000426;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000426;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000426:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000427;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15384163	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15384164	15384269	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15384270	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000427:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.42;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.42;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.42;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.42;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000427;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000427;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000427:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000428;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286028	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286029	15286096	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286097	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349638	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349639	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15384163	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15384164	15384269	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15384270	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000428:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.43;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.43;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.43;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.43;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000428;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000428;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000428:29;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000429;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231366	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231367	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15314595	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15314596	15314718	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15314719	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000429:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.44;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.44;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.44;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.44;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000429;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000429;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000429:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000430;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335752	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335753	15335906	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335907	15336015	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336016	15336081	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336082	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000430:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.45;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.45;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.45;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.45;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000430;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000430;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000430:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000431;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316178	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316179	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000431:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.46;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.46;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.46;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.46;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000431;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000431;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000431:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000432;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000432:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.47;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.47;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.47;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.47;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000432;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000432;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000432:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000433;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15456256	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15456257	15456379	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15456380	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000433:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.48;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.48;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.48;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.48;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000433;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000433;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000433:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000434;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316178	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316179	15335752	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335753	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000434:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.49;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.49;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.49;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.49;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000434;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000434;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000434:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000435;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15258616	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15258617	15258721	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15258722	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340858	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340859	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000435:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.50;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.50;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.50;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.50;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000435;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000435;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000435:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000436;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338688	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338689	15338824	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338825	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000436:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.51;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.51;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.51;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.51;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000436;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000436;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000436:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000437;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338688	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338689	15338899	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338900	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000437:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.52;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.52;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.52;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.52;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000437;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000437;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000437:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000438;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286028	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286029	15286096	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286097	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340858	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340859	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000438:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.53;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.53;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.53;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.53;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000438;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000438;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000438:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000439;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335752	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335753	15335906	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335907	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000439:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.54;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.54;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.54;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.54;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000439;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000439;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000439:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000440;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286028	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286029	15286096	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286097	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000440:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.55;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.55;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.55;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.55;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000440;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000440;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000440:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000441;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000441:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.56;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.56;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.56;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.56;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000441;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000441;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000441:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000442;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338997	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338998	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000442:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.57;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.57;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.57;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.57;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000442;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000442;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000442:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000443;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338997	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338998	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000443:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.58;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.58;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.58;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.58;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000443;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000443;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000443:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000444;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15280376	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15280377	15280444	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15280445	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338931	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338932	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15380318	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15380319	15380432	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15380433	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000444:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.59;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.59;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.59;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.59;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000444;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000444;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000444:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000445;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231366	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231367	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15280376	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15280377	15280444	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15280445	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338899	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338900	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000445:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.60;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.60;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.60;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.60;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000445;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000445;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000445:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000446;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285861	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285862	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15380318	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15380319	15380432	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15380433	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000446:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.61;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.61;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.61;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.61;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000446;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000446;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000446:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000447;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15284557	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15284558	15284586	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15284587	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306720	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306721	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338997	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338998	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15384163	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15384164	15384269	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15384270	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000447:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.62;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.62;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.62;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.62;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000447;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000447;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000447:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000448;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15280352	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15280353	15280444	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15280445	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335470	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335471	15335752	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335753	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338997	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338998	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:29;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000448:29;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.63;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.63;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.63;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.63;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000448;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000448;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000448:30;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000449;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338899	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338900	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000449:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.64;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.64;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.64;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.64;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000449;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000449;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000449:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000450;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000450:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.65;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.65;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.65;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.65;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000450;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000450;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000450:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000451;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306720	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306721	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338997	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338998	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15384163	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15384164	15384269	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15384270	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000451:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.66;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.66;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.66;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.66;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000451;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000451;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000451:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000452;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338997	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338998	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000452:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.67;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.67;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.67;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.67;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000452;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000452;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000452:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000453;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231366	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231367	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15280376	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15280377	15280444	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15280445	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000453:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.68;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.68;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.68;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.68;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000453;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000453;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000453:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000454;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231366	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231367	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15380318	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15380319	15380432	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15380433	15384163	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15384164	15384269	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15384270	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000454:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.69;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.69;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.69;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.69;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000454;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000454;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000454:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000455;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231366	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231367	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000455:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.70;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.70;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.70;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.70;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000455;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000455;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000455:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000456;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231366	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231367	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000456:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.71;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.71;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.71;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.71;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000456;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000456;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000456:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000457;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316178	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316179	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000457:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.72;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.72;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.72;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.72;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000457;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000457;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000457:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000458;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231366	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231367	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335163	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335164	15335211	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335212	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000458:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.73;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.73;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.73;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.73;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000458;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000458;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000458:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000459;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303479	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303480	15303746	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15303747	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000459:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.74;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.74;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.74;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.74;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000459;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000459;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000459:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000460;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15280352	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15280353	15280444	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15280445	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000460:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.76;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.76;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.76;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.76;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000460;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000460;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000460:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000461;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15280376	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15280377	15280444	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15280445	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335752	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335753	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15420063	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15420064	15420143	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15420144	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000461:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.77;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.77;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.77;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.77;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000461;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000461;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000461:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000462;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335752	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335753	15335906	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335907	15336015	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336016	15336081	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336082	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338931	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338932	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000462:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.78;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.78;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.78;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.78;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000462;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000462;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000462:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000463;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306720	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306721	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338997	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338998	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000463:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.79;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.79;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.79;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.79;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000463;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000463;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000463:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000464;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349638	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349639	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000464:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.80;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.80;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.80;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.80;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000464;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000464;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000464:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000465;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335163	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335164	15335211	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335212	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338931	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338932	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000465:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.81;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.81;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.81;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.81;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000465;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000465;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000465:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000466;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231366	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231367	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338899	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338900	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000466:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.82;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.82;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.82;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.82;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000466;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000466;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000466:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000467;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349638	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349639	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15384163	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15384164	15384269	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15384270	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000467:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.83;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.83;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.83;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.83;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000467;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000467;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000467:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000468;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000468:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.84;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.84;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.84;transcript_score=299.98199999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.84;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000468;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000468;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000468:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000469;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306720	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306721	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15384163	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15384164	15384269	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15384270	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000469:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.85;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.85;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.85;transcript_score=299.983;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.85;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000469;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000469;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000469:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000470;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286028	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286029	15286096	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286097	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000470:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.86;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.86;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.86;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.86;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000470;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000470;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000470:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000471;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15258616	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15258617	15258721	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15258722	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000471:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.87;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.87;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.87;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.87;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000471;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000471;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000471:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000472;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316178	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316179	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000472:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.88;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.88;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.88;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.88;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000472;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000472;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000472:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000473;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338899	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338900	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000473:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.89;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.89;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.89;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.89;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000473;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000473;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000473:28;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000474;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15384163	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15384164	15384269	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15384270	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000474:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.90;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.90;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.90;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.90;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000474;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000474;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000474:27;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000475;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000475:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.91;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.91;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.91;transcript_score=299.984;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.91;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000475;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000475;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000475:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15228744	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000476;Name=UTY
HG03521_chrY	CAT	exon	15228744	15230247	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15230248	15231381	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15231382	15231552	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15231553	15240642	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15240643	15240769	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15240770	15278083	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15278084	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340321	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340322	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000476:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.92;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.92;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.92;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.92;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000476;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000476;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000476:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15277886	15460387	1000	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000477;Name=UTY
HG03521_chrY	CAT	exon	15277886	15278225	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15278226	15279332	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15279333	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15280352	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15280353	15280444	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15280445	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000477:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15460387	.	-	.	source_transcript=hg002_chrY_paternal_321.106;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.106;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.106;transcript_score=299.977;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.106;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000477;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000477;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000477:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15279466	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000478;Name=UTY
HG03521_chrY	CAT	exon	15279466	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15280352	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15280353	15280444	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15280445	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335163	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335164	15335211	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335212	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338997	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338998	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000478:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.110;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.110;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.110;transcript_score=299.98;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.110;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000478;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000478;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000478:26;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15279502	15461024	1000	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_G0000166;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=HG03521_ch_T0000479;Name=UTY
HG03521_chrY	CAT	exon	15279502	15279520	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15279521	15280352	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:0;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15280353	15280444	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15280445	15283252	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:1;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15283253	15283367	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15283368	15285774	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:2;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15285775	15285923	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15285924	15286413	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:3;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15286414	15286626	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15286627	15303932	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:4;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15303933	15304138	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15304139	15304978	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:5;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15304979	15305084	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15305085	15306598	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:6;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15306599	15306728	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15306729	15315940	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:7;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15315941	15316713	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15316714	15335380	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:8;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15335381	15335776	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15335777	15336300	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:9;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15336301	15336396	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15336397	15338254	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:10;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338255	15338347	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338348	15338841	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:11;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15338842	15338997	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15338998	15339465	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:12;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15339466	15339600	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15339601	15340144	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:13;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340145	15340364	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340365	15340807	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:14;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15340808	15340906	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15340907	15346644	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:15;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15346645	15346771	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15346772	15349633	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:16;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15349634	15349727	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15349728	15374237	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:17;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15374238	15374272	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15374273	15377298	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:18;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15377299	15377353	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15377354	15391369	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:19;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15391370	15391490	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15391491	15395111	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:20;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15395112	15395170	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15395171	15429369	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:21;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15429370	15429419	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15429420	15450474	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:22;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15450475	15450583	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15450584	15459607	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:23;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459608	15459671	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15459672	15459867	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=intron:HG03521_ch_T0000479:24;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15459868	15461024	.	-	.	source_transcript=hg002_chrY_paternal_321.111;source_transcript_name=hg002_chrY_paternal_321.1;source_gene=hg002_chrY_paternal_321;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_321;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_321.111;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_321.111;transcript_score=299.979;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=UTY;alternative_source_transcripts=hg002_chrY_paternal_321.111;AdditionalSources=augTM,liftoff;transcript_id=HG03521_ch_T0000479;gene_id=HG03521_ch_G0000166;Parent=HG03521_ch_T0000479;transcript_name=hg002_chrY_paternal_321.1;gene_name=UTY;ID=exon:HG03521_ch_T0000479:25;Name=UTY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	15459531	15459568	.	+	.	source_gene_common_name=MIR12120;source_gene=hg002_chrY_paternal_323;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;gene_id=HG03521_ch_G0000167;gene_biotype=miRNA;gene_name=MIR12120;gene_sources=liftoff;ID=HG03521_ch_G0000167;Name=MIR12120
HG03521_chrY	CAT	transcript	15459531	15459620	1000	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG03521_ch_T0000480;gene_id=HG03521_ch_G0000167;Parent=HG03521_ch_G0000167;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG03521_ch_T0000480;Name=MIR12120
HG03521_chrY	CAT	exon	15459531	15459620	.	+	.	source_transcript=hg002_chrY_paternal_323.1;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=primary_transcript;alignment_id=hg002_chrY_paternal_323.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.1,hg002_chrY_paternal_323.1;transcript_id=HG03521_ch_T0000480;gene_id=HG03521_ch_G0000167;Parent=HG03521_ch_T0000480;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG03521_ch_T0000480:0;Name=MIR12120;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	15459543	15459568	1000	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG03521_ch_T0000481;gene_id=HG03521_ch_G0000167;Parent=HG03521_ch_G0000167;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=HG03521_ch_T0000481;Name=MIR12120
HG03521_chrY	CAT	exon	15459543	15459568	.	+	.	source_transcript=hg002_chrY_paternal_323.2;source_transcript_name=hg002_chrY_paternal_323.1;source_gene=hg002_chrY_paternal_323;source_gene_biotype=miRNA;original_gene_id=hg002_chrY_paternal_323;gene_biotype=miRNA;transcript_biotype=miRNA;alignment_id=hg002_chrY_paternal_323.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_323.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=MIR12120;alternative_source_transcripts=hg002_chrY_paternal_323.2,hg002_chrY_paternal_323.2;transcript_id=HG03521_ch_T0000481;gene_id=HG03521_ch_G0000167;Parent=HG03521_ch_T0000481;transcript_name=hg002_chrY_paternal_323.1;gene_name=MIR12120;ID=exon:HG03521_ch_T0000481:0;Name=MIR12120;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	15684150	15686275	.	+	.	source_gene_common_name=TMSB4Y;source_gene=hg002_chrY_paternal_324;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;gene_id=HG03521_ch_G0000168;gene_biotype=protein_coding;gene_name=TMSB4Y;gene_sources=liftoff;ID=HG03521_ch_G0000168;Name=TMSB4Y
HG03521_chrY	CAT	transcript	15684150	15686275	100	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03521_ch_T0000482;gene_id=HG03521_ch_G0000168;Parent=HG03521_ch_G0000168;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=HG03521_ch_T0000482;Name=TMSB4Y
HG03521_chrY	CAT	exon	15684150	15684686	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03521_ch_T0000482;gene_id=HG03521_ch_G0000168;Parent=HG03521_ch_T0000482;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG03521_ch_T0000482:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	15684587	15684686	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03521_ch_T0000482;gene_id=HG03521_ch_G0000168;Parent=HG03521_ch_T0000482;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG03521_ch_T0000482:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	15684587	15684589	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03521_ch_T0000482;gene_id=HG03521_ch_G0000168;Parent=HG03521_ch_T0000482;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=start_codon:HG03521_ch_T0000482;Name=TMSB4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15684687	15685475	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03521_ch_T0000482;gene_id=HG03521_ch_G0000168;Parent=HG03521_ch_T0000482;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=intron:HG03521_ch_T0000482:0;Name=TMSB4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15685476	15686275	.	+	.	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03521_ch_T0000482;gene_id=HG03521_ch_G0000168;Parent=HG03521_ch_T0000482;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=exon:HG03521_ch_T0000482:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	15685476	15685510	.	+	2	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03521_ch_T0000482;gene_id=HG03521_ch_G0000168;Parent=HG03521_ch_T0000482;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=CDS:HG03521_ch_T0000482:1;Name=TMSB4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	15685508	15685510	.	+	0	source_transcript=hg002_chrY_paternal_324.1;source_transcript_name=hg002_chrY_paternal_324.1;source_gene=hg002_chrY_paternal_324;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_324;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_324.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_324.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TMSB4Y;alternative_source_transcripts=hg002_chrY_paternal_324.1,hg002_chrY_paternal_324.1;transcript_id=HG03521_ch_T0000482;gene_id=HG03521_ch_G0000168;Parent=HG03521_ch_T0000482;transcript_name=hg002_chrY_paternal_324.1;gene_name=TMSB4Y;ID=stop_codon:HG03521_ch_T0000482;Name=TMSB4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	15966125	15966826	.	-	.	source_gene_common_name=VCY;source_gene=hg002_chrY_paternal_327;alternative_source_transcripts=hg002_chrY_paternal_327.1;gene_id=HG03521_ch_G0000169;gene_biotype=protein_coding;gene_name=VCY;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000169;Name=VCY
HG03521_chrY	CAT	transcript	15966125	15966826	100	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000483;gene_id=HG03521_ch_G0000169;Parent=HG03521_ch_G0000169;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=HG03521_ch_T0000483;Name=VCY
HG03521_chrY	CAT	exon	15966125	15966499	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000483;gene_id=HG03521_ch_G0000169;Parent=HG03521_ch_T0000483;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG03521_ch_T0000483:0;Name=VCY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	15966224	15966499	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000483;gene_id=HG03521_ch_G0000169;Parent=HG03521_ch_T0000483;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG03521_ch_T0000483:0;Name=VCY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	15966224	15966226	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000483;gene_id=HG03521_ch_G0000169;Parent=HG03521_ch_T0000483;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=stop_codon:HG03521_ch_T0000483;Name=VCY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	15966500	15966691	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000483;gene_id=HG03521_ch_G0000169;Parent=HG03521_ch_T0000483;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=intron:HG03521_ch_T0000483:0;Name=VCY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	15966692	15966826	.	-	.	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000483;gene_id=HG03521_ch_G0000169;Parent=HG03521_ch_T0000483;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=exon:HG03521_ch_T0000483:1;Name=VCY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	15966692	15966793	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000483;gene_id=HG03521_ch_G0000169;Parent=HG03521_ch_T0000483;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=CDS:HG03521_ch_T0000483:1;Name=VCY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	15966791	15966793	.	-	0	source_transcript=hg002_chrY_paternal_327.1;source_transcript_name=hg002_chrY_paternal_327.1;source_gene=hg002_chrY_paternal_327;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_327;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_327.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_327.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY;alternative_source_transcripts=hg002_chrY_paternal_327.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000483;gene_id=HG03521_ch_G0000169;Parent=HG03521_ch_T0000483;transcript_name=hg002_chrY_paternal_327.1;gene_name=VCY;ID=start_codon:HG03521_ch_T0000483;Name=VCY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	16036599	16037330	.	+	.	source_gene_common_name=VCY1B;source_gene=hg002_chrY_paternal_328;alternative_source_transcripts=hg002_chrY_paternal_328.1;gene_id=HG03521_ch_G0000170;gene_biotype=protein_coding;gene_name=VCY1B;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000170;Name=VCY1B
HG03521_chrY	CAT	transcript	16036599	16037330	100	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000484;gene_id=HG03521_ch_G0000170;Parent=HG03521_ch_G0000170;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=HG03521_ch_T0000484;Name=VCY1B
HG03521_chrY	CAT	exon	16036599	16036763	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000484;gene_id=HG03521_ch_G0000170;Parent=HG03521_ch_T0000484;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG03521_ch_T0000484:0;Name=VCY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16036662	16036763	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000484;gene_id=HG03521_ch_G0000170;Parent=HG03521_ch_T0000484;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG03521_ch_T0000484:0;Name=VCY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16036662	16036664	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000484;gene_id=HG03521_ch_G0000170;Parent=HG03521_ch_T0000484;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=start_codon:HG03521_ch_T0000484;Name=VCY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16036764	16036955	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000484;gene_id=HG03521_ch_G0000170;Parent=HG03521_ch_T0000484;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=intron:HG03521_ch_T0000484:0;Name=VCY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16036956	16037330	.	+	.	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000484;gene_id=HG03521_ch_G0000170;Parent=HG03521_ch_T0000484;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=exon:HG03521_ch_T0000484:1;Name=VCY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16036956	16037231	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000484;gene_id=HG03521_ch_G0000170;Parent=HG03521_ch_T0000484;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=CDS:HG03521_ch_T0000484:1;Name=VCY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16037229	16037231	.	+	0	source_transcript=hg002_chrY_paternal_328.1;source_transcript_name=hg002_chrY_paternal_328.1;source_gene=hg002_chrY_paternal_328;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_328;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_328.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_328.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VCY1B;alternative_source_transcripts=hg002_chrY_paternal_328.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000484;gene_id=HG03521_ch_G0000170;Parent=HG03521_ch_T0000484;transcript_name=hg002_chrY_paternal_328.1;gene_name=VCY1B;ID=stop_codon:HG03521_ch_T0000484;Name=VCY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	16503063	16826095	.	+	.	source_gene_common_name=NLGN4Y;source_gene=hg002_chrY_paternal_331;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;gene_id=HG03521_ch_G0000171;gene_biotype=protein_coding;gene_name=NLGN4Y;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000171;Name=NLGN4Y
HG03521_chrY	CAT	transcript	16503063	16714034	100	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000485;Name=NLGN4Y
HG03521_chrY	CAT	exon	16503063	16503388	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000485:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16503389	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000485:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000485:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000485:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000485;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000485:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000485:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000485:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000485:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000485:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000485:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16713936	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000485:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16713937	16714034	.	+	.	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000485:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16713937	16714022	.	+	2	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000485:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16714020	16714022	.	+	0	source_transcript=hg002_chrY_paternal_331.1;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.1,hg002_chrY_paternal_331.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000485;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000485;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000485;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16503063	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000486;Name=NLGN4Y
HG03521_chrY	CAT	exon	16503063	16503388	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000486:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16503389	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000486:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000486:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000486:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000486:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703632	16703752	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000486:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16703632	16703634	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000486;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000486:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000486:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000486:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000486:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000486:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000486:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000486:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000486:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000486:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.2;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.2,hg002_chrY_paternal_331.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000486;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000486;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000486;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16503063	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000487;Name=NLGN4Y
HG03521_chrY	CAT	exon	16503063	16503388	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000487:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16503389	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000487:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000487:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000487:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000487;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000487:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000487:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000487:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000487:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000487:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000487:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000487:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000487:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000487:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000487:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000487:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000487:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000487:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000487:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000487:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.3;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.3,hg002_chrY_paternal_331.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000487;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000487;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000487;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16503063	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000488;Name=NLGN4Y
HG03521_chrY	CAT	exon	16503063	16503388	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000488:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16503389	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000488:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000488:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000488:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000488;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000488:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000488:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000488:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000488:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000488:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000488:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000488:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000488:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000488:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000488:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000488:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000488:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.4;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.4,hg002_chrY_paternal_331.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000488;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000488;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000488;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16503063	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000489;Name=NLGN4Y
HG03521_chrY	CAT	exon	16503063	16504019	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000489:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16504020	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000489:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000489:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000489:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000489;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000489:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000489:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000489:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000489:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000489:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000489:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000489:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000489:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000489:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000489:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000489:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000489:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000489:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000489:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000489:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.5;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.5,hg002_chrY_paternal_331.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000489;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000489;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000489;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504193	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000490;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504193	16504345	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16504346	16602478	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602479	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000490:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000490;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000490:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000490:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000490:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000490:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000490:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000490:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000490:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.6;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.6,hg002_chrY_paternal_331.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000490;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000490;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000490;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504419	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000491;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504419	16504731	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16504732	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000491:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000491;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000491:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000491:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000491:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000491:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000491:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000491:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000491:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000491:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.7;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.7,hg002_chrY_paternal_331.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000491;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000491;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000491;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504419	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000492;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504419	16504731	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16504732	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000492:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000492;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000492:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000492:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000492:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000492:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000492:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.8;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.8,hg002_chrY_paternal_331.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000492;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000492;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000492;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16714034	100	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000493;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505383	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505384	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000493:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000493;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000493:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000493:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16713936	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16713937	16714034	.	+	.	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000493:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16713937	16714022	.	+	2	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000493:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16714020	16714022	.	+	0	source_transcript=hg002_chrY_paternal_331.10;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.10,hg002_chrY_paternal_331.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000493;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000493;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000493;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000494;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505383	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505384	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000494:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000494;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000494:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000494:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000494:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000494:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000494:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000494:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000494:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000494:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000494:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000494:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.11;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.11,hg002_chrY_paternal_331.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000494;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000494;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000494;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000495;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505155	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505156	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000495:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000495;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000495:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000495:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000495:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000495:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000495:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000495:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000495:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000495:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000495:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000495:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.12;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.12,hg002_chrY_paternal_331.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000495;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000495;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000495;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000496;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505383	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505384	16564632	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16564633	16564734	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16564735	16568068	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16568069	16568173	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16568174	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000496:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000496;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000496:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000496:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000496:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000496:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000496:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000496:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000496:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000496:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.13;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.13,hg002_chrY_paternal_331.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000496;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000496;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000496;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000497;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505155	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505156	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000497:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000497;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000497:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000497:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000497:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000497:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000497:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.14;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.14,hg002_chrY_paternal_331.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000497;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000497;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000497;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000498;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505004	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505005	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000498:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000498;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000498:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000498:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000498:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000498:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000498:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000498:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000498:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.15;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.15;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.15;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.15,hg002_chrY_paternal_331.15;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000498;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000498;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000498;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000499;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505383	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505384	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000499:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000499;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000499:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000499:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000499:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000499:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000499:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.16;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.16;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.16;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.16,hg002_chrY_paternal_331.16;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000499;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000499;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000499;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000500;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505383	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505384	16541039	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16541040	16541119	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16541120	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000500:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000500;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000500:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000500:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000500:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000500:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000500:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000500:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000500:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000500:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000500:7;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000500:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.17;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.17;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.17;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.17,hg002_chrY_paternal_331.17;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000500;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000500;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000500;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000501;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505004	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505005	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000501:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000501;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000501:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000501:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000501:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000501:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000501:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000501:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000501:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000501:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.18;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.18;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.18;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.18,hg002_chrY_paternal_331.18;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000501;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000501;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000501;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000502;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505383	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505384	16541039	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16541040	16541119	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16541120	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000502:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000502;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000502:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000502:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000502:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000502:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000502:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000502:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000502:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.19;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.19;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.19;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.19,hg002_chrY_paternal_331.19;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000502;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000502;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000502;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16504976	16714034	100	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000503;Name=NLGN4Y
HG03521_chrY	CAT	exon	16504976	16505155	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16505156	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000503:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000503;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000503:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000503:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16713936	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16713937	16714034	.	+	.	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000503:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16713937	16714022	.	+	2	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000503:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16714020	16714022	.	+	0	source_transcript=hg002_chrY_paternal_331.9;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.9,hg002_chrY_paternal_331.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000503;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000503;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000503;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16534181	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000504;Name=NLGN4Y
HG03521_chrY	CAT	exon	16534181	16541119	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16541120	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000504:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000504;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000504:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000504:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000504:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000504:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000504:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000504:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000504:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000504:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000504:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000504:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.20;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.20;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.20;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.20,hg002_chrY_paternal_331.20;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000504;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000504;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000504;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16563048	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000505;Name=NLGN4Y
HG03521_chrY	CAT	exon	16563048	16564750	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16564751	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000505:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000505;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000505:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000505:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000505:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000505:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000505:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000505:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000505:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000505:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000505:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000505:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.21;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.21;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.21;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.21,hg002_chrY_paternal_331.21;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000505;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000505;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000505;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16563048	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000506;Name=NLGN4Y
HG03521_chrY	CAT	exon	16563048	16564750	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16564751	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000506:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000506;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000506:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000506:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000506:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000506:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000506:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.22;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.22;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.22;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.22,hg002_chrY_paternal_331.22;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000506;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000506;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000506;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16568069	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000507;Name=NLGN4Y
HG03521_chrY	CAT	exon	16568069	16568173	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16568174	16602466	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000507:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000507;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000507:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000507:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000507:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000507:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000507:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000507:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000507:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000507:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.23;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.23;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.23;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.23,hg002_chrY_paternal_331.23;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000507;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000507;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000507;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16602467	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000508;Name=NLGN4Y
HG03521_chrY	CAT	exon	16602467	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16681510	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16681511	16681604	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16681568	16681604	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000508:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16681568	16681570	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000508;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16681605	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000508:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000508:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000508:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000508:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000508:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000508:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000508:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000508:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000508:6;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000508:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.24;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.24;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.24;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.24,hg002_chrY_paternal_331.24;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000508;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000508;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000508;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16602479	16714034	100	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000509;Name=NLGN4Y
HG03521_chrY	CAT	exon	16602479	16603049	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16602578	16603049	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16602578	16602580	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000509;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16603050	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000509:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16699932	16699991	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000509:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703600	16703752	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16713936	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000509:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16713937	16714034	.	+	.	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16713937	16714022	.	+	2	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000509:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16714020	16714022	.	+	0	source_transcript=hg002_chrY_paternal_331.25;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.25;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.25;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.25,hg002_chrY_paternal_331.25;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000509;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000509;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000509;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	16685259	16826095	100	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_G0000171;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=HG03521_ch_T0000510;Name=NLGN4Y
HG03521_chrY	CAT	exon	16685259	16685279	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16685280	16699931	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16699932	16699991	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16699992	16703599	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16703600	16703752	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16703632	16703752	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000510:0;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	16703632	16703634	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=start_codon:HG03521_ch_T0000510;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16703753	16804627	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16804628	16804813	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16804628	16804813	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000510:1;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16804814	16810169	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16810170	16810959	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000510:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16810170	16810959	.	+	2	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000510:2;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16810960	16820853	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=intron:HG03521_ch_T0000510:4;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16820854	16826095	.	+	.	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=exon:HG03521_ch_T0000510:5;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	16820854	16821703	.	+	1	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=CDS:HG03521_ch_T0000510:3;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	16821701	16821703	.	+	0	source_transcript=hg002_chrY_paternal_331.26;source_transcript_name=hg002_chrY_paternal_331.26;source_gene=hg002_chrY_paternal_331;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_331;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_331.26;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_331.26;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y;alternative_source_transcripts=hg002_chrY_paternal_331.26,hg002_chrY_paternal_331.26;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000510;gene_id=HG03521_ch_G0000171;Parent=HG03521_ch_T0000510;transcript_name=hg002_chrY_paternal_331.26;gene_name=NLGN4Y;ID=stop_codon:HG03521_ch_T0000510;Name=NLGN4Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	16774126	16784473	.	-	.	source_gene_common_name=NLGN4Y-AS1;source_gene=hg002_chrY_paternal_333;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;gene_id=HG03521_ch_G0000172;gene_biotype=lncRNA;gene_name=NLGN4Y-AS1;gene_sources=liftoff;ID=HG03521_ch_G0000172;Name=NLGN4Y-AS1
HG03521_chrY	CAT	transcript	16774126	16784473	1000	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03521_ch_T0000511;gene_id=HG03521_ch_G0000172;Parent=HG03521_ch_G0000172;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=HG03521_ch_T0000511;Name=NLGN4Y-AS1
HG03521_chrY	CAT	exon	16774126	16774471	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03521_ch_T0000511;gene_id=HG03521_ch_G0000172;Parent=HG03521_ch_T0000511;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03521_ch_T0000511:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16774472	16779105	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03521_ch_T0000511;gene_id=HG03521_ch_G0000172;Parent=HG03521_ch_T0000511;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG03521_ch_T0000511:0;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16779106	16779193	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03521_ch_T0000511;gene_id=HG03521_ch_G0000172;Parent=HG03521_ch_T0000511;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03521_ch_T0000511:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16779194	16781759	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03521_ch_T0000511;gene_id=HG03521_ch_G0000172;Parent=HG03521_ch_T0000511;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG03521_ch_T0000511:1;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16781760	16781828	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03521_ch_T0000511;gene_id=HG03521_ch_G0000172;Parent=HG03521_ch_T0000511;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03521_ch_T0000511:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	16781829	16784444	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03521_ch_T0000511;gene_id=HG03521_ch_G0000172;Parent=HG03521_ch_T0000511;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=intron:HG03521_ch_T0000511:2;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	16784445	16784473	.	-	.	source_transcript=hg002_chrY_paternal_333.1;source_transcript_name=hg002_chrY_paternal_333.1;source_gene=hg002_chrY_paternal_333;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_333;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_333.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_333.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=NLGN4Y-AS1;alternative_source_transcripts=hg002_chrY_paternal_333.1,hg002_chrY_paternal_333.1;transcript_id=HG03521_ch_T0000511;gene_id=HG03521_ch_G0000172;Parent=HG03521_ch_T0000511;transcript_name=hg002_chrY_paternal_333.1;gene_name=NLGN4Y-AS1;ID=exon:HG03521_ch_T0000511:3;Name=NLGN4Y-AS1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	17227484	17345489	.	-	.	source_gene_common_name=LOC107987355;source_gene=hg002_chrY_paternal_336;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;gene_id=HG03521_ch_G0000173;gene_biotype=lncRNA;gene_name=LOC107987355;gene_sources=liftoff;ID=HG03521_ch_G0000173;Name=LOC107987355
HG03521_chrY	CAT	transcript	17227484	17345489	1000	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03521_ch_T0000512;gene_id=HG03521_ch_G0000173;Parent=HG03521_ch_G0000173;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=HG03521_ch_T0000512;Name=LOC107987355
HG03521_chrY	CAT	exon	17227484	17227556	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03521_ch_T0000512;gene_id=HG03521_ch_G0000173;Parent=HG03521_ch_T0000512;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG03521_ch_T0000512:0;Name=LOC107987355;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	17227557	17329014	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03521_ch_T0000512;gene_id=HG03521_ch_G0000173;Parent=HG03521_ch_T0000512;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG03521_ch_T0000512:0;Name=LOC107987355;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	17329015	17329237	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03521_ch_T0000512;gene_id=HG03521_ch_G0000173;Parent=HG03521_ch_T0000512;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG03521_ch_T0000512:1;Name=LOC107987355;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	17329238	17345403	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03521_ch_T0000512;gene_id=HG03521_ch_G0000173;Parent=HG03521_ch_T0000512;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=intron:HG03521_ch_T0000512:1;Name=LOC107987355;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	17345404	17345489	.	-	.	source_transcript=hg002_chrY_paternal_336.1;source_transcript_name=hg002_chrY_paternal_336.1;source_gene=hg002_chrY_paternal_336;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_336;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_336.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_336.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987355;alternative_source_transcripts=hg002_chrY_paternal_336.1,hg002_chrY_paternal_336.1;transcript_id=HG03521_ch_T0000512;gene_id=HG03521_ch_G0000173;Parent=HG03521_ch_T0000512;transcript_name=hg002_chrY_paternal_336.1;gene_name=LOC107987355;ID=exon:HG03521_ch_T0000512:2;Name=LOC107987355;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	18118737	18118868	.	-	.	source_gene_common_name=LOC124900508;source_gene=hg002_chrY_paternal_339;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;gene_id=HG03521_ch_G0000174;gene_biotype=snoRNA;gene_name=LOC124900508;gene_sources=liftoff;ID=HG03521_ch_G0000174;Name=LOC124900508
HG03521_chrY	CAT	transcript	18118737	18118868	1000	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG03521_ch_T0000513;gene_id=HG03521_ch_G0000174;Parent=HG03521_ch_G0000174;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=HG03521_ch_T0000513;Name=LOC124900508
HG03521_chrY	CAT	exon	18118737	18118868	.	-	.	source_transcript=hg002_chrY_paternal_339.1;source_transcript_name=hg002_chrY_paternal_339.1;source_gene=hg002_chrY_paternal_339;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_339;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_339.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_339.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900508;alternative_source_transcripts=hg002_chrY_paternal_339.1,hg002_chrY_paternal_339.1;transcript_id=HG03521_ch_T0000513;gene_id=HG03521_ch_G0000174;Parent=HG03521_ch_T0000513;transcript_name=hg002_chrY_paternal_339.1;gene_name=LOC124900508;ID=exon:HG03521_ch_T0000513:0;Name=LOC124900508;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	19481492	19497270	.	+	.	source_gene_common_name=FAM41AY2;source_gene=hg002_chrY_paternal_344;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;gene_id=HG03521_ch_G0000175;gene_biotype=lncRNA;gene_name=FAM41AY2;gene_sources=liftoff;ID=HG03521_ch_G0000175;Name=FAM41AY2
HG03521_chrY	CAT	transcript	19481492	19497270	1000	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_G0000175;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=HG03521_ch_T0000514;Name=FAM41AY2
HG03521_chrY	CAT	exon	19481492	19481649	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03521_ch_T0000514:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19481650	19482244	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03521_ch_T0000514:0;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19482245	19482294	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03521_ch_T0000514:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19482295	19493625	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03521_ch_T0000514:1;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19493626	19493754	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03521_ch_T0000514:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19493755	19494001	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03521_ch_T0000514:2;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19494002	19494095	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03521_ch_T0000514:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19494096	19494688	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03521_ch_T0000514:3;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19494689	19494859	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03521_ch_T0000514:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19494860	19494968	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03521_ch_T0000514:4;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19494969	19495062	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03521_ch_T0000514:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19495063	19495336	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03521_ch_T0000514:5;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19495337	19495546	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03521_ch_T0000514:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19495547	19495839	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03521_ch_T0000514:6;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19495840	19496027	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03521_ch_T0000514:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19496028	19496239	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03521_ch_T0000514:7;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19496240	19496461	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03521_ch_T0000514:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19496462	19496543	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=intron:HG03521_ch_T0000514:8;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19496544	19497270	.	+	.	source_transcript=hg002_chrY_paternal_344.1;source_transcript_name=hg002_chrY_paternal_344.1;source_gene=hg002_chrY_paternal_344;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_344;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_344.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_344.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY2;alternative_source_transcripts=hg002_chrY_paternal_344.1,hg002_chrY_paternal_344.1;transcript_id=HG03521_ch_T0000514;gene_id=HG03521_ch_G0000175;Parent=HG03521_ch_T0000514;transcript_name=hg002_chrY_paternal_344.1;gene_name=FAM41AY2;ID=exon:HG03521_ch_T0000514:9;Name=FAM41AY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	19534674	19539364	.	-	.	source_gene_common_name=LOC105377220;source_gene=hg002_chrY_paternal_391;gene_id=HG03521_ch_G0000176;gene_biotype=lncRNA;gene_name=LOC105377220;gene_sources=liftoff;ID=HG03521_ch_G0000176;Name=LOC105377220
HG03521_chrY	CAT	transcript	19534674	19539364	1000	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03521_ch_T0000515;gene_id=HG03521_ch_G0000176;Parent=HG03521_ch_G0000176;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=HG03521_ch_T0000515;Name=LOC105377220
HG03521_chrY	CAT	exon	19534674	19536540	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03521_ch_T0000515;gene_id=HG03521_ch_G0000176;Parent=HG03521_ch_T0000515;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG03521_ch_T0000515:0;Name=LOC105377220;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19536541	19537250	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03521_ch_T0000515;gene_id=HG03521_ch_G0000176;Parent=HG03521_ch_T0000515;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG03521_ch_T0000515:0;Name=LOC105377220;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19537251	19537379	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03521_ch_T0000515;gene_id=HG03521_ch_G0000176;Parent=HG03521_ch_T0000515;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG03521_ch_T0000515:1;Name=LOC105377220;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19537380	19538589	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03521_ch_T0000515;gene_id=HG03521_ch_G0000176;Parent=HG03521_ch_T0000515;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=intron:HG03521_ch_T0000515:1;Name=LOC105377220;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19538590	19539364	.	-	.	source_transcript=hg002_chrY_paternal_391.1;source_transcript_name=hg002_chrY_paternal_391.1;source_gene=hg002_chrY_paternal_391;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_391;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_391.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_391.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377220;transcript_id=HG03521_ch_T0000515;gene_id=HG03521_ch_G0000176;Parent=HG03521_ch_T0000515;transcript_name=hg002_chrY_paternal_391.1;gene_name=LOC105377220;ID=exon:HG03521_ch_T0000515:2;Name=LOC105377220;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	19555682	19559988	.	-	.	source_gene_common_name=FAM224B;source_gene=hg002_chrY_paternal_389;gene_id=HG03521_ch_G0000177;gene_biotype=lncRNA;gene_name=FAM224B;gene_sources=liftoff;ID=HG03521_ch_G0000177;Name=FAM224B
HG03521_chrY	CAT	transcript	19555682	19559988	1000	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=HG03521_ch_T0000516;gene_id=HG03521_ch_G0000177;Parent=HG03521_ch_G0000177;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=HG03521_ch_T0000516;Name=FAM224B
HG03521_chrY	CAT	exon	19555682	19555888	.	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=HG03521_ch_T0000516;gene_id=HG03521_ch_G0000177;Parent=HG03521_ch_T0000516;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG03521_ch_T0000516:0;Name=FAM224B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19555889	19557223	.	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=HG03521_ch_T0000516;gene_id=HG03521_ch_G0000177;Parent=HG03521_ch_T0000516;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG03521_ch_T0000516:0;Name=FAM224B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19557224	19557341	.	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=HG03521_ch_T0000516;gene_id=HG03521_ch_G0000177;Parent=HG03521_ch_T0000516;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG03521_ch_T0000516:1;Name=FAM224B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19557342	19559851	.	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=HG03521_ch_T0000516;gene_id=HG03521_ch_G0000177;Parent=HG03521_ch_T0000516;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=intron:HG03521_ch_T0000516:1;Name=FAM224B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19559852	19559988	.	-	.	source_transcript=hg002_chrY_paternal_389.1;source_transcript_name=hg002_chrY_paternal_389.1;source_gene=hg002_chrY_paternal_389;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_389;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_389.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_389.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224B;transcript_id=HG03521_ch_T0000516;gene_id=HG03521_ch_G0000177;Parent=HG03521_ch_T0000516;transcript_name=hg002_chrY_paternal_389.1;gene_name=FAM224B;ID=exon:HG03521_ch_T0000516:2;Name=FAM224B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	19669027	19669827	.	-	.	source_gene_common_name=LOC105377219;source_gene=hg002_chrY_paternal_352;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;gene_id=HG03521_ch_G0000178;gene_biotype=lncRNA;gene_name=LOC105377219;gene_sources=liftoff;ID=HG03521_ch_G0000178;Name=LOC105377219
HG03521_chrY	CAT	transcript	19669027	19669827	1000	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03521_ch_T0000517;gene_id=HG03521_ch_G0000178;Parent=HG03521_ch_G0000178;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=HG03521_ch_T0000517;Name=LOC105377219
HG03521_chrY	CAT	exon	19669027	19669483	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03521_ch_T0000517;gene_id=HG03521_ch_G0000178;Parent=HG03521_ch_T0000517;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG03521_ch_T0000517:0;Name=LOC105377219;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19669484	19669571	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03521_ch_T0000517;gene_id=HG03521_ch_G0000178;Parent=HG03521_ch_T0000517;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG03521_ch_T0000517:0;Name=LOC105377219;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19669572	19669657	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03521_ch_T0000517;gene_id=HG03521_ch_G0000178;Parent=HG03521_ch_T0000517;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG03521_ch_T0000517:1;Name=LOC105377219;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19669658	19669744	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03521_ch_T0000517;gene_id=HG03521_ch_G0000178;Parent=HG03521_ch_T0000517;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=intron:HG03521_ch_T0000517:1;Name=LOC105377219;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19669745	19669827	.	-	.	source_transcript=hg002_chrY_paternal_352.1;source_transcript_name=hg002_chrY_paternal_352.1;source_gene=hg002_chrY_paternal_352;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_352;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_352.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_352.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377219;alternative_source_transcripts=hg002_chrY_paternal_352.1,hg002_chrY_paternal_352.1;transcript_id=HG03521_ch_T0000517;gene_id=HG03521_ch_G0000178;Parent=HG03521_ch_T0000517;transcript_name=hg002_chrY_paternal_352.1;gene_name=LOC105377219;ID=exon:HG03521_ch_T0000517:2;Name=LOC105377219;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	19673445	19680306	.	-	.	source_gene_common_name=LOC124905303;source_gene=hg002_chrY_paternal_353;alternative_source_transcripts=hg002_chrY_paternal_353.1;gene_id=HG03521_ch_G0000179;gene_biotype=lncRNA;gene_name=LOC124905303;gene_sources=liftoff,transMap;ID=HG03521_ch_G0000179;Name=LOC124905303
HG03521_chrY	CAT	transcript	19673445	19680306	1000	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000518;gene_id=HG03521_ch_G0000179;Parent=HG03521_ch_G0000179;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=HG03521_ch_T0000518;Name=LOC124905303
HG03521_chrY	CAT	exon	19673445	19677389	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000518;gene_id=HG03521_ch_G0000179;Parent=HG03521_ch_T0000518;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG03521_ch_T0000518:0;Name=LOC124905303;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19677390	19677477	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000518;gene_id=HG03521_ch_G0000179;Parent=HG03521_ch_T0000518;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG03521_ch_T0000518:0;Name=LOC124905303;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19677478	19678226	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000518;gene_id=HG03521_ch_G0000179;Parent=HG03521_ch_T0000518;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG03521_ch_T0000518:1;Name=LOC124905303;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	19678227	19678313	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000518;gene_id=HG03521_ch_G0000179;Parent=HG03521_ch_T0000518;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=intron:HG03521_ch_T0000518:1;Name=LOC124905303;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	19678314	19680306	.	-	.	source_transcript=hg002_chrY_paternal_353.1;source_transcript_name=hg002_chrY_paternal_353.1;source_gene=hg002_chrY_paternal_353;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_353;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_353.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_353.1;transcript_score=299.985;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905303;alternative_source_transcripts=hg002_chrY_paternal_353.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000518;gene_id=HG03521_ch_G0000179;Parent=HG03521_ch_T0000518;transcript_name=hg002_chrY_paternal_353.1;gene_name=LOC124905303;ID=exon:HG03521_ch_T0000518:2;Name=LOC124905303;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	19749497	19751077	.	-	.	source_gene_common_name=XKRY2;source_gene=hg002_chrY_paternal_380;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;gene_id=HG03521_ch_G0000180;gene_biotype=transcribed_pseudogene;gene_name=XKRY2;gene_sources=liftoff;ID=HG03521_ch_G0000180;Name=XKRY2
HG03521_chrY	CAT	transcript	19749497	19751077	1000	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;transcript_id=HG03521_ch_T0000519;gene_id=HG03521_ch_G0000180;Parent=HG03521_ch_G0000180;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=HG03521_ch_T0000519;Name=XKRY2
HG03521_chrY	CAT	exon	19749497	19751077	.	-	.	source_transcript=hg002_chrY_paternal_380.1;source_transcript_name=hg002_chrY_paternal_380.1;source_gene=hg002_chrY_paternal_380;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_380;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_380.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_380.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY2;alternative_source_transcripts=hg002_chrY_paternal_358.1,hg002_chrY_paternal_358.1;transcript_id=HG03521_ch_T0000519;gene_id=HG03521_ch_G0000180;Parent=HG03521_ch_T0000519;transcript_name=hg002_chrY_paternal_380.1;gene_name=XKRY2;ID=exon:HG03521_ch_T0000519:0;Name=XKRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	19858772	19860731	.	-	.	source_gene_common_name=CDY2A;source_gene=hg002_chrY_paternal_365;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;gene_id=HG03521_ch_G0000181;gene_biotype=protein_coding;gene_name=CDY2A;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000181;Name=CDY2A
HG03521_chrY	CAT	transcript	19858772	19860731	100	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000520;gene_id=HG03521_ch_G0000181;Parent=HG03521_ch_G0000181;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=HG03521_ch_T0000520;Name=CDY2A
HG03521_chrY	CAT	exon	19858772	19860731	.	-	.	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000520;gene_id=HG03521_ch_G0000181;Parent=HG03521_ch_T0000520;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=exon:HG03521_ch_T0000520:0;Name=CDY2A;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	19858778	19860403	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000520;gene_id=HG03521_ch_G0000181;Parent=HG03521_ch_T0000520;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=CDS:HG03521_ch_T0000520:0;Name=CDY2A;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	19858778	19858780	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000520;gene_id=HG03521_ch_G0000181;Parent=HG03521_ch_T0000520;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=stop_codon:HG03521_ch_T0000520;Name=CDY2A;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	19860401	19860403	.	-	0	source_transcript=hg002_chrY_paternal_365.1;source_transcript_name=hg002_chrY_paternal_365.1;source_gene=hg002_chrY_paternal_365;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_365;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_365.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_365.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2A;alternative_source_transcripts=hg002_chrY_paternal_365.1,hg002_chrY_paternal_365.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000520;gene_id=HG03521_ch_G0000181;Parent=HG03521_ch_T0000520;transcript_name=hg002_chrY_paternal_365.1;gene_name=CDY2A;ID=start_codon:HG03521_ch_T0000520;Name=CDY2A;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20006330	20008290	.	+	.	source_gene_common_name=CDY2B;source_gene=hg002_chrY_paternal_373;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;gene_id=HG03521_ch_G0000182;gene_biotype=protein_coding;gene_name=CDY2B;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000182;Name=CDY2B
HG03521_chrY	CAT	transcript	20006330	20008290	100	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000521;gene_id=HG03521_ch_G0000182;Parent=HG03521_ch_G0000182;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=HG03521_ch_T0000521;Name=CDY2B
HG03521_chrY	CAT	exon	20006330	20008290	.	+	.	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000521;gene_id=HG03521_ch_G0000182;Parent=HG03521_ch_T0000521;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=exon:HG03521_ch_T0000521:0;Name=CDY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20006658	20008283	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000521;gene_id=HG03521_ch_G0000182;Parent=HG03521_ch_T0000521;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=CDS:HG03521_ch_T0000521:0;Name=CDY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	20006658	20006660	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000521;gene_id=HG03521_ch_G0000182;Parent=HG03521_ch_T0000521;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=start_codon:HG03521_ch_T0000521;Name=CDY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	20008281	20008283	.	+	0	source_transcript=hg002_chrY_paternal_373.1;source_transcript_name=hg002_chrY_paternal_373.1;source_gene=hg002_chrY_paternal_373;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_373;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_373.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_373.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY2B;alternative_source_transcripts=hg002_chrY_paternal_373.1,hg002_chrY_paternal_373.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000521;gene_id=HG03521_ch_G0000182;Parent=HG03521_ch_T0000521;transcript_name=hg002_chrY_paternal_373.1;gene_name=CDY2B;ID=stop_codon:HG03521_ch_T0000521;Name=CDY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20116010	20117590	.	+	.	source_gene_common_name=XKRY;source_gene=hg002_chrY_paternal_358;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;gene_id=HG03521_ch_G0000183;gene_biotype=transcribed_pseudogene;gene_name=XKRY;gene_sources=liftoff;ID=HG03521_ch_G0000183;Name=XKRY
HG03521_chrY	CAT	transcript	20116010	20117590	1000	+	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;transcript_id=HG03521_ch_T0000522;gene_id=HG03521_ch_G0000183;Parent=HG03521_ch_G0000183;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=HG03521_ch_T0000522;Name=XKRY
HG03521_chrY	CAT	exon	20116010	20117590	.	+	.	source_transcript=hg002_chrY_paternal_358.1;source_transcript_name=hg002_chrY_paternal_358.1;source_gene=hg002_chrY_paternal_358;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_358;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_358.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_358.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=XKRY;alternative_source_transcripts=hg002_chrY_paternal_380.1,hg002_chrY_paternal_380.1;transcript_id=HG03521_ch_T0000522;gene_id=HG03521_ch_G0000183;Parent=HG03521_ch_T0000522;transcript_name=hg002_chrY_paternal_358.1;gene_name=XKRY;ID=exon:HG03521_ch_T0000522:0;Name=XKRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20186778	20193637	.	+	.	source_gene_common_name=LOC124905302;source_gene=hg002_chrY_paternal_385;alternative_source_transcripts=hg002_chrY_paternal_385.1;gene_id=HG03521_ch_G0000184;gene_biotype=lncRNA;gene_name=LOC124905302;gene_sources=liftoff,transMap;ID=HG03521_ch_G0000184;Name=LOC124905302
HG03521_chrY	CAT	transcript	20186778	20193637	1000	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=299.97;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000523;gene_id=HG03521_ch_G0000184;Parent=HG03521_ch_G0000184;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=HG03521_ch_T0000523;Name=LOC124905302
HG03521_chrY	CAT	exon	20186778	20188768	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000523;gene_id=HG03521_ch_G0000184;Parent=HG03521_ch_T0000523;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG03521_ch_T0000523:0;Name=LOC124905302;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20188769	20188855	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000523;gene_id=HG03521_ch_G0000184;Parent=HG03521_ch_T0000523;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG03521_ch_T0000523:0;Name=LOC124905302;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20188856	20189604	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000523;gene_id=HG03521_ch_G0000184;Parent=HG03521_ch_T0000523;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG03521_ch_T0000523:1;Name=LOC124905302;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20189605	20189692	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000523;gene_id=HG03521_ch_G0000184;Parent=HG03521_ch_T0000523;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=intron:HG03521_ch_T0000523:1;Name=LOC124905302;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20189693	20193637	.	+	.	source_transcript=hg002_chrY_paternal_385.1;source_transcript_name=hg002_chrY_paternal_385.1;source_gene=hg002_chrY_paternal_385;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_385;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_385.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_385.1;transcript_score=299.97;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905302;alternative_source_transcripts=hg002_chrY_paternal_385.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000523;gene_id=HG03521_ch_G0000184;Parent=HG03521_ch_T0000523;transcript_name=hg002_chrY_paternal_385.1;gene_name=LOC124905302;ID=exon:HG03521_ch_T0000523:2;Name=LOC124905302;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20197255	20198055	.	+	.	source_gene_common_name=LOC105377218;source_gene=hg002_chrY_paternal_386;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;gene_id=HG03521_ch_G0000185;gene_biotype=lncRNA;gene_name=LOC105377218;gene_sources=liftoff;ID=HG03521_ch_G0000185;Name=LOC105377218
HG03521_chrY	CAT	transcript	20197255	20198055	1000	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03521_ch_T0000524;gene_id=HG03521_ch_G0000185;Parent=HG03521_ch_G0000185;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=HG03521_ch_T0000524;Name=LOC105377218
HG03521_chrY	CAT	exon	20197255	20197337	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03521_ch_T0000524;gene_id=HG03521_ch_G0000185;Parent=HG03521_ch_T0000524;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG03521_ch_T0000524:0;Name=LOC105377218;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20197338	20197424	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03521_ch_T0000524;gene_id=HG03521_ch_G0000185;Parent=HG03521_ch_T0000524;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG03521_ch_T0000524:0;Name=LOC105377218;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20197425	20197510	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03521_ch_T0000524;gene_id=HG03521_ch_G0000185;Parent=HG03521_ch_T0000524;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG03521_ch_T0000524:1;Name=LOC105377218;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20197511	20197598	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03521_ch_T0000524;gene_id=HG03521_ch_G0000185;Parent=HG03521_ch_T0000524;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=intron:HG03521_ch_T0000524:1;Name=LOC105377218;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20197599	20198055	.	+	.	source_transcript=hg002_chrY_paternal_386.1;source_transcript_name=hg002_chrY_paternal_386.1;source_gene=hg002_chrY_paternal_386;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_386;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_386.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_386.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377218;alternative_source_transcripts=hg002_chrY_paternal_386.1,hg002_chrY_paternal_386.1;transcript_id=HG03521_ch_T0000524;gene_id=HG03521_ch_G0000185;Parent=HG03521_ch_T0000524;transcript_name=hg002_chrY_paternal_386.1;gene_name=LOC105377218;ID=exon:HG03521_ch_T0000524:2;Name=LOC105377218;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20307078	20311377	.	+	.	source_gene_common_name=FAM224A;source_gene=hg002_chrY_paternal_349;gene_id=HG03521_ch_G0000186;gene_biotype=lncRNA;gene_name=FAM224A;gene_sources=liftoff;ID=HG03521_ch_G0000186;Name=FAM224A
HG03521_chrY	CAT	transcript	20307078	20311377	1000	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=HG03521_ch_T0000525;gene_id=HG03521_ch_G0000186;Parent=HG03521_ch_G0000186;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=HG03521_ch_T0000525;Name=FAM224A
HG03521_chrY	CAT	exon	20307078	20307235	.	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=HG03521_ch_T0000525;gene_id=HG03521_ch_G0000186;Parent=HG03521_ch_T0000525;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG03521_ch_T0000525:0;Name=FAM224A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20307236	20309740	.	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=HG03521_ch_T0000525;gene_id=HG03521_ch_G0000186;Parent=HG03521_ch_T0000525;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG03521_ch_T0000525:0;Name=FAM224A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20309741	20309858	.	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=HG03521_ch_T0000525;gene_id=HG03521_ch_G0000186;Parent=HG03521_ch_T0000525;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG03521_ch_T0000525:1;Name=FAM224A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20309859	20311193	.	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=HG03521_ch_T0000525;gene_id=HG03521_ch_G0000186;Parent=HG03521_ch_T0000525;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=intron:HG03521_ch_T0000525:1;Name=FAM224A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20311194	20311377	.	+	.	source_transcript=hg002_chrY_paternal_349.1;source_transcript_name=hg002_chrY_paternal_349.1;source_gene=hg002_chrY_paternal_349;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_349;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_349.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_349.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM224A;transcript_id=HG03521_ch_T0000525;gene_id=HG03521_ch_G0000186;Parent=HG03521_ch_T0000525;transcript_name=hg002_chrY_paternal_349.1;gene_name=FAM224A;ID=exon:HG03521_ch_T0000525:2;Name=FAM224A;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20323151	20332408	.	+	.	source_gene_common_name=LOC105377217;source_gene=hg002_chrY_paternal_346;gene_id=HG03521_ch_G0000187;gene_biotype=lncRNA;gene_name=LOC105377217;gene_sources=liftoff;ID=HG03521_ch_G0000187;Name=LOC105377217
HG03521_chrY	CAT	transcript	20323151	20332408	1000	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03521_ch_T0000526;gene_id=HG03521_ch_G0000187;Parent=HG03521_ch_G0000187;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=HG03521_ch_T0000526;Name=LOC105377217
HG03521_chrY	CAT	exon	20323151	20328492	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03521_ch_T0000526;gene_id=HG03521_ch_G0000187;Parent=HG03521_ch_T0000526;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG03521_ch_T0000526:0;Name=LOC105377217;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20328493	20329702	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03521_ch_T0000526;gene_id=HG03521_ch_G0000187;Parent=HG03521_ch_T0000526;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG03521_ch_T0000526:0;Name=LOC105377217;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20329703	20329831	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03521_ch_T0000526;gene_id=HG03521_ch_G0000187;Parent=HG03521_ch_T0000526;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG03521_ch_T0000526:1;Name=LOC105377217;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20329832	20330541	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03521_ch_T0000526;gene_id=HG03521_ch_G0000187;Parent=HG03521_ch_T0000526;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=intron:HG03521_ch_T0000526:1;Name=LOC105377217;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20330542	20332408	.	+	.	source_transcript=hg002_chrY_paternal_346.1;source_transcript_name=hg002_chrY_paternal_346.1;source_gene=hg002_chrY_paternal_346;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_346;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_346.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_346.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377217;transcript_id=HG03521_ch_T0000526;gene_id=HG03521_ch_G0000187;Parent=HG03521_ch_T0000526;transcript_name=hg002_chrY_paternal_346.1;gene_name=LOC105377217;ID=exon:HG03521_ch_T0000526:2;Name=LOC105377217;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20369813	20385589	.	-	.	source_gene_common_name=FAM41AY1;source_gene=hg002_chrY_paternal_394;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;gene_id=HG03521_ch_G0000188;gene_biotype=lncRNA;gene_name=FAM41AY1;gene_sources=liftoff;ID=HG03521_ch_G0000188;Name=FAM41AY1
HG03521_chrY	CAT	transcript	20369813	20385589	1000	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_G0000188;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=HG03521_ch_T0000527;Name=FAM41AY1
HG03521_chrY	CAT	exon	20369813	20370539	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03521_ch_T0000527:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20370540	20370621	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03521_ch_T0000527:0;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20370622	20370843	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03521_ch_T0000527:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20370844	20371055	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03521_ch_T0000527:1;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20371056	20371243	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03521_ch_T0000527:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20371244	20371536	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03521_ch_T0000527:2;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20371537	20371746	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03521_ch_T0000527:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20371747	20372020	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03521_ch_T0000527:3;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20372021	20372114	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03521_ch_T0000527:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20372115	20372223	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03521_ch_T0000527:4;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20372224	20372394	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03521_ch_T0000527:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20372395	20372987	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03521_ch_T0000527:5;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20372988	20373081	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03521_ch_T0000527:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20373082	20373328	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03521_ch_T0000527:6;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20373329	20373457	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03521_ch_T0000527:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20373458	20384786	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03521_ch_T0000527:7;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20384787	20384836	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03521_ch_T0000527:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20384837	20385431	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=intron:HG03521_ch_T0000527:8;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20385432	20385589	.	-	.	source_transcript=hg002_chrY_paternal_394.1;source_transcript_name=hg002_chrY_paternal_394.1;source_gene=hg002_chrY_paternal_394;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_394;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_394.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_394.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=FAM41AY1;alternative_source_transcripts=hg002_chrY_paternal_394.1,hg002_chrY_paternal_394.1;transcript_id=HG03521_ch_T0000527;gene_id=HG03521_ch_G0000188;Parent=HG03521_ch_T0000527;transcript_name=hg002_chrY_paternal_394.1;gene_name=FAM41AY1;ID=exon:HG03521_ch_T0000527:9;Name=FAM41AY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20464576	20498412	.	+	.	source_gene_common_name=LOC124905304;source_gene=hg002_chrY_paternal_398;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;gene_id=HG03521_ch_G0000189;gene_biotype=lncRNA;gene_name=LOC124905304;gene_sources=liftoff;ID=HG03521_ch_G0000189;Name=LOC124905304
HG03521_chrY	CAT	transcript	20464576	20498412	1000	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_G0000189;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=HG03521_ch_T0000528;Name=LOC124905304
HG03521_chrY	CAT	exon	20464576	20464616	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03521_ch_T0000528:0;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20464617	20467017	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03521_ch_T0000528:0;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20467018	20467180	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03521_ch_T0000528:1;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20467181	20467843	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03521_ch_T0000528:1;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20467844	20467945	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03521_ch_T0000528:2;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20467946	20470307	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03521_ch_T0000528:2;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20470308	20470511	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03521_ch_T0000528:3;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20470512	20472227	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03521_ch_T0000528:3;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20472228	20472362	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03521_ch_T0000528:4;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20472363	20481168	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03521_ch_T0000528:4;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20481169	20481401	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03521_ch_T0000528:5;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20481402	20481494	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03521_ch_T0000528:5;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20481495	20481600	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03521_ch_T0000528:6;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20481601	20487211	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03521_ch_T0000528:6;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20487212	20487339	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03521_ch_T0000528:7;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20487340	20496104	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=intron:HG03521_ch_T0000528:7;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20496105	20498412	.	+	.	source_transcript=hg002_chrY_paternal_398.1;source_transcript_name=hg002_chrY_paternal_398.1;source_gene=hg002_chrY_paternal_398;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_398;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_398.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_398.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905304;alternative_source_transcripts=hg002_chrY_paternal_398.1,hg002_chrY_paternal_398.1;transcript_id=HG03521_ch_T0000528;gene_id=HG03521_ch_G0000189;Parent=HG03521_ch_T0000528;transcript_name=hg002_chrY_paternal_398.1;gene_name=LOC124905304;ID=exon:HG03521_ch_T0000528:8;Name=LOC124905304;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20510189	20569531	.	+	.	source_gene_common_name=HSFY1;source_gene=hg002_chrY_paternal_403;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;gene_id=HG03521_ch_G0000190;gene_biotype=protein_coding;gene_name=HSFY1;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000190;Name=HSFY1
HG03521_chrY	CAT	transcript	20510189	20529138	100	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_G0000190;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03521_ch_T0000529;Name=HSFY1
HG03521_chrY	CAT	exon	20510189	20510383	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000529;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03521_ch_T0000529:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20510358	20510383	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000529;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03521_ch_T0000529:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	20510358	20510360	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000529;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03521_ch_T0000529;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20510384	20527578	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000529;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03521_ch_T0000529:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20527579	20527846	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000529;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03521_ch_T0000529:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20527579	20527846	.	+	1	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000529;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03521_ch_T0000529:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20527847	20528324	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000529;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03521_ch_T0000529:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20528325	20529138	.	+	.	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000529;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03521_ch_T0000529:2;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20528325	20529017	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000529;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03521_ch_T0000529:2;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	20529015	20529017	.	+	0	source_transcript=hg002_chrY_paternal_403.1;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.1,hg002_chrY_paternal_403.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000529;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000529;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03521_ch_T0000529;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20527227	20529138	100	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_G0000190;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03521_ch_T0000530;Name=HSFY1
HG03521_chrY	CAT	exon	20527227	20527480	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03521_ch_T0000530:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20527470	20527480	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03521_ch_T0000530:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	20527470	20527472	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03521_ch_T0000530;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20527481	20527578	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03521_ch_T0000530:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20527579	20527846	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03521_ch_T0000530:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20527579	20527846	.	+	1	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03521_ch_T0000530:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20527847	20528324	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03521_ch_T0000530:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20528325	20529138	.	+	.	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03521_ch_T0000530:2;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20528325	20529017	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03521_ch_T0000530:2;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	20529015	20529017	.	+	0	source_transcript=hg002_chrY_paternal_403.2;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.2,hg002_chrY_paternal_403.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000530;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000530;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03521_ch_T0000530;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20527237	20569531	100	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000531;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_G0000190;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03521_ch_T0000531;Name=HSFY1
HG03521_chrY	CAT	exon	20527237	20527846	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000531;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03521_ch_T0000531:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20527334	20527846	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000531;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03521_ch_T0000531:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	20527334	20527336	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000531;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03521_ch_T0000531;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20527847	20569103	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000531;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03521_ch_T0000531:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20569104	20569531	.	+	.	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000531;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03521_ch_T0000531:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20569104	20569202	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000531;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03521_ch_T0000531:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	20569200	20569202	.	+	0	source_transcript=hg002_chrY_paternal_403.4;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.4,hg002_chrY_paternal_403.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000531;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000531;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03521_ch_T0000531;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20527237	20532622	1000	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000532;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_G0000190;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG03521_ch_T0000532;Name=HSFY1
HG03521_chrY	CAT	exon	20527237	20527846	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000532;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000532;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03521_ch_T0000532:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20527847	20530659	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000532;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000532;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03521_ch_T0000532:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20530660	20530769	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000532;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000532;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03521_ch_T0000532:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20530770	20531332	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000532;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000532;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03521_ch_T0000532:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20531333	20531419	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000532;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000532;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03521_ch_T0000532:2;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20531420	20532466	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000532;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000532;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03521_ch_T0000532:2;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20532467	20532622	.	+	.	source_transcript=hg002_chrY_paternal_403.3;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.3,hg002_chrY_paternal_403.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000532;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000532;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03521_ch_T0000532:3;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20527237	20569531	1000	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_G0000190;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=HG03521_ch_T0000533;Name=HSFY1
HG03521_chrY	CAT	exon	20527237	20527846	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03521_ch_T0000533:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20527847	20530659	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03521_ch_T0000533:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20530660	20530769	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03521_ch_T0000533:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20530770	20531332	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03521_ch_T0000533:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20531333	20531419	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03521_ch_T0000533:2;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20531420	20532466	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03521_ch_T0000533:2;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20532467	20532621	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03521_ch_T0000533:3;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20532622	20563240	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03521_ch_T0000533:3;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20563241	20563326	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03521_ch_T0000533:4;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20563327	20569103	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=intron:HG03521_ch_T0000533:4;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20569104	20569531	.	+	.	source_transcript=hg002_chrY_paternal_403.5;source_transcript_name=hg002_chrY_paternal_403.1;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_403.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.5,hg002_chrY_paternal_403.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000533;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000533;transcript_name=hg002_chrY_paternal_403.1;gene_name=HSFY1;ID=exon:HG03521_ch_T0000533:5;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20527266	20529138	100	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000534;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_G0000190;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=HG03521_ch_T0000534;Name=HSFY1
HG03521_chrY	CAT	exon	20527266	20527846	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000534;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000534;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03521_ch_T0000534:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20527334	20527846	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000534;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000534;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03521_ch_T0000534:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	20527334	20527336	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000534;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000534;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=start_codon:HG03521_ch_T0000534;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20527847	20528324	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000534;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000534;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=intron:HG03521_ch_T0000534:0;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20528325	20529138	.	+	.	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000534;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000534;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=exon:HG03521_ch_T0000534:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20528325	20529017	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000534;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000534;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=CDS:HG03521_ch_T0000534:1;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	20529015	20529017	.	+	0	source_transcript=hg002_chrY_paternal_403.6;source_transcript_name=hg002_chrY_paternal_403.6;source_gene=hg002_chrY_paternal_403;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_403;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_403.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_403.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY1;alternative_source_transcripts=hg002_chrY_paternal_403.6,hg002_chrY_paternal_403.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000534;gene_id=HG03521_ch_G0000190;Parent=HG03521_ch_T0000534;transcript_name=hg002_chrY_paternal_403.6;gene_name=HSFY1;ID=stop_codon:HG03521_ch_T0000534;Name=HSFY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20561774	20571089	.	-	.	source_gene_common_name=TTTY9B;source_gene=hg002_chrY_paternal_407;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;gene_id=HG03521_ch_G0000191;gene_biotype=lncRNA;gene_name=TTTY9B;gene_sources=liftoff;ID=HG03521_ch_G0000191;Name=TTTY9B
HG03521_chrY	CAT	transcript	20561774	20571089	1000	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03521_ch_T0000535;gene_id=HG03521_ch_G0000191;Parent=HG03521_ch_G0000191;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=HG03521_ch_T0000535;Name=TTTY9B
HG03521_chrY	CAT	exon	20561774	20562916	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03521_ch_T0000535;gene_id=HG03521_ch_G0000191;Parent=HG03521_ch_T0000535;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03521_ch_T0000535:0;Name=TTTY9B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20562917	20567979	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03521_ch_T0000535;gene_id=HG03521_ch_G0000191;Parent=HG03521_ch_T0000535;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03521_ch_T0000535:0;Name=TTTY9B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20567980	20568116	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03521_ch_T0000535;gene_id=HG03521_ch_G0000191;Parent=HG03521_ch_T0000535;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03521_ch_T0000535:1;Name=TTTY9B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20568117	20568698	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03521_ch_T0000535;gene_id=HG03521_ch_G0000191;Parent=HG03521_ch_T0000535;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03521_ch_T0000535:1;Name=TTTY9B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20568699	20568812	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03521_ch_T0000535;gene_id=HG03521_ch_G0000191;Parent=HG03521_ch_T0000535;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03521_ch_T0000535:2;Name=TTTY9B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20568813	20569173	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03521_ch_T0000535;gene_id=HG03521_ch_G0000191;Parent=HG03521_ch_T0000535;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03521_ch_T0000535:2;Name=TTTY9B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20569174	20569274	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03521_ch_T0000535;gene_id=HG03521_ch_G0000191;Parent=HG03521_ch_T0000535;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03521_ch_T0000535:3;Name=TTTY9B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20569275	20570947	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03521_ch_T0000535;gene_id=HG03521_ch_G0000191;Parent=HG03521_ch_T0000535;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=intron:HG03521_ch_T0000535:3;Name=TTTY9B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20570948	20571089	.	-	.	source_transcript=hg002_chrY_paternal_407.1;source_transcript_name=hg002_chrY_paternal_407.1;source_gene=hg002_chrY_paternal_407;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_407;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_407.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_407.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9B;alternative_source_transcripts=hg002_chrY_paternal_407.1,hg002_chrY_paternal_407.1;transcript_id=HG03521_ch_T0000535;gene_id=HG03521_ch_G0000191;Parent=HG03521_ch_T0000535;transcript_name=hg002_chrY_paternal_407.1;gene_name=TTTY9B;ID=exon:HG03521_ch_T0000535:4;Name=TTTY9B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20710476	20719791	.	+	.	source_gene_common_name=TTTY9A;source_gene=hg002_chrY_paternal_412;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;gene_id=HG03521_ch_G0000192;gene_biotype=lncRNA;gene_name=TTTY9A;gene_sources=liftoff;ID=HG03521_ch_G0000192;Name=TTTY9A
HG03521_chrY	CAT	transcript	20710476	20719791	1000	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03521_ch_T0000536;gene_id=HG03521_ch_G0000192;Parent=HG03521_ch_G0000192;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=HG03521_ch_T0000536;Name=TTTY9A
HG03521_chrY	CAT	exon	20710476	20710617	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03521_ch_T0000536;gene_id=HG03521_ch_G0000192;Parent=HG03521_ch_T0000536;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03521_ch_T0000536:0;Name=TTTY9A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20710618	20712290	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03521_ch_T0000536;gene_id=HG03521_ch_G0000192;Parent=HG03521_ch_T0000536;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03521_ch_T0000536:0;Name=TTTY9A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20712291	20712391	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03521_ch_T0000536;gene_id=HG03521_ch_G0000192;Parent=HG03521_ch_T0000536;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03521_ch_T0000536:1;Name=TTTY9A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20712392	20712752	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03521_ch_T0000536;gene_id=HG03521_ch_G0000192;Parent=HG03521_ch_T0000536;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03521_ch_T0000536:1;Name=TTTY9A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20712753	20712866	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03521_ch_T0000536;gene_id=HG03521_ch_G0000192;Parent=HG03521_ch_T0000536;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03521_ch_T0000536:2;Name=TTTY9A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20712867	20713448	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03521_ch_T0000536;gene_id=HG03521_ch_G0000192;Parent=HG03521_ch_T0000536;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03521_ch_T0000536:2;Name=TTTY9A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20713449	20713585	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03521_ch_T0000536;gene_id=HG03521_ch_G0000192;Parent=HG03521_ch_T0000536;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03521_ch_T0000536:3;Name=TTTY9A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20713586	20718648	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03521_ch_T0000536;gene_id=HG03521_ch_G0000192;Parent=HG03521_ch_T0000536;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=intron:HG03521_ch_T0000536:3;Name=TTTY9A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20718649	20719791	.	+	.	source_transcript=hg002_chrY_paternal_412.1;source_transcript_name=hg002_chrY_paternal_412.1;source_gene=hg002_chrY_paternal_412;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_412;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_412.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_412.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY9A;alternative_source_transcripts=hg002_chrY_paternal_412.1,hg002_chrY_paternal_412.1;transcript_id=HG03521_ch_T0000536;gene_id=HG03521_ch_G0000192;Parent=HG03521_ch_T0000536;transcript_name=hg002_chrY_paternal_412.1;gene_name=TTTY9A;ID=exon:HG03521_ch_T0000536:4;Name=TTTY9A;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20712034	20771365	.	-	.	source_gene_common_name=HSFY2;source_gene=hg002_chrY_paternal_413;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;gene_id=HG03521_ch_G0000193;gene_biotype=protein_coding;gene_name=HSFY2;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000193;Name=HSFY2
HG03521_chrY	CAT	transcript	20712034	20754336	100	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000537;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_G0000193;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03521_ch_T0000537;Name=HSFY2
HG03521_chrY	CAT	exon	20712034	20712461	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000537;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000537;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000537:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20712363	20712461	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000537;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000537;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000537:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	20712363	20712365	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000537;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000537;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03521_ch_T0000537;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20712462	20753706	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000537;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000537;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03521_ch_T0000537:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20753707	20754336	.	-	.	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000537;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000537;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000537:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20753707	20754219	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000537;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000537;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000537:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	20754217	20754219	.	-	0	source_transcript=hg002_chrY_paternal_413.1;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.1,hg002_chrY_paternal_413.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000537;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000537;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03521_ch_T0000537;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20712034	20754336	1000	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_G0000193;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=HG03521_ch_T0000538;Name=HSFY2
HG03521_chrY	CAT	exon	20712034	20712461	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03521_ch_T0000538:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20712462	20718238	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03521_ch_T0000538:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20718239	20718324	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03521_ch_T0000538:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20718325	20748937	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03521_ch_T0000538:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20748938	20749092	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03521_ch_T0000538:2;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20749093	20750139	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03521_ch_T0000538:2;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20750140	20750226	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03521_ch_T0000538:3;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20750227	20750783	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03521_ch_T0000538:3;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20750784	20750893	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03521_ch_T0000538:4;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20750894	20753706	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=intron:HG03521_ch_T0000538:4;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20753707	20754336	.	-	.	source_transcript=hg002_chrY_paternal_413.2;source_transcript_name=hg002_chrY_paternal_413.1;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_413.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.2,hg002_chrY_paternal_413.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000538;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000538;transcript_name=hg002_chrY_paternal_413.1;gene_name=HSFY2;ID=exon:HG03521_ch_T0000538:5;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20750115	20754336	100	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_G0000193;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03521_ch_T0000539;Name=HSFY2
HG03521_chrY	CAT	exon	20750115	20750226	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000539:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20750205	20750226	.	-	1	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000539:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	20750205	20750207	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03521_ch_T0000539;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20750227	20750783	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03521_ch_T0000539:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20750784	20750893	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000539:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20750784	20750893	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000539:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20750894	20753706	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03521_ch_T0000539:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20753707	20754336	.	-	.	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000539:2;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20753707	20754219	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000539:2;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	20754217	20754219	.	-	0	source_transcript=hg002_chrY_paternal_413.3;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.3,hg002_chrY_paternal_413.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000539;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000539;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03521_ch_T0000539;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20752415	20754327	100	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_G0000193;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03521_ch_T0000540;Name=HSFY2
HG03521_chrY	CAT	exon	20752415	20753228	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000540:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20752536	20753228	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000540:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	20752536	20752538	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03521_ch_T0000540;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20753229	20753706	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03521_ch_T0000540:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20753707	20753974	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000540:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20753707	20753974	.	-	1	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000540:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20753975	20754072	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03521_ch_T0000540:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20754073	20754327	.	-	.	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000540:2;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20754073	20754083	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000540:2;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	20754081	20754083	.	-	0	source_transcript=hg002_chrY_paternal_413.4;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.4,hg002_chrY_paternal_413.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000540;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000540;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03521_ch_T0000540;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20752415	20754336	100	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000541;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_G0000193;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03521_ch_T0000541;Name=HSFY2
HG03521_chrY	CAT	exon	20752415	20753228	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000541;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000541:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20752536	20753228	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000541;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000541:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	20752536	20752538	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000541;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03521_ch_T0000541;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20753229	20753706	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000541;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03521_ch_T0000541:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20753707	20754336	.	-	.	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000541;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000541:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20753707	20754219	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000541;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000541:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	20754217	20754219	.	-	0	source_transcript=hg002_chrY_paternal_413.5;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.5,hg002_chrY_paternal_413.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000541;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000541;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03521_ch_T0000541;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20752415	20771365	100	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_G0000193;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=HG03521_ch_T0000542;Name=HSFY2
HG03521_chrY	CAT	exon	20752415	20753228	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000542:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20752536	20753228	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000542:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	20752536	20752538	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=stop_codon:HG03521_ch_T0000542;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20753229	20753706	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03521_ch_T0000542:0;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20753707	20753974	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000542:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20753707	20753974	.	-	1	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000542:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20753975	20771170	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=intron:HG03521_ch_T0000542:1;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20771171	20771365	.	-	.	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=exon:HG03521_ch_T0000542:2;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	20771171	20771196	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=CDS:HG03521_ch_T0000542:2;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	20771194	20771196	.	-	0	source_transcript=hg002_chrY_paternal_413.6;source_transcript_name=hg002_chrY_paternal_413.6;source_gene=hg002_chrY_paternal_413;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_413;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_413.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_413.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=HSFY2;alternative_source_transcripts=hg002_chrY_paternal_413.6,hg002_chrY_paternal_413.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000542;gene_id=HG03521_ch_G0000193;Parent=HG03521_ch_T0000542;transcript_name=hg002_chrY_paternal_413.6;gene_name=HSFY2;ID=start_codon:HG03521_ch_T0000542;Name=HSFY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20783141	20816997	.	-	.	source_gene_common_name=LOC124905305;source_gene=hg002_chrY_paternal_418;gene_id=HG03521_ch_G0000194;gene_biotype=lncRNA;gene_name=LOC124905305;gene_sources=liftoff;ID=HG03521_ch_G0000194;Name=LOC124905305
HG03521_chrY	CAT	transcript	20783141	20816995	1000	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_G0000194;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG03521_ch_T0000543;Name=LOC124905305
HG03521_chrY	CAT	exon	20783141	20785448	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000543:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20785449	20794213	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000543:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20794214	20794341	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000543:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20794342	20799952	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000543:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20799953	20800384	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000543:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20800385	20809177	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000543:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20809178	20809312	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000543:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20809313	20811028	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000543:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20811029	20811232	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000543:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20811233	20813594	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000543:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20813595	20813696	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000543:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20813697	20814354	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000543:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20814355	20814517	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000543:6;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20814518	20816918	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000543:6;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20816919	20816995	.	-	.	source_transcript=hg002_chrY_paternal_418.1;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000543;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000543;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000543:7;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20783141	20816997	1000	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_G0000194;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=HG03521_ch_T0000544;Name=LOC124905305
HG03521_chrY	CAT	exon	20783141	20785448	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000544:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20785449	20799952	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000544:0;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20799953	20800384	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000544:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20800385	20809177	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000544:1;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20809178	20809312	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000544:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20809313	20811028	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000544:2;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20811029	20811232	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000544:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20811233	20813594	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000544:3;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20813595	20813696	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000544:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20813697	20814354	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000544:4;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20814355	20814517	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000544:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20814518	20816918	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=intron:HG03521_ch_T0000544:5;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20816919	20816997	.	-	.	source_transcript=hg002_chrY_paternal_418.2;source_transcript_name=hg002_chrY_paternal_418.1;source_gene=hg002_chrY_paternal_418;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_418;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_418.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_418.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905305;transcript_id=HG03521_ch_T0000544;gene_id=HG03521_ch_G0000194;Parent=HG03521_ch_T0000544;transcript_name=hg002_chrY_paternal_418.1;gene_name=LOC124905305;ID=exon:HG03521_ch_T0000544:6;Name=LOC124905305;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20814328	20814489	.	-	.	source_gene_common_name=LOC124905307;source_gene=hg002_chrY_paternal_422;gene_id=HG03521_ch_G0000195;gene_biotype=snRNA;gene_name=LOC124905307;gene_sources=liftoff;ID=HG03521_ch_G0000195;Name=LOC124905307
HG03521_chrY	CAT	transcript	20814328	20814489	1000	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG03521_ch_T0000545;gene_id=HG03521_ch_G0000195;Parent=HG03521_ch_G0000195;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=HG03521_ch_T0000545;Name=LOC124905307
HG03521_chrY	CAT	exon	20814328	20814489	.	-	.	source_transcript=hg002_chrY_paternal_422.1;source_transcript_name=hg002_chrY_paternal_422.1;source_gene=hg002_chrY_paternal_422;source_gene_biotype=snRNA;original_gene_id=hg002_chrY_paternal_422;gene_biotype=snRNA;transcript_biotype=snRNA;alignment_id=hg002_chrY_paternal_422.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_422.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905307;transcript_id=HG03521_ch_T0000545;gene_id=HG03521_ch_G0000195;Parent=HG03521_ch_T0000545;transcript_name=hg002_chrY_paternal_422.1;gene_name=LOC124905307;ID=exon:HG03521_ch_T0000545:0;Name=LOC124905307;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	20853095	21058157	.	-	.	source_gene_common_name=TTTY14;source_gene=hg002_chrY_paternal_425;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;gene_id=HG03521_ch_G0000196;gene_biotype=lncRNA;gene_name=TTTY14;gene_sources=liftoff;ID=HG03521_ch_G0000196;Name=TTTY14
HG03521_chrY	CAT	transcript	20853095	21056613	1000	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03521_ch_T0000546;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_G0000196;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03521_ch_T0000546;Name=TTTY14
HG03521_chrY	CAT	exon	20853095	20853428	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03521_ch_T0000546;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000546;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000546:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20853429	20857661	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03521_ch_T0000546;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000546;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000546:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20857662	20857799	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03521_ch_T0000546;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000546;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000546:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20857800	20892971	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03521_ch_T0000546;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000546;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000546:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20892972	20893086	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03521_ch_T0000546;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000546;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000546:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20893087	21049333	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03521_ch_T0000546;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000546;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000546:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21049334	21049408	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03521_ch_T0000546;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000546;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000546:3;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21049409	21056550	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03521_ch_T0000546;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000546;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000546:3;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21056551	21056613	.	-	.	source_transcript=hg002_chrY_paternal_425.1;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.1,hg002_chrY_paternal_425.1;transcript_id=HG03521_ch_T0000546;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000546;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000546:4;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20853095	21056639	1000	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03521_ch_T0000547;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_G0000196;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03521_ch_T0000547;Name=TTTY14
HG03521_chrY	CAT	exon	20853095	20853428	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03521_ch_T0000547;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000547:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20853429	20857661	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03521_ch_T0000547;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000547:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20857662	20857799	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03521_ch_T0000547;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000547:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20857800	21054108	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03521_ch_T0000547;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000547:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21054109	21054171	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03521_ch_T0000547;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000547:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21054172	21056550	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03521_ch_T0000547;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000547:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21056551	21056639	.	-	.	source_transcript=hg002_chrY_paternal_425.2;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.2,hg002_chrY_paternal_425.2;transcript_id=HG03521_ch_T0000547;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000547;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000547:3;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20853095	21058157	1000	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03521_ch_T0000548;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_G0000196;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03521_ch_T0000548;Name=TTTY14
HG03521_chrY	CAT	exon	20853095	20853428	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03521_ch_T0000548;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000548:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20853429	20913346	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03521_ch_T0000548;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000548:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20913347	20913445	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03521_ch_T0000548;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000548:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20913446	20913960	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03521_ch_T0000548;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000548:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20913961	20914079	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03521_ch_T0000548;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000548:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20914080	21049333	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03521_ch_T0000548;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000548:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21049334	21049408	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03521_ch_T0000548;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000548:3;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21049409	21057654	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03521_ch_T0000548;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000548:3;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21057655	21058157	.	-	.	source_transcript=hg002_chrY_paternal_425.3;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.3,hg002_chrY_paternal_425.3;transcript_id=HG03521_ch_T0000548;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000548;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000548:4;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20853095	21058157	1000	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03521_ch_T0000549;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_G0000196;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03521_ch_T0000549;Name=TTTY14
HG03521_chrY	CAT	exon	20853095	20853428	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03521_ch_T0000549;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000549:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20853429	20857661	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03521_ch_T0000549;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000549:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20857662	20857799	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03521_ch_T0000549;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000549:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20857800	21049333	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03521_ch_T0000549;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000549:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21049334	21049408	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03521_ch_T0000549;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000549:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21049409	21057654	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03521_ch_T0000549;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000549:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21057655	21058157	.	-	.	source_transcript=hg002_chrY_paternal_425.4;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.4,hg002_chrY_paternal_425.4;transcript_id=HG03521_ch_T0000549;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000549;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000549:3;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20853095	21058157	1000	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03521_ch_T0000550;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_G0000196;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03521_ch_T0000550;Name=TTTY14
HG03521_chrY	CAT	exon	20853095	20853428	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03521_ch_T0000550;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000550:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20853429	20857661	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03521_ch_T0000550;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000550:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	20857662	20857799	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03521_ch_T0000550;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000550:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20857800	21057654	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03521_ch_T0000550;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000550:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21057655	21058157	.	-	.	source_transcript=hg002_chrY_paternal_425.5;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.5,hg002_chrY_paternal_425.5;transcript_id=HG03521_ch_T0000550;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000550;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000550:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20912611	21056639	1000	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03521_ch_T0000551;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_G0000196;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03521_ch_T0000551;Name=TTTY14
HG03521_chrY	CAT	exon	20912611	20913445	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03521_ch_T0000551;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000551:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20913446	21025145	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03521_ch_T0000551;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000551:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21025146	21025299	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03521_ch_T0000551;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000551:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21025300	21025845	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03521_ch_T0000551;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000551:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21025846	21025895	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03521_ch_T0000551;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000551:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21025896	21049333	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03521_ch_T0000551;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000551:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21049334	21049408	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03521_ch_T0000551;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000551:3;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21049409	21056550	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03521_ch_T0000551;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000551:3;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21056551	21056639	.	-	.	source_transcript=hg002_chrY_paternal_425.6;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.6,hg002_chrY_paternal_425.6;transcript_id=HG03521_ch_T0000551;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000551;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000551:4;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20913055	21056613	1000	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03521_ch_T0000552;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_G0000196;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03521_ch_T0000552;Name=TTTY14
HG03521_chrY	CAT	exon	20913055	20913445	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03521_ch_T0000552;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000552:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20913446	21049333	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03521_ch_T0000552;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000552:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21049334	21049408	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03521_ch_T0000552;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000552:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21049409	21056550	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03521_ch_T0000552;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000552:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21056551	21056613	.	-	.	source_transcript=hg002_chrY_paternal_425.7;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.7,hg002_chrY_paternal_425.7;transcript_id=HG03521_ch_T0000552;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000552;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000552:2;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	20913055	21058157	1000	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03521_ch_T0000553;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_G0000196;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=HG03521_ch_T0000553;Name=TTTY14
HG03521_chrY	CAT	exon	20913055	20913445	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03521_ch_T0000553;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000553:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	20913446	21057654	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03521_ch_T0000553;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=intron:HG03521_ch_T0000553:0;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21057655	21058157	.	-	.	source_transcript=hg002_chrY_paternal_425.8;source_transcript_name=hg002_chrY_paternal_425.1;source_gene=hg002_chrY_paternal_425;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_425;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_425.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_425.8;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY14;alternative_source_transcripts=hg002_chrY_paternal_425.8,hg002_chrY_paternal_425.8;transcript_id=HG03521_ch_T0000553;gene_id=HG03521_ch_G0000196;Parent=HG03521_ch_T0000553;transcript_name=hg002_chrY_paternal_425.1;gene_name=TTTY14;ID=exon:HG03521_ch_T0000553:1;Name=TTTY14;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	21060466	21069488	.	+	.	source_gene_common_name=LOC124905306;source_gene=hg002_chrY_paternal_429;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;gene_id=HG03521_ch_G0000197;gene_biotype=lncRNA;gene_name=LOC124905306;gene_sources=liftoff;ID=HG03521_ch_G0000197;Name=LOC124905306
HG03521_chrY	CAT	transcript	21060466	21069488	1000	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03521_ch_T0000554;gene_id=HG03521_ch_G0000197;Parent=HG03521_ch_G0000197;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=HG03521_ch_T0000554;Name=LOC124905306
HG03521_chrY	CAT	exon	21060466	21061335	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03521_ch_T0000554;gene_id=HG03521_ch_G0000197;Parent=HG03521_ch_T0000554;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG03521_ch_T0000554:0;Name=LOC124905306;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21061336	21067109	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03521_ch_T0000554;gene_id=HG03521_ch_G0000197;Parent=HG03521_ch_T0000554;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=intron:HG03521_ch_T0000554:0;Name=LOC124905306;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21067110	21069488	.	+	.	source_transcript=hg002_chrY_paternal_429.1;source_transcript_name=hg002_chrY_paternal_429.1;source_gene=hg002_chrY_paternal_429;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_429;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_429.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_429.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124905306;alternative_source_transcripts=hg002_chrY_paternal_429.1,hg002_chrY_paternal_429.1;transcript_id=HG03521_ch_T0000554;gene_id=HG03521_ch_G0000197;Parent=HG03521_ch_T0000554;transcript_name=hg002_chrY_paternal_429.1;gene_name=LOC124905306;ID=exon:HG03521_ch_T0000554:1;Name=LOC124905306;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	21436362	21484083	.	-	.	source_gene_common_name=BCORP1;source_gene=hg002_chrY_paternal_431;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;gene_id=HG03521_ch_G0000198;gene_biotype=transcribed_pseudogene;gene_name=BCORP1;gene_sources=liftoff;ID=HG03521_ch_G0000198;Name=BCORP1
HG03521_chrY	CAT	transcript	21436362	21484083	1000	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_G0000198;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG03521_ch_T0000555;Name=BCORP1
HG03521_chrY	CAT	exon	21436362	21437795	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000555:0;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21437796	21439849	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000555:0;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21439850	21440005	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000555:1;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21440006	21440214	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000555:1;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21440215	21440292	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000555:2;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21440293	21446030	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000555:2;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21446031	21446152	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000555:3;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21446153	21447380	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000555:3;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21447381	21448299	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000555:4;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21448300	21454829	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000555:4;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21454830	21455069	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000555:5;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21455070	21455564	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000555:5;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21455565	21455828	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000555:6;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21455829	21461093	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000555:6;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21461094	21461219	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000555:7;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21461220	21483961	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000555:7;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21483962	21484083	.	-	.	source_transcript=hg002_chrY_paternal_431.1;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.1,hg002_chrY_paternal_431.1;transcript_id=HG03521_ch_T0000555;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000555;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000555:8;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21436362	21484083	1000	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_G0000198;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=HG03521_ch_T0000556;Name=BCORP1
HG03521_chrY	CAT	exon	21436362	21437795	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:0;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21437796	21437987	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000556:0;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21437988	21438048	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:1;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21438049	21439849	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000556:1;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21439850	21440005	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:2;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21440006	21440214	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000556:2;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21440215	21440292	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:3;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21440293	21440884	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000556:3;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21440885	21441030	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:4;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21441031	21446030	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000556:4;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21446031	21446152	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:5;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21446153	21447380	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000556:5;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21447381	21448299	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:6;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21448300	21454829	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000556:6;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21454830	21455069	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:7;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21455070	21455564	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000556:7;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21455565	21455828	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:8;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21455829	21461093	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000556:8;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21461094	21461219	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:9;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21461220	21483961	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=intron:HG03521_ch_T0000556:9;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21483962	21484083	.	-	.	source_transcript=hg002_chrY_paternal_431.2;source_transcript_name=hg002_chrY_paternal_431.1;source_gene=hg002_chrY_paternal_431;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_431;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_431.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_431.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BCORP1;alternative_source_transcripts=hg002_chrY_paternal_431.2,hg002_chrY_paternal_431.2;transcript_id=HG03521_ch_T0000556;gene_id=HG03521_ch_G0000198;Parent=HG03521_ch_T0000556;transcript_name=hg002_chrY_paternal_431.1;gene_name=BCORP1;ID=exon:HG03521_ch_T0000556:10;Name=BCORP1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	21462541	21464380	.	-	.	source_gene_common_name=LOC102723934;source_gene=hg002_chrY_paternal_432;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;gene_id=HG03521_ch_G0000199;gene_biotype=protein_coding;gene_name=LOC102723934;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000199;Name=LOC102723934
HG03521_chrY	CAT	transcript	21462541	21464380	100	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_G0000199;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=HG03521_ch_T0000557;Name=LOC102723934
HG03521_chrY	CAT	exon	21462541	21462929	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_T0000557;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG03521_ch_T0000557:0;Name=LOC102723934;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21462541	21462929	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_T0000557;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG03521_ch_T0000557:0;Name=LOC102723934;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21462541	21462543	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_T0000557;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=stop_codon:HG03521_ch_T0000557;Name=LOC102723934;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21462930	21463241	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_T0000557;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG03521_ch_T0000557:0;Name=LOC102723934;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21463242	21463253	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_T0000557;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG03521_ch_T0000557:1;Name=LOC102723934;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21463242	21463253	.	-	2	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_T0000557;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG03521_ch_T0000557:1;Name=LOC102723934;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21463254	21463333	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_T0000557;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=intron:HG03521_ch_T0000557:1;Name=LOC102723934;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21463334	21464380	.	-	.	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_T0000557;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=exon:HG03521_ch_T0000557:2;Name=LOC102723934;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21463334	21464357	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_T0000557;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=CDS:HG03521_ch_T0000557:2;Name=LOC102723934;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21464355	21464357	.	-	0	source_transcript=hg002_chrY_paternal_432.1;source_transcript_name=hg002_chrY_paternal_432.1;source_gene=hg002_chrY_paternal_432;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_432;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_432.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_432.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723934;alternative_source_transcripts=hg002_chrY_paternal_432.1,hg002_chrY_paternal_432.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000557;gene_id=HG03521_ch_G0000199;Parent=HG03521_ch_T0000557;transcript_name=hg002_chrY_paternal_432.1;gene_name=LOC102723934;ID=start_codon:HG03521_ch_T0000557;Name=LOC102723934;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	21534805	21547913	.	-	.	source_gene_common_name=LOC105377223;source_gene=hg002_chrY_paternal_433;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;gene_id=HG03521_ch_G0000200;gene_biotype=lncRNA;gene_name=LOC105377223;gene_sources=liftoff;ID=HG03521_ch_G0000200;Name=LOC105377223
HG03521_chrY	CAT	transcript	21534805	21547913	1000	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03521_ch_T0000558;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_G0000200;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03521_ch_T0000558;Name=LOC105377223
HG03521_chrY	CAT	exon	21534805	21537716	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03521_ch_T0000558;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000558;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000558:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21537717	21538133	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03521_ch_T0000558;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000558;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000558:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538134	21538193	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03521_ch_T0000558;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000558;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000558:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21538194	21538927	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03521_ch_T0000558;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000558;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000558:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538928	21539044	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03521_ch_T0000558;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000558;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000558:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21539045	21547885	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03521_ch_T0000558;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000558;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000558:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21547886	21547913	.	-	.	source_transcript=hg002_chrY_paternal_433.1;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.1,hg002_chrY_paternal_433.1;transcript_id=HG03521_ch_T0000558;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000558;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000558:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21534805	21547913	1000	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03521_ch_T0000559;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_G0000200;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03521_ch_T0000559;Name=LOC105377223
HG03521_chrY	CAT	exon	21534805	21537716	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03521_ch_T0000559;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000559:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21537717	21538133	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03521_ch_T0000559;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000559:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538134	21538193	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03521_ch_T0000559;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000559:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21538194	21538943	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03521_ch_T0000559;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000559:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538944	21539044	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03521_ch_T0000559;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000559:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21539045	21547885	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03521_ch_T0000559;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000559:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21547886	21547913	.	-	.	source_transcript=hg002_chrY_paternal_433.2;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.2,hg002_chrY_paternal_433.2;transcript_id=HG03521_ch_T0000559;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000559;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000559:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21534805	21547913	1000	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03521_ch_T0000560;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_G0000200;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03521_ch_T0000560;Name=LOC105377223
HG03521_chrY	CAT	exon	21534805	21537716	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03521_ch_T0000560;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000560:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21537717	21538133	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03521_ch_T0000560;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000560:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538134	21538193	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03521_ch_T0000560;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000560:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21538194	21538927	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03521_ch_T0000560;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000560:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538928	21539044	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03521_ch_T0000560;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000560:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21539045	21540243	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03521_ch_T0000560;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000560:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21540244	21547913	.	-	.	source_transcript=hg002_chrY_paternal_433.3;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.3,hg002_chrY_paternal_433.3;transcript_id=HG03521_ch_T0000560;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000560;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000560:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21534805	21547913	1000	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03521_ch_T0000561;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_G0000200;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03521_ch_T0000561;Name=LOC105377223
HG03521_chrY	CAT	exon	21534805	21536460	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03521_ch_T0000561;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000561:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21536461	21538133	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03521_ch_T0000561;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000561:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538134	21538193	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03521_ch_T0000561;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000561:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21538194	21538943	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03521_ch_T0000561;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000561:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538944	21539044	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03521_ch_T0000561;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000561:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21539045	21540243	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03521_ch_T0000561;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000561:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21540244	21547913	.	-	.	source_transcript=hg002_chrY_paternal_433.4;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.4,hg002_chrY_paternal_433.4;transcript_id=HG03521_ch_T0000561;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000561;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000561:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21534805	21547913	1000	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03521_ch_T0000562;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_G0000200;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03521_ch_T0000562;Name=LOC105377223
HG03521_chrY	CAT	exon	21534805	21536460	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03521_ch_T0000562;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000562:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21536461	21538133	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03521_ch_T0000562;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000562:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538134	21538193	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03521_ch_T0000562;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000562:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21538194	21538927	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03521_ch_T0000562;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000562:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538928	21539044	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03521_ch_T0000562;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000562:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21539045	21547885	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03521_ch_T0000562;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000562:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21547886	21547913	.	-	.	source_transcript=hg002_chrY_paternal_433.5;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.5,hg002_chrY_paternal_433.5;transcript_id=HG03521_ch_T0000562;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000562;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000562:3;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21534805	21547913	1000	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03521_ch_T0000563;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_G0000200;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03521_ch_T0000563;Name=LOC105377223
HG03521_chrY	CAT	exon	21534805	21538193	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03521_ch_T0000563;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000563:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21538194	21538927	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03521_ch_T0000563;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000563:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538928	21539044	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03521_ch_T0000563;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000563:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21539045	21540243	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03521_ch_T0000563;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000563:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21540244	21547913	.	-	.	source_transcript=hg002_chrY_paternal_433.6;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.6,hg002_chrY_paternal_433.6;transcript_id=HG03521_ch_T0000563;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000563;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000563:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21534805	21547913	1000	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03521_ch_T0000564;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_G0000200;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=HG03521_ch_T0000564;Name=LOC105377223
HG03521_chrY	CAT	exon	21534805	21538193	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03521_ch_T0000564;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000564:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21538194	21538927	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03521_ch_T0000564;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000564:0;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21538928	21539044	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03521_ch_T0000564;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000564:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21539045	21547885	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03521_ch_T0000564;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=intron:HG03521_ch_T0000564:1;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21547886	21547913	.	-	.	source_transcript=hg002_chrY_paternal_433.7;source_transcript_name=hg002_chrY_paternal_433.1;source_gene=hg002_chrY_paternal_433;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_433;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_433.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_433.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377223;alternative_source_transcripts=hg002_chrY_paternal_433.7,hg002_chrY_paternal_433.7;transcript_id=HG03521_ch_T0000564;gene_id=HG03521_ch_G0000200;Parent=HG03521_ch_T0000564;transcript_name=hg002_chrY_paternal_433.1;gene_name=LOC105377223;ID=exon:HG03521_ch_T0000564:2;Name=LOC105377223;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	21548262	21588078	.	+	.	source_gene_common_name=TXLNGY;source_gene=hg002_chrY_paternal_434;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;gene_id=HG03521_ch_G0000201;gene_biotype=transcribed_pseudogene;gene_name=TXLNGY;gene_sources=liftoff;ID=HG03521_ch_G0000201;Name=TXLNGY
HG03521_chrY	CAT	transcript	21548262	21571327	1000	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03521_ch_T0000565;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_G0000201;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG03521_ch_T0000565;Name=TXLNGY
HG03521_chrY	CAT	exon	21548262	21548386	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03521_ch_T0000565;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000565;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000565:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21548387	21568113	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03521_ch_T0000565;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000565;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000565:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21568114	21568411	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03521_ch_T0000565;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000565;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000565:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21568412	21570424	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03521_ch_T0000565;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000565;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000565:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21570425	21570516	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03521_ch_T0000565;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000565;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000565:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21570517	21570986	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03521_ch_T0000565;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000565;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000565:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21570987	21571327	.	+	.	source_transcript=hg002_chrY_paternal_434.1;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.1,hg002_chrY_paternal_434.1;transcript_id=HG03521_ch_T0000565;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000565;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000565:3;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21548262	21588078	1000	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_G0000201;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=HG03521_ch_T0000566;Name=TXLNGY
HG03521_chrY	CAT	exon	21548262	21548386	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000566:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21548387	21568113	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000566:0;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21568114	21568411	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000566:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21568412	21570424	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000566:1;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21570425	21570516	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000566:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21570517	21572683	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000566:2;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21572684	21572863	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000566:3;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21572864	21574302	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000566:3;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21574303	21574497	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000566:4;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21574498	21576918	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000566:4;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21576919	21577038	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000566:5;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21577039	21578498	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000566:5;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21578499	21578573	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000566:6;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21578574	21580646	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000566:6;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21580647	21580739	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000566:7;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21580740	21583123	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000566:7;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21583124	21583219	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000566:8;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21583220	21584704	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=intron:HG03521_ch_T0000566:8;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21584705	21588078	.	+	.	source_transcript=hg002_chrY_paternal_434.2;source_transcript_name=hg002_chrY_paternal_434.1;source_gene=hg002_chrY_paternal_434;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_434;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_434.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_434.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TXLNGY;alternative_source_transcripts=hg002_chrY_paternal_434.2,hg002_chrY_paternal_434.2;transcript_id=HG03521_ch_T0000566;gene_id=HG03521_ch_G0000201;Parent=HG03521_ch_T0000566;transcript_name=hg002_chrY_paternal_434.1;gene_name=TXLNGY;ID=exon:HG03521_ch_T0000566:9;Name=TXLNGY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	21684769	21725630	.	-	.	source_gene_common_name=KDM5D;source_gene=hg002_chrY_paternal_435;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;gene_id=HG03521_ch_G0000202;gene_biotype=protein_coding;gene_name=KDM5D;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000202;Name=KDM5D
HG03521_chrY	CAT	transcript	21684769	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000567;Name=KDM5D
HG03521_chrY	CAT	exon	21684769	21687249	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21686899	21687249	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21686899	21686901	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000567;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687250	21687344	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687345	21687544	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687345	21687544	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687545	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689147	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689148	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689148	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690713	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690713	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690714	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21704244	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21704245	21704337	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21704245	21704337	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21704338	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21720431	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21720432	21720566	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21720432	21720566	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21720567	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:26;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000567:26;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000567;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000567:26;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.1;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.1,hg002_chrY_paternal_435.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000567;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000567;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000567:27;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21684769	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000568;Name=KDM5D
HG03521_chrY	CAT	exon	21684769	21687249	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21686899	21687249	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21686899	21686901	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000568;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687250	21687344	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687345	21687544	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687345	21687544	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687545	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689225	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689226	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689226	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690482	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690482	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690483	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21720431	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21720432	21720566	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21720432	21720566	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21720567	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000568:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000568;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000568:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.10;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.10;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.10;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.10,hg002_chrY_paternal_435.10;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000568;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000568;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000568:26;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21684769	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000569;Name=KDM5D
HG03521_chrY	CAT	exon	21684769	21687249	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21686899	21687249	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21686899	21686901	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000569;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687250	21687344	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687345	21687544	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687345	21687544	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687545	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689147	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689148	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689148	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690482	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690482	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690483	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000569:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000569;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000569:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.2;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.2,hg002_chrY_paternal_435.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000569;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000569;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000569:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21684769	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000570;Name=KDM5D
HG03521_chrY	CAT	exon	21684769	21687249	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21686899	21687249	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21686899	21686901	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000570;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687250	21687344	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687345	21687544	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687345	21687544	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687545	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689225	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689226	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689226	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690482	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690482	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690483	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000570:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000570;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000570:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.3;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.3,hg002_chrY_paternal_435.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000570;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000570;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000570:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21684769	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000571;Name=KDM5D
HG03521_chrY	CAT	exon	21684769	21687249	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21686899	21687249	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21686899	21686901	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000571;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687250	21687344	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687345	21687544	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687345	21687544	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687545	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689147	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689148	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689148	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690713	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690713	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690714	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21720431	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21720432	21720566	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21720432	21720566	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21720567	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000571:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000571;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000571:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.4;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.4,hg002_chrY_paternal_435.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000571;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000571;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000571:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21684769	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000572;Name=KDM5D
HG03521_chrY	CAT	exon	21684769	21687249	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21686899	21687249	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21686899	21686901	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000572;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687250	21687344	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687345	21687544	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687345	21687544	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687545	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689147	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689148	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689148	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690713	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690713	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690714	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21720431	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21720432	21720566	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21720432	21720566	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21720567	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000572:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000572;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000572:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.5;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.5,hg002_chrY_paternal_435.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000572;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000572;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000572:26;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21684769	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000573;Name=KDM5D
HG03521_chrY	CAT	exon	21684769	21687249	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21686899	21687249	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21686899	21686901	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000573;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687250	21687344	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687345	21687544	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687345	21687544	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687545	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689147	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689148	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689148	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690713	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690713	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690714	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000573;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000573:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.6;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.6,hg002_chrY_paternal_435.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000573;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000573;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000573:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21684769	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000574;Name=KDM5D
HG03521_chrY	CAT	exon	21684769	21687249	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21686899	21687249	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21686899	21686901	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000574;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687250	21687344	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687345	21687544	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687345	21687544	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687545	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689147	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689148	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689148	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690482	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690482	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690483	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21720431	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21720432	21720566	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21720432	21720566	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21720567	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000574:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000574;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000574:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.7;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.7,hg002_chrY_paternal_435.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000574;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000574;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000574:26;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21684769	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000575;Name=KDM5D
HG03521_chrY	CAT	exon	21684769	21687249	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21686899	21687249	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21686899	21686901	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000575;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687250	21687344	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687345	21687544	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687345	21687544	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687545	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689225	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689226	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689226	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690713	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690713	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690714	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21720431	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21720432	21720566	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21720432	21720566	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21720567	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000575:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000575;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000575:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.8;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.8,hg002_chrY_paternal_435.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000575;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000575;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000575:26;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21684769	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000576;Name=KDM5D
HG03521_chrY	CAT	exon	21684769	21687249	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21686899	21687249	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21686899	21686901	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000576;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687250	21687344	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687345	21687544	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687345	21687544	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687545	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689225	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689226	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689226	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690713	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690713	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690714	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000576;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000576:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.9;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.9;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.9;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.9,hg002_chrY_paternal_435.9;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000576;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000576;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000576:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21687382	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000577;Name=KDM5D
HG03521_chrY	CAT	exon	21687382	21687512	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687484	21687512	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21687484	21687486	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000577;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687513	21687697	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21687698	21687767	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21687698	21687767	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21687768	21688050	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688051	21688650	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688051	21688650	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688651	21688837	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21688838	21688975	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21688838	21688975	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21688976	21689147	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689148	21689327	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689148	21689327	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689328	21689778	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21689779	21689917	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21689779	21689917	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21689918	21690354	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21690355	21690713	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21690355	21690713	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21690714	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21720431	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21720432	21720566	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21720432	21720566	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21720567	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:20;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:21;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:22;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:23;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000577;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000577:24;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.11;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.11;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.11;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.11,hg002_chrY_paternal_435.11;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000577;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000577;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000577:25;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21690364	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000578;Name=KDM5D
HG03521_chrY	CAT	exon	21690364	21691164	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691081	21691164	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21691081	21691083	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000578;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691165	21691279	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21691280	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21691280	21691376	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696255	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696256	21696403	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696256	21696403	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696404	21696518	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696519	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696519	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21720431	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21720432	21720566	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21720432	21720566	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21720567	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000578;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000578:18;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.12;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.12;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.12;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.12,hg002_chrY_paternal_435.12;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000578;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000578;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000578:19;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21691304	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000579;Name=KDM5D
HG03521_chrY	CAT	exon	21691304	21691376	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21691377	21696487	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696488	21696643	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696511	21696643	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21696511	21696513	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000579;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696644	21696726	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21696727	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696727	21696908	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21720431	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21720432	21720566	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21720432	21720566	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21720567	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000579:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000579;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000579:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.13;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.13;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.13;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.13,hg002_chrY_paternal_435.13;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000579;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000579;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000579:17;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21696775	21725630	100	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_G0000202;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=HG03521_ch_T0000580;Name=KDM5D
HG03521_chrY	CAT	exon	21696775	21696908	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21696892	21696908	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	21696892	21696894	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=stop_codon:HG03521_ch_T0000580;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21696909	21697002	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:0;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697003	21697015	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697003	21697015	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697016	21697182	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:1;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697183	21697377	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697183	21697377	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697378	21697499	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:2;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21697500	21697619	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21697500	21697619	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21697620	21701775	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:3;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21701776	21701938	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21701776	21701938	.	-	1	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21701939	21702033	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:4;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21702034	21702215	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21702034	21702215	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21702216	21712675	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:5;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712676	21712834	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712676	21712834	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21712835	21712949	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:6;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21712950	21713069	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21712950	21713069	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713070	21713487	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:7;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21713488	21713646	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21713488	21713646	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21713647	21716255	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:8;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716256	21716401	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716256	21716401	.	-	2	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716402	21716524	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:9;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21716525	21716654	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21716525	21716654	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21716655	21720431	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:10;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21720432	21720566	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21720432	21720566	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21720567	21722221	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:11;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722222	21722392	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722222	21722392	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722393	21722638	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:12;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21722639	21722761	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21722639	21722761	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21722762	21724065	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:13;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21724066	21724143	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21724066	21724143	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21724144	21725288	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:14;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725289	21725457	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	21725289	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=CDS:HG03521_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	21725436	21725438	.	-	0	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=start_codon:HG03521_ch_T0000580;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21725458	21725574	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=intron:HG03521_ch_T0000580:15;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21725575	21725630	.	-	.	source_transcript=hg002_chrY_paternal_435.14;source_transcript_name=hg002_chrY_paternal_435.14;source_gene=hg002_chrY_paternal_435;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_435;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_435.14;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_435.14;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=KDM5D;alternative_source_transcripts=hg002_chrY_paternal_435.14,hg002_chrY_paternal_435.14;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000580;gene_id=HG03521_ch_G0000202;Parent=HG03521_ch_T0000580;transcript_name=hg002_chrY_paternal_435.14;gene_name=KDM5D;ID=exon:HG03521_ch_T0000580:16;Name=KDM5D;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	21725660	21738352	.	+	.	source_gene_common_name=LOC105377224;source_gene=hg002_chrY_paternal_436;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;gene_id=HG03521_ch_G0000203;gene_biotype=lncRNA;gene_name=LOC105377224;gene_sources=liftoff;ID=HG03521_ch_G0000203;Name=LOC105377224
HG03521_chrY	CAT	transcript	21725660	21738459	1000	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03521_ch_T0000581;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_G0000203;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG03521_ch_T0000581;Name=LOC105377224
HG03521_chrY	CAT	exon	21725660	21726617	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03521_ch_T0000581;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000581;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03521_ch_T0000581:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21726618	21735528	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03521_ch_T0000581;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000581;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03521_ch_T0000581:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21735529	21735718	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03521_ch_T0000581;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000581;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03521_ch_T0000581:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21735719	21736107	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03521_ch_T0000581;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000581;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03521_ch_T0000581:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21736108	21738459	.	+	.	source_transcript=hg002_chrY_paternal_436.1;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.1,hg002_chrY_paternal_436.1;transcript_id=HG03521_ch_T0000581;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000581;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03521_ch_T0000581:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21725689	21739974	1000	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03521_ch_T0000582;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_G0000203;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG03521_ch_T0000582;Name=LOC105377224
HG03521_chrY	CAT	exon	21725689	21726617	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03521_ch_T0000582;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000582;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03521_ch_T0000582:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21726618	21735629	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03521_ch_T0000582;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000582;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03521_ch_T0000582:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21735630	21735718	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03521_ch_T0000582;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000582;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03521_ch_T0000582:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21735719	21736107	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03521_ch_T0000582;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000582;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03521_ch_T0000582:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21736108	21739974	.	+	.	source_transcript=hg002_chrY_paternal_436.2;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.2,hg002_chrY_paternal_436.2;transcript_id=HG03521_ch_T0000582;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000582;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03521_ch_T0000582:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	21725742	21738352	1000	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03521_ch_T0000583;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_G0000203;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=HG03521_ch_T0000583;Name=LOC105377224
HG03521_chrY	CAT	exon	21725742	21726617	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03521_ch_T0000583;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03521_ch_T0000583:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21726618	21735629	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03521_ch_T0000583;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03521_ch_T0000583:0;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21735630	21735718	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03521_ch_T0000583;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03521_ch_T0000583:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21735719	21736107	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03521_ch_T0000583;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03521_ch_T0000583:1;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21736108	21736227	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03521_ch_T0000583;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03521_ch_T0000583:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	21736228	21737545	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03521_ch_T0000583;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=intron:HG03521_ch_T0000583:2;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	21737546	21738352	.	+	.	source_transcript=hg002_chrY_paternal_436.3;source_transcript_name=hg002_chrY_paternal_436.1;source_gene=hg002_chrY_paternal_436;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_436;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_436.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_436.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377224;alternative_source_transcripts=hg002_chrY_paternal_436.3,hg002_chrY_paternal_436.3;transcript_id=HG03521_ch_T0000583;gene_id=HG03521_ch_G0000203;Parent=HG03521_ch_T0000583;transcript_name=hg002_chrY_paternal_436.1;gene_name=LOC105377224;ID=exon:HG03521_ch_T0000583:3;Name=LOC105377224;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	22400542	22454088	.	-	.	source_gene_common_name=TTTY10;source_gene=hg002_chrY_paternal_441;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;gene_id=HG03521_ch_G0000204;gene_biotype=lncRNA;gene_name=TTTY10;gene_sources=liftoff;ID=HG03521_ch_G0000204;Name=TTTY10
HG03521_chrY	CAT	transcript	22400542	22454088	1000	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_G0000204;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=HG03521_ch_T0000584;Name=TTTY10
HG03521_chrY	CAT	exon	22400542	22400696	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03521_ch_T0000584:0;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22400697	22401301	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03521_ch_T0000584:0;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22401302	22401541	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03521_ch_T0000584:1;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22401542	22403062	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03521_ch_T0000584:1;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22403063	22403122	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03521_ch_T0000584:2;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22403123	22404745	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03521_ch_T0000584:2;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22404746	22404855	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03521_ch_T0000584:3;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22404856	22442211	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03521_ch_T0000584:3;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22442212	22442316	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03521_ch_T0000584:4;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22442317	22453130	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=intron:HG03521_ch_T0000584:4;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22453131	22454088	.	-	.	source_transcript=hg002_chrY_paternal_441.1;source_transcript_name=hg002_chrY_paternal_441.1;source_gene=hg002_chrY_paternal_441;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_441;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_441.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_441.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY10;alternative_source_transcripts=hg002_chrY_paternal_441.1,hg002_chrY_paternal_441.1;transcript_id=HG03521_ch_T0000584;gene_id=HG03521_ch_G0000204;Parent=HG03521_ch_T0000584;transcript_name=hg002_chrY_paternal_441.1;gene_name=TTTY10;ID=exon:HG03521_ch_T0000584:5;Name=TTTY10;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	22510635	22528014	.	+	.	source_gene_common_name=EIF1AY;source_gene=hg002_chrY_paternal_443;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;gene_id=HG03521_ch_G0000205;gene_biotype=protein_coding;gene_name=EIF1AY;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000205;Name=EIF1AY
HG03521_chrY	CAT	transcript	22510635	22528014	100	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_G0000205;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG03521_ch_T0000585;Name=EIF1AY
HG03521_chrY	CAT	exon	22510635	22510746	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000585:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22510731	22510746	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000585:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	22510731	22510733	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG03521_ch_T0000585;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22510747	22514466	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000585:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22514467	22514550	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000585:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22514467	22514550	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000585:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22514551	22517448	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000585:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22517449	22517552	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000585:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22517449	22517552	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000585:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22517553	22522883	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000585:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22522884	22522965	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000585:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22522884	22522965	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000585:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22522966	22524343	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000585:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22524344	22524435	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000585:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22524344	22524435	.	+	2	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000585:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22524436	22527200	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000585:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22527201	22528014	.	+	.	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000585:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22527201	22527206	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000585:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	22527204	22527206	.	+	0	source_transcript=hg002_chrY_paternal_443.1;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.1,hg002_chrY_paternal_443.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000585;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000585;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG03521_ch_T0000585;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	22510635	22528014	100	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_G0000205;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=HG03521_ch_T0000586;Name=EIF1AY
HG03521_chrY	CAT	exon	22510635	22510746	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000586:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22510731	22510746	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000586:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	22510731	22510733	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=start_codon:HG03521_ch_T0000586;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22510747	22514466	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000586:0;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22514467	22514550	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000586:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22514467	22514550	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000586:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22514551	22517448	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000586:1;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22517449	22517552	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000586:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22517449	22517552	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000586:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22517553	22519333	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000586:2;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22519334	22519384	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000586:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22519334	22519384	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000586:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22519385	22522883	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000586:3;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22522884	22522965	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000586:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22522884	22522965	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000586:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22522966	22524343	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000586:4;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22524344	22524435	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000586:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22524344	22524435	.	+	2	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000586:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22524436	22527200	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=intron:HG03521_ch_T0000586:5;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22527201	22528014	.	+	.	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=exon:HG03521_ch_T0000586:6;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22527201	22527206	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=CDS:HG03521_ch_T0000586:6;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	22527204	22527206	.	+	0	source_transcript=hg002_chrY_paternal_443.2;source_transcript_name=hg002_chrY_paternal_443.2;source_gene=hg002_chrY_paternal_443;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_443;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_443.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_443.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=EIF1AY;alternative_source_transcripts=hg002_chrY_paternal_443.2,hg002_chrY_paternal_443.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000586;gene_id=HG03521_ch_G0000205;Parent=HG03521_ch_T0000586;transcript_name=hg002_chrY_paternal_443.2;gene_name=EIF1AY;ID=stop_codon:HG03521_ch_T0000586;Name=EIF1AY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	22690982	22715905	.	+	.	source_gene_common_name=RPS4Y2;source_gene=hg002_chrY_paternal_446;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;gene_id=HG03521_ch_G0000206;gene_biotype=protein_coding;gene_name=RPS4Y2;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000206;Name=RPS4Y2
HG03521_chrY	CAT	transcript	22690982	22715905	100	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_G0000206;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=HG03521_ch_T0000587;Name=RPS4Y2
HG03521_chrY	CAT	exon	22690982	22691040	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03521_ch_T0000587:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22691038	22691040	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03521_ch_T0000587:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	22691038	22691040	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=start_codon:HG03521_ch_T0000587;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22691041	22691651	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03521_ch_T0000587:0;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22691652	22691729	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03521_ch_T0000587:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22691652	22691729	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03521_ch_T0000587:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22691730	22694740	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03521_ch_T0000587:1;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22694741	22694921	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03521_ch_T0000587:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22694741	22694921	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03521_ch_T0000587:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22694922	22696156	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03521_ch_T0000587:2;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22696157	22696254	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03521_ch_T0000587:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22696157	22696254	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03521_ch_T0000587:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22696255	22703677	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03521_ch_T0000587:3;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22703678	22703849	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03521_ch_T0000587:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22703678	22703849	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03521_ch_T0000587:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22703850	22714381	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03521_ch_T0000587:4;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22714382	22714539	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03521_ch_T0000587:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22714382	22714539	.	+	2	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03521_ch_T0000587:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	22714540	22715803	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=intron:HG03521_ch_T0000587:5;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	22715804	22715905	.	+	.	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=exon:HG03521_ch_T0000587:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	22715804	22715905	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=CDS:HG03521_ch_T0000587:6;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	22715903	22715905	.	+	0	source_transcript=hg002_chrY_paternal_446.1;source_transcript_name=hg002_chrY_paternal_446.1;source_gene=hg002_chrY_paternal_446;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_446;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_446.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_446.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RPS4Y2;alternative_source_transcripts=hg002_chrY_paternal_446.1,hg002_chrY_paternal_446.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000587;gene_id=HG03521_ch_G0000206;Parent=HG03521_ch_T0000587;transcript_name=hg002_chrY_paternal_446.1;gene_name=RPS4Y2;ID=stop_codon:HG03521_ch_T0000587;Name=RPS4Y2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23073538	23107890	.	+	.	source_gene_common_name=LOC105377225;source_gene=hg002_chrY_paternal_451;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;gene_id=HG03521_ch_G0000207;gene_biotype=lncRNA;gene_name=LOC105377225;gene_sources=liftoff;ID=HG03521_ch_G0000207;Name=LOC105377225
HG03521_chrY	CAT	transcript	23073538	23105135	1000	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_G0000207;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03521_ch_T0000588;Name=LOC105377225
HG03521_chrY	CAT	exon	23073538	23073773	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000588:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23073774	23083083	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000588:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23083084	23083134	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000588:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083135	23083326	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000588:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23083327	23083421	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000588:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083422	23086496	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000588:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23086497	23086550	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000588:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23086551	23087746	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000588:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23087747	23087881	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000588:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23087882	23104871	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000588:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23104872	23105135	.	+	.	source_transcript=hg002_chrY_paternal_451.1;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.1,hg002_chrY_paternal_451.1;transcript_id=HG03521_ch_T0000588;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000588;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000588:5;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23073538	23105135	1000	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03521_ch_T0000589;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_G0000207;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03521_ch_T0000589;Name=LOC105377225
HG03521_chrY	CAT	exon	23073538	23073773	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03521_ch_T0000589;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000589:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23073774	23083326	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03521_ch_T0000589;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000589:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23083327	23083421	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03521_ch_T0000589;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000589:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083422	23086496	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03521_ch_T0000589;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000589:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23086497	23086550	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03521_ch_T0000589;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000589:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23086551	23087746	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03521_ch_T0000589;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000589:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23087747	23087881	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03521_ch_T0000589;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000589:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23087882	23104871	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03521_ch_T0000589;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000589:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23104872	23105135	.	+	.	source_transcript=hg002_chrY_paternal_451.2;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.2,hg002_chrY_paternal_451.2;transcript_id=HG03521_ch_T0000589;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000589;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000589:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23073538	23105135	1000	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03521_ch_T0000590;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_G0000207;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03521_ch_T0000590;Name=LOC105377225
HG03521_chrY	CAT	exon	23073538	23073773	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03521_ch_T0000590;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000590:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23073774	23083449	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03521_ch_T0000590;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000590:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23083450	23083503	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03521_ch_T0000590;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000590:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083504	23086496	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03521_ch_T0000590;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000590:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23086497	23086550	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03521_ch_T0000590;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000590:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23086551	23087746	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03521_ch_T0000590;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000590:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23087747	23087881	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03521_ch_T0000590;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000590:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23087882	23104871	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03521_ch_T0000590;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000590:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23104872	23105135	.	+	.	source_transcript=hg002_chrY_paternal_451.3;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.3,hg002_chrY_paternal_451.3;transcript_id=HG03521_ch_T0000590;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000590;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000590:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23073538	23107890	1000	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_G0000207;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03521_ch_T0000591;Name=LOC105377225
HG03521_chrY	CAT	exon	23073538	23073773	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000591:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23073774	23079687	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000591:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23079688	23079779	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000591:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23079780	23083083	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000591:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23083084	23083134	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000591:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083135	23083326	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000591:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23083327	23083421	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000591:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083422	23086496	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000591:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23086497	23086550	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000591:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23086551	23087746	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000591:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23087747	23087881	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000591:5;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23087882	23104871	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000591:5;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23104872	23107890	.	+	.	source_transcript=hg002_chrY_paternal_451.4;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.4,hg002_chrY_paternal_451.4;transcript_id=HG03521_ch_T0000591;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000591;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000591:6;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23078947	23105135	1000	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03521_ch_T0000592;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_G0000207;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03521_ch_T0000592;Name=LOC105377225
HG03521_chrY	CAT	exon	23078947	23083134	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03521_ch_T0000592;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000592:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083135	23083326	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03521_ch_T0000592;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000592:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23083327	23083503	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03521_ch_T0000592;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000592:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083504	23086496	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03521_ch_T0000592;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000592:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23086497	23086550	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03521_ch_T0000592;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000592:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23086551	23087746	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03521_ch_T0000592;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000592:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23087747	23087881	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03521_ch_T0000592;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000592:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23087882	23104871	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03521_ch_T0000592;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000592:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23104872	23105135	.	+	.	source_transcript=hg002_chrY_paternal_451.5;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.5,hg002_chrY_paternal_451.5;transcript_id=HG03521_ch_T0000592;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000592;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000592:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23078947	23105135	1000	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03521_ch_T0000593;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_G0000207;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03521_ch_T0000593;Name=LOC105377225
HG03521_chrY	CAT	exon	23078947	23083134	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03521_ch_T0000593;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000593:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083135	23083449	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03521_ch_T0000593;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000593:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23083450	23083503	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03521_ch_T0000593;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000593:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083504	23086496	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03521_ch_T0000593;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000593:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23086497	23086550	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03521_ch_T0000593;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000593:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23086551	23087746	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03521_ch_T0000593;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000593:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23087747	23087881	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03521_ch_T0000593;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000593:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23087882	23104871	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03521_ch_T0000593;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000593:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23104872	23105135	.	+	.	source_transcript=hg002_chrY_paternal_451.6;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.6;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.6,hg002_chrY_paternal_451.6;transcript_id=HG03521_ch_T0000593;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000593;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000593:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23078947	23105135	1000	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03521_ch_T0000594;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_G0000207;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=HG03521_ch_T0000594;Name=LOC105377225
HG03521_chrY	CAT	exon	23078947	23083134	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03521_ch_T0000594;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000594:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083135	23083326	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03521_ch_T0000594;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000594:0;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23083327	23083503	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03521_ch_T0000594;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000594:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23083504	23086496	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03521_ch_T0000594;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000594:1;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23086497	23086550	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03521_ch_T0000594;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000594:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23086551	23087587	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03521_ch_T0000594;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000594:2;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23087588	23087679	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03521_ch_T0000594;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000594:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23087680	23104871	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03521_ch_T0000594;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=intron:HG03521_ch_T0000594:3;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23104872	23105135	.	+	.	source_transcript=hg002_chrY_paternal_451.7;source_transcript_name=hg002_chrY_paternal_451.1;source_gene=hg002_chrY_paternal_451;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_451;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_451.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_451.7;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377225;alternative_source_transcripts=hg002_chrY_paternal_451.7,hg002_chrY_paternal_451.7;transcript_id=HG03521_ch_T0000594;gene_id=HG03521_ch_G0000207;Parent=HG03521_ch_T0000594;transcript_name=hg002_chrY_paternal_451.1;gene_name=LOC105377225;ID=exon:HG03521_ch_T0000594:4;Name=LOC105377225;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23163053	23188289	.	+	.	source_gene_common_name=LOC107987346;source_gene=hg002_chrY_paternal_453;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;gene_id=HG03521_ch_G0000208;gene_biotype=lncRNA;gene_name=LOC107987346;gene_sources=liftoff;ID=HG03521_ch_G0000208;Name=LOC107987346
HG03521_chrY	CAT	transcript	23163053	23188289	1000	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03521_ch_T0000595;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_G0000208;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG03521_ch_T0000595;Name=LOC107987346
HG03521_chrY	CAT	exon	23163053	23163090	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03521_ch_T0000595;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000595;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03521_ch_T0000595:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23163091	23163267	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03521_ch_T0000595;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000595;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03521_ch_T0000595:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23163268	23163375	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03521_ch_T0000595;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000595;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03521_ch_T0000595:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23163376	23185464	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03521_ch_T0000595;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000595;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03521_ch_T0000595:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23185465	23188289	.	+	.	source_transcript=hg002_chrY_paternal_453.1;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.1,hg002_chrY_paternal_453.1;transcript_id=HG03521_ch_T0000595;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000595;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03521_ch_T0000595:2;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23163053	23188289	1000	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03521_ch_T0000596;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_G0000208;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=HG03521_ch_T0000596;Name=LOC107987346
HG03521_chrY	CAT	exon	23163053	23163090	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03521_ch_T0000596;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03521_ch_T0000596:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23163091	23163267	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03521_ch_T0000596;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03521_ch_T0000596:0;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23163268	23163375	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03521_ch_T0000596;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03521_ch_T0000596:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23163376	23185464	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03521_ch_T0000596;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03521_ch_T0000596:1;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23185465	23185623	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03521_ch_T0000596;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03521_ch_T0000596:2;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23185624	23188037	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03521_ch_T0000596;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=intron:HG03521_ch_T0000596:2;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23188038	23188289	.	+	.	source_transcript=hg002_chrY_paternal_453.2;source_transcript_name=hg002_chrY_paternal_453.1;source_gene=hg002_chrY_paternal_453;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_453;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_453.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_453.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987346;alternative_source_transcripts=hg002_chrY_paternal_453.2,hg002_chrY_paternal_453.2;transcript_id=HG03521_ch_T0000596;gene_id=HG03521_ch_G0000208;Parent=HG03521_ch_T0000596;transcript_name=hg002_chrY_paternal_453.1;gene_name=LOC107987346;ID=exon:HG03521_ch_T0000596:3;Name=LOC107987346;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23182980	23237921	.	-	.	source_gene_common_name=LOC107987347;source_gene=hg002_chrY_paternal_454;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;gene_id=HG03521_ch_G0000209;gene_biotype=lncRNA;gene_name=LOC107987347;gene_sources=liftoff;ID=HG03521_ch_G0000209;Name=LOC107987347
HG03521_chrY	CAT	transcript	23182980	23237921	1000	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03521_ch_T0000597;gene_id=HG03521_ch_G0000209;Parent=HG03521_ch_G0000209;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=HG03521_ch_T0000597;Name=LOC107987347
HG03521_chrY	CAT	exon	23182980	23184065	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03521_ch_T0000597;gene_id=HG03521_ch_G0000209;Parent=HG03521_ch_T0000597;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG03521_ch_T0000597:0;Name=LOC107987347;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23184066	23231065	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03521_ch_T0000597;gene_id=HG03521_ch_G0000209;Parent=HG03521_ch_T0000597;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG03521_ch_T0000597:0;Name=LOC107987347;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23231066	23231131	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03521_ch_T0000597;gene_id=HG03521_ch_G0000209;Parent=HG03521_ch_T0000597;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG03521_ch_T0000597:1;Name=LOC107987347;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23231132	23237471	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03521_ch_T0000597;gene_id=HG03521_ch_G0000209;Parent=HG03521_ch_T0000597;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=intron:HG03521_ch_T0000597:1;Name=LOC107987347;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23237472	23237921	.	-	.	source_transcript=hg002_chrY_paternal_454.1;source_transcript_name=hg002_chrY_paternal_454.1;source_gene=hg002_chrY_paternal_454;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_454;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_454.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_454.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987347;alternative_source_transcripts=hg002_chrY_paternal_454.1,hg002_chrY_paternal_454.1;transcript_id=HG03521_ch_T0000597;gene_id=HG03521_ch_G0000209;Parent=HG03521_ch_T0000597;transcript_name=hg002_chrY_paternal_454.1;gene_name=LOC107987347;ID=exon:HG03521_ch_T0000597:2;Name=LOC107987347;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23316817	23386760	.	-	.	source_gene_common_name=PRORY;source_gene=hg002_chrY_paternal_456;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;gene_id=HG03521_ch_G0000210;gene_biotype=lncRNA;gene_name=PRORY;gene_sources=liftoff;ID=HG03521_ch_G0000210;Name=PRORY
HG03521_chrY	CAT	transcript	23316817	23386760	1000	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03521_ch_T0000598;gene_id=HG03521_ch_G0000210;Parent=HG03521_ch_G0000210;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=HG03521_ch_T0000598;Name=PRORY
HG03521_chrY	CAT	exon	23316817	23318191	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03521_ch_T0000598;gene_id=HG03521_ch_G0000210;Parent=HG03521_ch_T0000598;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03521_ch_T0000598:0;Name=PRORY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23318192	23318342	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03521_ch_T0000598;gene_id=HG03521_ch_G0000210;Parent=HG03521_ch_T0000598;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03521_ch_T0000598:0;Name=PRORY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23318343	23318707	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03521_ch_T0000598;gene_id=HG03521_ch_G0000210;Parent=HG03521_ch_T0000598;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03521_ch_T0000598:1;Name=PRORY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23318708	23318823	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03521_ch_T0000598;gene_id=HG03521_ch_G0000210;Parent=HG03521_ch_T0000598;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03521_ch_T0000598:1;Name=PRORY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23318824	23318880	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03521_ch_T0000598;gene_id=HG03521_ch_G0000210;Parent=HG03521_ch_T0000598;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03521_ch_T0000598:2;Name=PRORY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23318881	23321142	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03521_ch_T0000598;gene_id=HG03521_ch_G0000210;Parent=HG03521_ch_T0000598;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03521_ch_T0000598:2;Name=PRORY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23321143	23321267	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03521_ch_T0000598;gene_id=HG03521_ch_G0000210;Parent=HG03521_ch_T0000598;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03521_ch_T0000598:3;Name=PRORY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23321268	23386557	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03521_ch_T0000598;gene_id=HG03521_ch_G0000210;Parent=HG03521_ch_T0000598;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=intron:HG03521_ch_T0000598:3;Name=PRORY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23386558	23386760	.	-	.	source_transcript=hg002_chrY_paternal_456.1;source_transcript_name=hg002_chrY_paternal_456.1;source_gene=hg002_chrY_paternal_456;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_456;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_456.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_456.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRORY;alternative_source_transcripts=hg002_chrY_paternal_456.1,hg002_chrY_paternal_456.1;transcript_id=HG03521_ch_T0000598;gene_id=HG03521_ch_G0000210;Parent=HG03521_ch_T0000598;transcript_name=hg002_chrY_paternal_456.1;gene_name=PRORY;ID=exon:HG03521_ch_T0000598:4;Name=PRORY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23330059	23336477	.	-	.	source_gene_common_name=RBMY2EP;source_gene=hg002_chrY_paternal_457;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;gene_id=HG03521_ch_G0000211;gene_biotype=transcribed_pseudogene;gene_name=RBMY2EP;gene_sources=liftoff;ID=HG03521_ch_G0000211;Name=RBMY2EP
HG03521_chrY	CAT	transcript	23330059	23336477	1000	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03521_ch_T0000599;gene_id=HG03521_ch_G0000211;Parent=HG03521_ch_G0000211;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=HG03521_ch_T0000599;Name=RBMY2EP
HG03521_chrY	CAT	exon	23330059	23330202	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03521_ch_T0000599;gene_id=HG03521_ch_G0000211;Parent=HG03521_ch_T0000599;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03521_ch_T0000599:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23330203	23330610	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03521_ch_T0000599;gene_id=HG03521_ch_G0000211;Parent=HG03521_ch_T0000599;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03521_ch_T0000599:0;Name=RBMY2EP;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23330611	23330699	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03521_ch_T0000599;gene_id=HG03521_ch_G0000211;Parent=HG03521_ch_T0000599;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03521_ch_T0000599:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23330700	23330781	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03521_ch_T0000599;gene_id=HG03521_ch_G0000211;Parent=HG03521_ch_T0000599;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03521_ch_T0000599:1;Name=RBMY2EP;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23330782	23330892	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03521_ch_T0000599;gene_id=HG03521_ch_G0000211;Parent=HG03521_ch_T0000599;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03521_ch_T0000599:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23330893	23335837	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03521_ch_T0000599;gene_id=HG03521_ch_G0000211;Parent=HG03521_ch_T0000599;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03521_ch_T0000599:2;Name=RBMY2EP;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23335838	23335941	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03521_ch_T0000599;gene_id=HG03521_ch_G0000211;Parent=HG03521_ch_T0000599;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03521_ch_T0000599:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23335942	23336391	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03521_ch_T0000599;gene_id=HG03521_ch_G0000211;Parent=HG03521_ch_T0000599;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=intron:HG03521_ch_T0000599:3;Name=RBMY2EP;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23336392	23336477	.	-	.	source_transcript=hg002_chrY_paternal_457.1;source_transcript_name=hg002_chrY_paternal_457.1;source_gene=hg002_chrY_paternal_457;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_457;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_457.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_457.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2EP;alternative_source_transcripts=hg002_chrY_paternal_457.1,hg002_chrY_paternal_457.1;transcript_id=HG03521_ch_T0000599;gene_id=HG03521_ch_G0000211;Parent=HG03521_ch_T0000599;transcript_name=hg002_chrY_paternal_457.1;gene_name=RBMY2EP;ID=exon:HG03521_ch_T0000599:4;Name=RBMY2EP;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23446250	23460693	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=HG03521_ch_G0000212;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG03521_ch_G0000212;Name=RBMY1A1
HG03521_chrY	CAT	transcript	23446250	23460693	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_G0000212;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000600;Name=RBMY1A1
HG03521_chrY	CAT	exon	23446250	23446397	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23446398	23448258	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000600:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23448259	23448371	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23448263	23448371	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000600:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23448263	23448265	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000600;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23448372	23448841	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000600:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23448842	23448945	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23448842	23448945	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000600:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23448946	23451964	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000600:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23451965	23452142	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23451965	23452142	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000600:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23452143	23454057	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000600:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23454058	23454210	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23454058	23454210	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000600:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23454211	23456220	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000600:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23456221	23456335	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23456221	23456335	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000600:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23456336	23457290	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000600:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23457291	23457401	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23457291	23457401	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000600:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23457402	23457842	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000600:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23457843	23457953	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23457843	23457953	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000600:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23457954	23458387	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000600:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23458388	23458498	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23458388	23458498	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000600:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23458499	23459616	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000600:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23459617	23459705	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23459617	23459705	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000600:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23459706	23460116	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000600:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23460117	23460693	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000600:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23460117	23460415	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000600:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23460413	23460415	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000600;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000600;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000600;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23446250	23460693	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_G0000212;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000601;Name=RBMY1A1
HG03521_chrY	CAT	exon	23446250	23446397	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23446398	23448258	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23448259	23448371	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23448263	23448371	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23448263	23448265	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000601;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23448372	23448841	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23448842	23448945	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23448842	23448945	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23448946	23451964	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23451965	23452142	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23451965	23452142	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23452143	23454057	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23454058	23454210	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23454058	23454210	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23454211	23456220	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23456221	23456335	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23456221	23456335	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23456336	23457290	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23457291	23457401	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23457291	23457401	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23457402	23457842	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23457843	23457953	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23457843	23457953	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23457954	23458387	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23458388	23458498	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23458388	23458498	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23458499	23459419	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23459420	23459530	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23459420	23459530	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23459531	23459616	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23459617	23459705	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23459617	23459705	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23459706	23460116	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000601:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23460117	23460693	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000601:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23460117	23460415	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000601:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23460413	23460415	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000601;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000601;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000601;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23446250	23459705	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_G0000212;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000602;Name=RBMY1A1
HG03521_chrY	CAT	exon	23446250	23446397	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23446398	23448258	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000602:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23448259	23448371	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23448263	23448371	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000602:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23448263	23448265	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000602;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23448372	23448841	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000602:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23448842	23448945	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23448842	23448945	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000602:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23448946	23451964	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000602:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23451965	23452142	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23451965	23452142	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000602:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23452143	23454057	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000602:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23454058	23454210	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23454058	23454210	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000602:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23454211	23456220	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000602:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23456221	23456335	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23456221	23456335	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000602:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23456336	23457290	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000602:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23457291	23457401	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23457291	23457401	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000602:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23457402	23457842	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000602:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23457843	23457953	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23457843	23457953	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000602:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23457954	23458387	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000602:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23458388	23458498	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23458388	23458498	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000602:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23458499	23459419	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000602:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23459420	23459530	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23459420	23459530	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000602:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23459531	23459616	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000602:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23459617	23459705	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000602:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23459617	23459704	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000602:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23459702	23459704	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000602;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000602;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000602;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23446250	23460693	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_G0000212;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000603;Name=RBMY1A1
HG03521_chrY	CAT	exon	23446250	23446397	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23446398	23448258	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000603:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23448259	23448371	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23448372	23448841	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000603:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23448842	23448945	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23448946	23454057	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000603:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23454058	23454210	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23454087	23454210	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000603:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23454087	23454089	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000603;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23454211	23456220	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000603:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23456221	23456335	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23456221	23456335	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000603:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23456336	23457290	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000603:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23457291	23457401	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23457291	23457401	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000603:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23457402	23457842	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000603:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23457843	23457953	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23457843	23457953	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000603:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23457954	23458387	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000603:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23458388	23458498	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23458388	23458498	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000603:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23458499	23459419	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000603:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23459420	23459530	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23459420	23459530	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000603:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23459531	23459616	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000603:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23459617	23459705	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23459617	23459705	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000603:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23459706	23460116	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000603:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23460117	23460693	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000603:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23460117	23460415	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000603:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23460413	23460415	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000603;gene_id=HG03521_ch_G0000212;Parent=HG03521_ch_T0000603;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000603;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23469785	23484232	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_462;gene_id=HG03521_ch_G0000213;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG03521_ch_G0000213;Name=RBMY1A1
HG03521_chrY	CAT	transcript	23469785	23484232	1000	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_G0000213;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000604;Name=RBMY1A1
HG03521_chrY	CAT	exon	23469785	23469932	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23469933	23471793	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23471794	23471906	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23471798	23471906	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23471798	23471800	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000604;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23471907	23472380	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23472381	23472484	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23472381	23472484	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23472485	23475503	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23475504	23475681	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23475504	23475681	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23475682	23477596	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23477597	23477749	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23477597	23477749	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23477750	23479759	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23479760	23479874	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23479760	23479874	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23479875	23480829	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23480830	23480940	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23480830	23480940	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23480941	23481381	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23481382	23481492	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23481382	23481492	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23481493	23481926	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23481927	23482037	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23481927	23482037	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23482038	23482958	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23482959	23483069	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23482959	23483069	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23483070	23483155	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23483156	23483244	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23483156	23483244	.	+	1	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23483245	23483655	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000604:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23483656	23484232	.	+	.	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000604:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23483656	23483954	.	+	2	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000604:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23483952	23483954	.	+	0	source_transcript=hg002_chrY_paternal_462.4;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000604;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000604;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000604;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23469785	23484232	1000	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_G0000213;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000605;Name=RBMY1A1
HG03521_chrY	CAT	exon	23469785	23469932	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23469933	23471793	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000605:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23471794	23471906	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23471907	23472380	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000605:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23472381	23472484	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23472485	23477596	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000605:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23477597	23477749	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23477626	23477749	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000605:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23477626	23477628	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000605;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23477750	23479759	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000605:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23479760	23479874	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23479760	23479874	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000605:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23479875	23480829	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000605:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23480830	23480940	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23480830	23480940	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000605:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23480941	23481381	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000605:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23481382	23481492	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23481382	23481492	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000605:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23481493	23481926	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000605:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23481927	23482037	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23481927	23482037	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000605:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23482038	23482958	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000605:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23482959	23483069	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23482959	23483069	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000605:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23483070	23483155	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000605:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23483156	23483244	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23483156	23483244	.	+	1	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000605:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23483245	23483655	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000605:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23483656	23484232	.	+	.	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000605:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23483656	23483954	.	+	2	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000605:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23483952	23483954	.	+	0	source_transcript=hg002_chrY_paternal_462.3;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000605;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000605;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000605;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23469785	23483244	1000	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_G0000213;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000606;Name=RBMY1A1
HG03521_chrY	CAT	exon	23469785	23469932	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23469933	23471793	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000606:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23471794	23471906	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23471798	23471906	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000606:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23471798	23471800	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000606;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23471907	23472380	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000606:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23472381	23472484	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23472381	23472484	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000606:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23472485	23475503	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000606:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23475504	23475681	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23475504	23475681	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000606:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23475682	23477596	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000606:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23477597	23477749	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23477597	23477749	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000606:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23477750	23479759	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000606:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23479760	23479874	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23479760	23479874	.	+	2	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000606:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23479875	23480829	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000606:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23480830	23480940	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23480830	23480940	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000606:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23480941	23481381	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000606:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23481382	23481492	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23481382	23481492	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000606:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23481493	23481926	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000606:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23481927	23482037	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23481927	23482037	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000606:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23482038	23482958	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000606:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23482959	23483069	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23482959	23483069	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000606:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23483070	23483155	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000606:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23483156	23483244	.	+	.	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000606:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23483156	23483243	.	+	1	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000606:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23483241	23483243	.	+	0	source_transcript=hg002_chrY_paternal_462.1;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000606;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000606;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000606;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23469785	23484232	1000	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_G0000213;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000607;Name=RBMY1A1
HG03521_chrY	CAT	exon	23469785	23469932	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23469933	23471793	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000607:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23471794	23471906	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23471798	23471906	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000607:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23471798	23471800	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000607;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23471907	23472380	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000607:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23472381	23472484	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23472381	23472484	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000607:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23472485	23475503	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000607:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23475504	23475681	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23475504	23475681	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000607:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23475682	23477596	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000607:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23477597	23477749	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23477597	23477749	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000607:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23477750	23479759	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000607:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23479760	23479874	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23479760	23479874	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000607:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23479875	23480829	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000607:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23480830	23480940	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23480830	23480940	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000607:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23480941	23481381	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000607:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23481382	23481492	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23481382	23481492	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000607:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23481493	23481926	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000607:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23481927	23482037	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23481927	23482037	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000607:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23482038	23483155	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000607:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23483156	23483244	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23483156	23483244	.	+	1	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000607:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23483245	23483655	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000607:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23483656	23484232	.	+	.	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000607:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23483656	23483954	.	+	2	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000607:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23483952	23483954	.	+	0	source_transcript=hg002_chrY_paternal_462.2;source_transcript_name=hg002_chrY_paternal_462.1;source_gene=hg002_chrY_paternal_462;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_462;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_462.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_462.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;transcript_id=HG03521_ch_T0000607;gene_id=HG03521_ch_G0000213;Parent=HG03521_ch_T0000607;transcript_name=hg002_chrY_paternal_462.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000607;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23493324	23507770	.	+	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_475;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;gene_id=HG03521_ch_G0000214;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=liftoff;ID=HG03521_ch_G0000214;Name=RBMY1A1
HG03521_chrY	CAT	transcript	23493324	23506782	1000	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_G0000214;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000608;Name=RBMY1A1
HG03521_chrY	CAT	exon	23493324	23493471	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23493472	23495332	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000608:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23495333	23495445	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23495337	23495445	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000608:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23495337	23495339	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000608;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23495446	23495917	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000608:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23495918	23496021	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23495918	23496021	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000608:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23496022	23499040	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000608:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23499041	23499218	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23499041	23499218	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000608:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23499219	23501133	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000608:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23501134	23501286	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23501134	23501286	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000608:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23501287	23503296	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000608:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23503297	23503411	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23503297	23503411	.	+	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000608:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23503412	23504366	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000608:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23504367	23504477	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23504367	23504477	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000608:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23504478	23504918	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000608:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23504919	23505029	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23504919	23505029	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000608:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23505030	23505463	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000608:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23505464	23505574	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23505464	23505574	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000608:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23505575	23506495	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000608:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23506496	23506606	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23506496	23506606	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000608:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23506607	23506693	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000608:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23506694	23506782	.	+	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000608:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23506694	23506781	.	+	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000608:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23506779	23506781	.	+	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.1,hg002_chrY_paternal_462.1;transcript_id=HG03521_ch_T0000608;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000608;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000608;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23493324	23507770	1000	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_G0000214;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000609;Name=RBMY1A1
HG03521_chrY	CAT	exon	23493324	23493471	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23493472	23495332	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000609:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23495333	23495445	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23495337	23495445	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000609:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23495337	23495339	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000609;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23495446	23495917	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000609:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23495918	23496021	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23495918	23496021	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000609:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23496022	23499040	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000609:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23499041	23499218	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23499041	23499218	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000609:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23499219	23501133	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000609:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23501134	23501286	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23501134	23501286	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000609:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23501287	23503296	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000609:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23503297	23503411	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23503297	23503411	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000609:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23503412	23504366	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000609:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23504367	23504477	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23504367	23504477	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000609:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23504478	23504918	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000609:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23504919	23505029	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23504919	23505029	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000609:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23505030	23505463	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000609:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23505464	23505574	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23505464	23505574	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000609:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23505575	23506693	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000609:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23506694	23506782	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23506694	23506782	.	+	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000609:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23506783	23507193	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000609:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23507194	23507770	.	+	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000609:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23507194	23507492	.	+	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000609:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23507490	23507492	.	+	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.2,hg002_chrY_paternal_462.2;transcript_id=HG03521_ch_T0000609;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000609;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000609;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23493324	23507770	1000	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_G0000214;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000610;Name=RBMY1A1
HG03521_chrY	CAT	exon	23493324	23493471	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23493472	23495332	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000610:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23495333	23495445	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23495446	23495917	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000610:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23495918	23496021	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23496022	23501133	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000610:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23501134	23501286	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23501163	23501286	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000610:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23501163	23501165	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000610;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23501287	23503296	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000610:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23503297	23503411	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23503297	23503411	.	+	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000610:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23503412	23504366	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000610:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23504367	23504477	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23504367	23504477	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000610:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23504478	23504918	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000610:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23504919	23505029	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23504919	23505029	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000610:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23505030	23505463	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000610:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23505464	23505574	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23505464	23505574	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000610:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23505575	23506495	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000610:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23506496	23506606	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23506496	23506606	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000610:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23506607	23506693	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000610:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23506694	23506782	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23506694	23506782	.	+	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000610:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23506783	23507193	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000610:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23507194	23507770	.	+	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000610:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23507194	23507492	.	+	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000610:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23507490	23507492	.	+	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.3,hg002_chrY_paternal_462.3;transcript_id=HG03521_ch_T0000610;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000610;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000610;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23493324	23507770	1000	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_G0000214;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000611;Name=RBMY1A1
HG03521_chrY	CAT	exon	23493324	23493471	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23493472	23495332	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23495333	23495445	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23495337	23495445	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23495337	23495339	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000611;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23495446	23495917	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23495918	23496021	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23495918	23496021	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23496022	23499040	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23499041	23499218	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23499041	23499218	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23499219	23501133	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23501134	23501286	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23501134	23501286	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23501287	23503296	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23503297	23503411	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23503297	23503411	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23503412	23504366	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23504367	23504477	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23504367	23504477	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23504478	23504918	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23504919	23505029	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23504919	23505029	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23505030	23505463	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23505464	23505574	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23505464	23505574	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23505575	23506495	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23506496	23506606	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23506496	23506606	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23506607	23506693	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23506694	23506782	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23506694	23506782	.	+	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23506783	23507193	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000611:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23507194	23507770	.	+	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000611:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23507194	23507492	.	+	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000611:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23507490	23507492	.	+	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_462.4,hg002_chrY_paternal_462.4;transcript_id=HG03521_ch_T0000611;gene_id=HG03521_ch_G0000214;Parent=HG03521_ch_T0000611;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000611;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23510642	23542953	.	+	.	source_gene_common_name=RBMY1D;source_gene=hg002_chrY_paternal_463;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;gene_id=HG03521_ch_G0000215;gene_biotype=protein_coding;gene_name=RBMY1D;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000215;Name=RBMY1D
HG03521_chrY	CAT	transcript	23510642	23531308	100	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_G0000215;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03521_ch_T0000612;Name=RBMY1D
HG03521_chrY	CAT	exon	23510642	23510662	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23510663	23518870	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23518871	23518983	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23518875	23518983	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23518875	23518877	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03521_ch_T0000612;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23518984	23519455	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23519456	23519559	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23519456	23519559	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23519560	23522578	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23522579	23522756	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23522579	23522756	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23522757	23524671	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23524672	23524824	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23524672	23524824	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23524825	23526834	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23526835	23526949	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23526835	23526949	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23526950	23527904	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23527905	23528015	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23527905	23528015	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528016	23528456	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23528457	23528567	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23528457	23528567	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528568	23529001	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23529002	23529112	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23529002	23529112	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23529113	23530033	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530034	23530144	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530034	23530144	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530145	23530231	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530232	23530320	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530232	23530320	.	+	1	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530321	23530731	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000612:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530732	23531308	.	+	.	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000612:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530732	23531030	.	+	2	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000612:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23531028	23531030	.	+	0	source_transcript=hg002_chrY_paternal_463.1;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.1,hg002_chrY_paternal_463.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000612;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000612;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03521_ch_T0000612;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23516862	23531308	100	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_G0000215;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03521_ch_T0000613;Name=RBMY1D
HG03521_chrY	CAT	exon	23516862	23517009	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23517010	23518870	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23518871	23518983	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23518875	23518983	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23518875	23518877	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03521_ch_T0000613;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23518984	23519455	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23519456	23519559	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23519456	23519559	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23519560	23522578	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23522579	23522756	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23522579	23522756	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23522757	23524671	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23524672	23524824	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23524672	23524824	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23524825	23526834	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23526835	23526949	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23526835	23526949	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23526950	23527904	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23527905	23528015	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23527905	23528015	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528016	23528456	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23528457	23528567	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23528457	23528567	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528568	23529001	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23529002	23529112	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23529002	23529112	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23529113	23530033	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530034	23530144	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530034	23530144	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530145	23530231	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530232	23530320	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530232	23530320	.	+	1	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530321	23530731	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000613:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530732	23531308	.	+	.	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000613:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530732	23531030	.	+	2	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000613:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23531028	23531030	.	+	0	source_transcript=hg002_chrY_paternal_463.2;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.2,hg002_chrY_paternal_463.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000613;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000613;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03521_ch_T0000613;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23516862	23531308	100	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_G0000215;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03521_ch_T0000614;Name=RBMY1D
HG03521_chrY	CAT	exon	23516862	23517009	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23517010	23518870	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000614:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23518871	23518983	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23518875	23518983	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000614:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23518875	23518877	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03521_ch_T0000614;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23518984	23519455	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000614:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23519456	23519559	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23519456	23519559	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000614:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23519560	23522578	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000614:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23522579	23522756	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23522579	23522756	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000614:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23522757	23524671	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000614:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23524672	23524824	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23524672	23524824	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000614:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23524825	23526834	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000614:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23526835	23526949	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23526835	23526949	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000614:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23526950	23527904	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000614:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23527905	23528015	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23527905	23528015	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000614:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528016	23528456	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000614:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23528457	23528567	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23528457	23528567	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000614:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528568	23529001	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000614:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23529002	23529112	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23529002	23529112	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000614:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23529113	23530231	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000614:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530232	23530320	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530232	23530320	.	+	1	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000614:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530321	23530731	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000614:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530732	23531308	.	+	.	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000614:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530732	23531030	.	+	2	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000614:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23531028	23531030	.	+	0	source_transcript=hg002_chrY_paternal_463.3;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.3,hg002_chrY_paternal_463.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000614;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000614;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03521_ch_T0000614;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23516862	23531308	100	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_G0000215;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03521_ch_T0000615;Name=RBMY1D
HG03521_chrY	CAT	exon	23516862	23517009	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23517010	23517682	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23517683	23517747	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23517748	23518870	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23518871	23518983	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23518933	23518983	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000615:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23518933	23518935	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03521_ch_T0000615;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23518984	23519469	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23519470	23519559	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23519470	23519559	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000615:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23519560	23522578	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23522579	23522756	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23522579	23522756	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000615:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23522757	23524671	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23524672	23524824	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23524672	23524824	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000615:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23524825	23526834	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23526835	23526949	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23526835	23526949	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000615:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23526950	23527904	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23527905	23528015	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23527905	23528015	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000615:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528016	23528456	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23528457	23528567	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23528457	23528567	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000615:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528568	23529001	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23529002	23529112	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23529002	23529112	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000615:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23529113	23530231	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530232	23530320	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530232	23530320	.	+	1	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000615:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530321	23530731	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000615:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530732	23531308	.	+	.	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000615:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530732	23531030	.	+	2	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000615:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23531028	23531030	.	+	0	source_transcript=hg002_chrY_paternal_463.4;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.4,hg002_chrY_paternal_463.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000615;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000615;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03521_ch_T0000615;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23516862	23531308	100	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_G0000215;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03521_ch_T0000616;Name=RBMY1D
HG03521_chrY	CAT	exon	23516862	23517009	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000616:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23517010	23518870	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000616:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23518871	23518983	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000616:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23518875	23518983	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000616:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23518875	23518877	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03521_ch_T0000616;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23518984	23519455	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000616:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23519456	23519559	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000616:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23519456	23519559	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000616:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23519560	23522578	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000616:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23522579	23522756	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000616:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23522579	23522756	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000616:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23522757	23524671	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000616:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23524672	23524824	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000616:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23524672	23524824	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000616:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23524825	23526834	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000616:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23526835	23526949	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000616:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23526835	23526949	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000616:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23526950	23527904	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000616:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23527905	23528015	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000616:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23527905	23528015	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000616:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528016	23530231	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000616:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530232	23530320	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000616:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530232	23530320	.	+	1	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000616:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530321	23530731	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000616:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530732	23531308	.	+	.	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000616:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530732	23531030	.	+	2	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000616:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23531028	23531030	.	+	0	source_transcript=hg002_chrY_paternal_463.5;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.5,hg002_chrY_paternal_463.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000616;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000616;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03521_ch_T0000616;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23516862	23532726	100	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_G0000215;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03521_ch_T0000617;Name=RBMY1D
HG03521_chrY	CAT	exon	23516862	23517009	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23517010	23518870	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23518871	23518983	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23518875	23518983	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23518875	23518877	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03521_ch_T0000617;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23518984	23519455	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23519456	23519559	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23519456	23519559	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23519560	23522578	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23522579	23522756	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23522579	23522756	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23522757	23524671	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23524672	23524824	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23524672	23524824	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23524825	23526834	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23526835	23526949	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23526835	23526949	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23526950	23527904	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23527905	23528015	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23527905	23528015	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528016	23528456	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23528457	23528567	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23528457	23528567	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528568	23529001	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23529002	23529112	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23529002	23529112	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23529113	23530033	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530034	23530144	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530034	23530144	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530145	23530231	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530232	23530320	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530232	23530320	.	+	1	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530321	23531567	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000617:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23531568	23532726	.	+	.	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000617:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23531568	23531575	.	+	2	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000617:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23531573	23531575	.	+	0	source_transcript=hg002_chrY_paternal_463.6;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.6,hg002_chrY_paternal_463.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000617;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000617;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03521_ch_T0000617;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23516862	23542953	100	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_G0000215;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03521_ch_T0000618;Name=RBMY1D
HG03521_chrY	CAT	exon	23516862	23517009	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23517010	23518870	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23518871	23518983	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23518875	23518983	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23518875	23518877	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03521_ch_T0000618;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23518984	23519455	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23519456	23519559	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23519456	23519559	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23519560	23522578	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23522579	23522756	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23522579	23522756	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23522757	23524671	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23524672	23524824	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23524672	23524824	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23524825	23526834	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23526835	23526949	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23526835	23526949	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23526950	23527904	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23527905	23528015	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23527905	23528015	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528016	23528456	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23528457	23528567	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23528457	23528567	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528568	23529001	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23529002	23529112	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23529002	23529112	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23529113	23530033	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530034	23530144	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530034	23530144	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530145	23530231	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530232	23530320	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530232	23530320	.	+	1	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:9;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530321	23541569	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000618:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23541570	23542953	.	+	.	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000618:11;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23541570	23541646	.	+	2	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000618:10;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23541644	23541646	.	+	0	source_transcript=hg002_chrY_paternal_463.7;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.7,hg002_chrY_paternal_463.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000618;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000618;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03521_ch_T0000618;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23519470	23531308	100	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_G0000215;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=HG03521_ch_T0000619;Name=RBMY1D
HG03521_chrY	CAT	exon	23519470	23519559	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000619:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23519560	23524671	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000619:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23524672	23524824	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000619:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23524701	23524824	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000619:0;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23524701	23524703	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=start_codon:HG03521_ch_T0000619;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23524825	23526834	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000619:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23526835	23526949	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000619:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23526835	23526949	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000619:1;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23526950	23527904	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000619:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23527905	23528015	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000619:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23527905	23528015	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000619:2;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528016	23528456	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000619:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23528457	23528567	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000619:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23528457	23528567	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000619:3;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23528568	23529001	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000619:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23529002	23529112	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000619:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23529002	23529112	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000619:4;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23529113	23530033	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000619:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530034	23530144	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000619:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530034	23530144	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000619:5;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530145	23530231	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000619:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530232	23530320	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000619:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530232	23530320	.	+	1	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000619:6;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23530321	23530731	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=intron:HG03521_ch_T0000619:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23530732	23531308	.	+	.	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=exon:HG03521_ch_T0000619:8;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23530732	23531030	.	+	2	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=CDS:HG03521_ch_T0000619:7;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23531028	23531030	.	+	0	source_transcript=hg002_chrY_paternal_463.8;source_transcript_name=hg002_chrY_paternal_463.8;source_gene=hg002_chrY_paternal_463;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_463;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_463.8;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_463.8;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1D;alternative_source_transcripts=hg002_chrY_paternal_463.8,hg002_chrY_paternal_463.8;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000619;gene_id=HG03521_ch_G0000215;Parent=HG03521_ch_T0000619;transcript_name=hg002_chrY_paternal_463.8;gene_name=RBMY1D;ID=stop_codon:HG03521_ch_T0000619;Name=RBMY1D;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23550999	23553251	.	-	.	source_gene_common_name=LOC105379266;source_gene=hg002_chrY_paternal_465;alternative_source_transcripts=hg002_chrY_paternal_465.1;gene_id=HG03521_ch_G0000216;gene_biotype=lncRNA;gene_name=LOC105379266;gene_sources=liftoff,transMap;ID=HG03521_ch_G0000216;Name=LOC105379266
HG03521_chrY	CAT	transcript	23550999	23553251	1000	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000620;gene_id=HG03521_ch_G0000216;Parent=HG03521_ch_G0000216;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=HG03521_ch_T0000620;Name=LOC105379266
HG03521_chrY	CAT	exon	23550999	23552279	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000620;gene_id=HG03521_ch_G0000216;Parent=HG03521_ch_T0000620;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG03521_ch_T0000620:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23552280	23552956	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000620;gene_id=HG03521_ch_G0000216;Parent=HG03521_ch_T0000620;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=intron:HG03521_ch_T0000620:0;Name=LOC105379266;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23552957	23553251	.	-	.	source_transcript=hg002_chrY_paternal_465.1;source_transcript_name=hg002_chrY_paternal_465.1;source_gene=hg002_chrY_paternal_465;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_465;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_465.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_465.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105379266;alternative_source_transcripts=hg002_chrY_paternal_465.1;AdditionalSources=liftoff;transcript_id=HG03521_ch_T0000620;gene_id=HG03521_ch_G0000216;Parent=HG03521_ch_T0000620;transcript_name=hg002_chrY_paternal_465.1;gene_name=LOC105379266;ID=exon:HG03521_ch_T0000620:1;Name=LOC105379266;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23565558	23576624	.	-	.	source_gene_common_name=TTTY13;source_gene=hg002_chrY_paternal_466;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;gene_id=HG03521_ch_G0000217;gene_biotype=lncRNA;gene_name=TTTY13;gene_sources=liftoff;ID=HG03521_ch_G0000217;Name=TTTY13
HG03521_chrY	CAT	transcript	23565558	23576624	1000	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_G0000217;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=HG03521_ch_T0000621;Name=TTTY13
HG03521_chrY	CAT	exon	23565558	23565620	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03521_ch_T0000621:0;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23565621	23566740	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03521_ch_T0000621:0;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23566741	23566832	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03521_ch_T0000621:1;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23566833	23569458	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03521_ch_T0000621:1;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23569459	23569620	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03521_ch_T0000621:2;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23569621	23571229	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03521_ch_T0000621:2;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23571230	23571328	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03521_ch_T0000621:3;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23571329	23571923	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03521_ch_T0000621:3;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23571924	23572085	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03521_ch_T0000621:4;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23572086	23576543	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=intron:HG03521_ch_T0000621:4;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23576544	23576624	.	-	.	source_transcript=hg002_chrY_paternal_466.1;source_transcript_name=hg002_chrY_paternal_466.1;source_gene=hg002_chrY_paternal_466;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_466;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_466.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_466.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY13;alternative_source_transcripts=hg002_chrY_paternal_466.1,hg002_chrY_paternal_466.1;transcript_id=HG03521_ch_T0000621;gene_id=HG03521_ch_G0000217;Parent=HG03521_ch_T0000621;transcript_name=hg002_chrY_paternal_466.1;gene_name=TTTY13;ID=exon:HG03521_ch_T0000621:5;Name=TTTY13;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23751367	23766018	.	-	.	source_gene_common_name=LOC105377236;source_gene=hg002_chrY_paternal_472;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;gene_id=HG03521_ch_G0000218;gene_biotype=lncRNA;gene_name=LOC105377236;gene_sources=liftoff;ID=HG03521_ch_G0000218;Name=LOC105377236
HG03521_chrY	CAT	transcript	23751367	23764792	1000	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03521_ch_T0000622;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_G0000218;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG03521_ch_T0000622;Name=LOC105377236
HG03521_chrY	CAT	exon	23751367	23752910	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03521_ch_T0000622;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000622;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000622:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23752911	23760289	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03521_ch_T0000622;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000622;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03521_ch_T0000622:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23760290	23760425	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03521_ch_T0000622;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000622;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000622:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23760426	23763421	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03521_ch_T0000622;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000622;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03521_ch_T0000622:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23763422	23763583	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03521_ch_T0000622;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000622;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000622:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23763584	23763827	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03521_ch_T0000622;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000622;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03521_ch_T0000622:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23763828	23764792	.	-	.	source_transcript=hg002_chrY_paternal_472.1;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.1,hg002_chrY_paternal_472.1;transcript_id=HG03521_ch_T0000622;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000622;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000622:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23751367	23764792	1000	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03521_ch_T0000623;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_G0000218;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG03521_ch_T0000623;Name=LOC105377236
HG03521_chrY	CAT	exon	23751367	23752910	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03521_ch_T0000623;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000623;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000623:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23752911	23760289	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03521_ch_T0000623;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000623;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03521_ch_T0000623:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23760290	23760425	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03521_ch_T0000623;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000623;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000623:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23760426	23763421	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03521_ch_T0000623;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000623;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03521_ch_T0000623:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23763422	23763496	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03521_ch_T0000623;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000623;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000623:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23763497	23763827	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03521_ch_T0000623;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000623;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03521_ch_T0000623:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23763828	23764792	.	-	.	source_transcript=hg002_chrY_paternal_472.2;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.2,hg002_chrY_paternal_472.2;transcript_id=HG03521_ch_T0000623;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000623;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000623:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23751367	23766018	1000	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03521_ch_T0000624;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_G0000218;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=HG03521_ch_T0000624;Name=LOC105377236
HG03521_chrY	CAT	exon	23751367	23752910	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03521_ch_T0000624;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000624:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23752911	23760289	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03521_ch_T0000624;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03521_ch_T0000624:0;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23760290	23760425	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03521_ch_T0000624;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000624:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23760426	23763421	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03521_ch_T0000624;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03521_ch_T0000624:1;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23763422	23763583	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03521_ch_T0000624;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000624:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23763584	23763827	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03521_ch_T0000624;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03521_ch_T0000624:2;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23763828	23764613	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03521_ch_T0000624;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000624:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23764614	23765862	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03521_ch_T0000624;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=intron:HG03521_ch_T0000624:3;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23765863	23766018	.	-	.	source_transcript=hg002_chrY_paternal_472.3;source_transcript_name=hg002_chrY_paternal_472.1;source_gene=hg002_chrY_paternal_472;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_472;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_472.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_472.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377236;alternative_source_transcripts=hg002_chrY_paternal_472.3,hg002_chrY_paternal_472.3;transcript_id=HG03521_ch_T0000624;gene_id=HG03521_ch_G0000218;Parent=HG03521_ch_T0000624;transcript_name=hg002_chrY_paternal_472.1;gene_name=LOC105377236;ID=exon:HG03521_ch_T0000624:4;Name=LOC105377236;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23778481	23781369	.	+	.	source_gene_common_name=LOC105377237;source_gene=hg002_chrY_paternal_474;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;gene_id=HG03521_ch_G0000219;gene_biotype=lncRNA;gene_name=LOC105377237;gene_sources=liftoff;ID=HG03521_ch_G0000219;Name=LOC105377237
HG03521_chrY	CAT	transcript	23778481	23781369	1000	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03521_ch_T0000625;gene_id=HG03521_ch_G0000219;Parent=HG03521_ch_G0000219;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=HG03521_ch_T0000625;Name=LOC105377237
HG03521_chrY	CAT	exon	23778481	23779718	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03521_ch_T0000625;gene_id=HG03521_ch_G0000219;Parent=HG03521_ch_T0000625;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG03521_ch_T0000625:0;Name=LOC105377237;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23779719	23780890	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03521_ch_T0000625;gene_id=HG03521_ch_G0000219;Parent=HG03521_ch_T0000625;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG03521_ch_T0000625:0;Name=LOC105377237;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23780891	23781050	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03521_ch_T0000625;gene_id=HG03521_ch_G0000219;Parent=HG03521_ch_T0000625;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG03521_ch_T0000625:1;Name=LOC105377237;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23781051	23781210	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03521_ch_T0000625;gene_id=HG03521_ch_G0000219;Parent=HG03521_ch_T0000625;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=intron:HG03521_ch_T0000625:1;Name=LOC105377237;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23781211	23781369	.	+	.	source_transcript=hg002_chrY_paternal_474.1;source_transcript_name=hg002_chrY_paternal_474.1;source_gene=hg002_chrY_paternal_474;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_474;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_474.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_474.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377237;alternative_source_transcripts=hg002_chrY_paternal_474.1,hg002_chrY_paternal_474.1;transcript_id=HG03521_ch_T0000625;gene_id=HG03521_ch_G0000219;Parent=HG03521_ch_T0000625;transcript_name=hg002_chrY_paternal_474.1;gene_name=LOC105377237;ID=exon:HG03521_ch_T0000625:2;Name=LOC105377237;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23822274	23836723	.	-	.	source_gene_common_name=RBMY1A1;source_gene=hg002_chrY_paternal_475;alternative_source_transcripts=hg002_chrY_paternal_475.1;gene_id=HG03521_ch_G0000220;gene_biotype=protein_coding;gene_name=RBMY1A1;gene_sources=augTM,transMap;ID=HG03521_ch_G0000220;Name=RBMY1A1
HG03521_chrY	CAT	transcript	23822274	23836723	1000	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_G0000220;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000626;Name=RBMY1A1
HG03521_chrY	CAT	exon	23822274	23822850	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23822552	23822850	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000626:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23822552	23822554	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000626;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23822851	23823261	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000626:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23823262	23823350	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23823262	23823350	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000626:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23823351	23824468	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000626:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23824469	23824579	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23824469	23824579	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000626:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23824580	23825013	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000626:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23825014	23825124	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23825014	23825124	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000626:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23825125	23825565	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000626:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23825566	23825676	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23825566	23825676	.	-	1	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000626:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23825677	23826631	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000626:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23826632	23826746	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23826632	23826746	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000626:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23826747	23828756	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000626:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23828757	23828909	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23828757	23828909	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000626:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23828910	23830824	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000626:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23830825	23831002	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23830825	23831002	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000626:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23831003	23834021	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000626:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23834022	23834125	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23834022	23834125	.	-	2	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000626:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23834126	23834601	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000626:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23834602	23834714	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23834602	23834710	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000626:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23834708	23834710	.	-	0	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000626;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23834715	23836575	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000626:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23836576	23836723	.	-	.	source_transcript=hg002_chrY_paternal_475.1;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.1;transcript_score=299.89;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000626;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000626;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000626:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23822274	23836723	1000	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_G0000220;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000627;Name=RBMY1A1
HG03521_chrY	CAT	exon	23822274	23822850	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23822552	23822850	.	-	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000627:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23822552	23822554	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000627;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23822851	23823261	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000627:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23823262	23823350	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23823262	23823350	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000627:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23823351	23823436	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000627:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23823437	23823547	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23823437	23823547	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000627:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23823548	23824468	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000627:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23824469	23824579	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23824469	23824579	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000627:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23824580	23825013	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000627:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23825014	23825124	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23825014	23825124	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000627:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23825125	23825565	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000627:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23825566	23825676	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23825566	23825676	.	-	1	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000627:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23825677	23826631	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000627:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23826632	23826746	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23826632	23826746	.	-	2	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000627:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23826747	23828756	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000627:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23828757	23828909	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23828757	23828880	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000627:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23828878	23828880	.	-	0	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000627;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23828910	23834021	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000627:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23834022	23834125	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23834126	23834601	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000627:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23834602	23834714	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23834715	23836575	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000627:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23836576	23836723	.	-	.	source_transcript=hg002_chrY_paternal_475.2;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.2;transcript_score=299.885;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000627;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000627;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000627:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23822274	23836723	1000	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_G0000220;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000628;Name=RBMY1A1
HG03521_chrY	CAT	exon	23822274	23822850	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23822552	23822850	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23822552	23822554	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=stop_codon:HG03521_ch_T0000628;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23822851	23823261	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23823262	23823350	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23823262	23823350	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23823351	23823436	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23823437	23823547	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23823437	23823547	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23823548	23824468	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23824469	23824579	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23824469	23824579	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23824580	23825013	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23825014	23825124	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23825014	23825124	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23825125	23825565	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23825566	23825676	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23825566	23825676	.	-	1	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23825677	23826631	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23826632	23826746	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23826632	23826746	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23826747	23828756	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23828757	23828909	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23828757	23828909	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23828910	23830824	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23830825	23831002	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23830825	23831002	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23831003	23834021	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23834022	23834125	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23834022	23834125	.	-	2	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23834126	23834601	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23834602	23834714	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23834602	23834710	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000628:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23834708	23834710	.	-	0	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000628;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23834715	23836575	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000628:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23836576	23836723	.	-	.	source_transcript=hg002_chrY_paternal_475.3;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.3;transcript_score=299.896;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000628;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000628;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000628:11;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23823262	23836723	1000	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_G0000220;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=HG03521_ch_T0000629;Name=RBMY1A1
HG03521_chrY	CAT	exon	23823262	23823350	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23823263	23823350	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000629:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23823351	23823436	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000629:0;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23823437	23823547	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23823437	23823547	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000629:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23823548	23824468	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000629:1;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23824469	23824579	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23824469	23824579	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000629:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23824580	23825013	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000629:2;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23825014	23825124	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23825014	23825124	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000629:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23825125	23825565	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000629:3;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23825566	23825676	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23825566	23825676	.	-	1	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000629:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23825677	23826631	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000629:4;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23826632	23826746	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23826632	23826746	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000629:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23826747	23828756	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000629:5;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23828757	23828909	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23828757	23828909	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000629:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23828910	23830824	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000629:6;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23830825	23831002	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23830825	23831002	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000629:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23831003	23834021	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000629:7;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23834022	23834125	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23834022	23834125	.	-	2	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000629:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23834126	23834601	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000629:8;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23834602	23834714	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23834602	23834710	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=CDS:HG03521_ch_T0000629:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23834708	23834710	.	-	0	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=start_codon:HG03521_ch_T0000629;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23834715	23836575	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=intron:HG03521_ch_T0000629:9;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23836576	23836723	.	-	.	source_transcript=hg002_chrY_paternal_475.4;source_transcript_name=hg002_chrY_paternal_475.1;source_gene=hg002_chrY_paternal_475;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_475;gene_biotype=protein_coding;transcript_biotype=NA;alignment_id=hg002_chrY_paternal_475.4;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_475.4;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=False;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1A1;alternative_source_transcripts=hg002_chrY_paternal_475.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000629;gene_id=HG03521_ch_G0000220;Parent=HG03521_ch_T0000629;transcript_name=hg002_chrY_paternal_475.1;gene_name=RBMY1A1;ID=exon:HG03521_ch_T0000629:10;Name=RBMY1A1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23844375	23860226	.	-	.	source_gene_common_name=RBMY1E;source_gene=hg002_chrY_paternal_477;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;gene_id=HG03521_ch_G0000221;gene_biotype=protein_coding;gene_name=RBMY1E;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000221;Name=RBMY1E
HG03521_chrY	CAT	transcript	23844375	23860226	100	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_G0000221;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03521_ch_T0000630;Name=RBMY1E
HG03521_chrY	CAT	exon	23844375	23845556	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23845549	23845556	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23845549	23845551	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03521_ch_T0000630;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23845557	23846803	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23846804	23846892	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846804	23846892	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23846893	23846978	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23846979	23847089	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846979	23847089	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23847090	23848010	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23848011	23848121	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23848011	23848121	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23848122	23848555	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23848556	23848666	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23848556	23848666	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23848667	23849107	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23849108	23849218	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23849108	23849218	.	-	1	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23849219	23850173	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23850174	23850288	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23850174	23850288	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23850289	23852298	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23852299	23852451	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23852299	23852451	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23852452	23854366	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23854367	23854544	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23854367	23854544	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23854545	23857563	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23857564	23857667	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23857564	23857667	.	-	2	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23857668	23858139	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23858140	23858252	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23858140	23858248	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000630:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23858246	23858248	.	-	0	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03521_ch_T0000630;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23858253	23860113	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000630:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23860114	23860226	.	-	.	source_transcript=hg002_chrY_paternal_477.1;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.1,hg002_chrY_paternal_477.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000630;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000630;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000630:11;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23845820	23857654	100	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_G0000221;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03521_ch_T0000631;Name=RBMY1E
HG03521_chrY	CAT	exon	23845820	23846392	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000631:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846094	23846392	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000631:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23846094	23846096	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03521_ch_T0000631;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23846393	23846803	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000631:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23846804	23846892	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000631:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846804	23846892	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000631:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23846893	23846978	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000631:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23846979	23847089	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000631:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846979	23847089	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000631:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23847090	23848010	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000631:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23848011	23848121	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000631:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23848011	23848121	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000631:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23848122	23848555	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000631:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23848556	23848666	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000631:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23848556	23848666	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000631:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23848667	23849107	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000631:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23849108	23849218	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000631:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23849108	23849218	.	-	1	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000631:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23849219	23850173	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000631:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23850174	23850288	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000631:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23850174	23850288	.	-	2	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000631:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23850289	23852298	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000631:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23852299	23852451	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000631:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23852299	23852422	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000631:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23852420	23852422	.	-	0	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03521_ch_T0000631;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23852452	23857563	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000631:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23857564	23857654	.	-	.	source_transcript=hg002_chrY_paternal_477.2;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.2,hg002_chrY_paternal_477.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000631;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000631;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000631:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23845820	23860226	100	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_G0000221;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03521_ch_T0000632;Name=RBMY1E
HG03521_chrY	CAT	exon	23845820	23846392	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846094	23846392	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23846094	23846096	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03521_ch_T0000632;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23846393	23846803	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23846804	23846892	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846804	23846892	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23846893	23846978	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23846979	23847089	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846979	23847089	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23847090	23848010	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23848011	23848121	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23848011	23848121	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23848122	23848555	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23848556	23848666	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23848556	23848666	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23848667	23849107	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23849108	23849218	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23849108	23849218	.	-	1	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23849219	23850173	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23850174	23850288	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23850174	23850288	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23850289	23852298	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23852299	23852451	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23852299	23852451	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23852452	23854366	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23854367	23854544	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23854367	23854544	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23854545	23857563	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23857564	23857667	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23857564	23857667	.	-	2	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23857668	23858139	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23858140	23858252	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23858140	23858248	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000632:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23858246	23858248	.	-	0	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03521_ch_T0000632;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23858253	23860113	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000632:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23860114	23860226	.	-	.	source_transcript=hg002_chrY_paternal_477.3;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.3,hg002_chrY_paternal_477.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000632;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000632;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000632:11;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23845820	23860226	100	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_G0000221;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03521_ch_T0000633;Name=RBMY1E
HG03521_chrY	CAT	exon	23845820	23846392	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846094	23846392	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000633:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23846094	23846096	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03521_ch_T0000633;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23846393	23846803	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000633:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23846804	23846892	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846804	23846892	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000633:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23846893	23848010	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000633:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23848011	23848121	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23848011	23848121	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000633:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23848122	23848555	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000633:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23848556	23848666	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23848556	23848666	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000633:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23848667	23849107	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000633:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23849108	23849218	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23849108	23849218	.	-	1	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000633:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23849219	23850173	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000633:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23850174	23850288	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23850174	23850288	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000633:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23850289	23852298	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000633:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23852299	23852451	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23852299	23852451	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000633:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23852452	23854366	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000633:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23854367	23854544	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23854367	23854544	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000633:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23854545	23857563	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000633:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23857564	23857667	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23857564	23857667	.	-	2	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000633:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23857668	23858139	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000633:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23858140	23858252	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23858140	23858248	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000633:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23858246	23858248	.	-	0	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03521_ch_T0000633;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23858253	23860113	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000633:9;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23860114	23860226	.	-	.	source_transcript=hg002_chrY_paternal_477.4;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.4,hg002_chrY_paternal_477.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000633;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000633;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000633:10;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	23845820	23860226	100	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_G0000221;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=HG03521_ch_T0000634;Name=RBMY1E
HG03521_chrY	CAT	exon	23845820	23846392	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000634:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846094	23846392	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000634:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	23846094	23846096	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=stop_codon:HG03521_ch_T0000634;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23846393	23846803	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000634:0;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23846804	23846892	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000634:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23846804	23846892	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000634:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23846893	23849107	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000634:1;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23849108	23849218	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000634:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23849108	23849218	.	-	1	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000634:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23849219	23850173	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000634:2;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23850174	23850288	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000634:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23850174	23850288	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000634:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23850289	23852298	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000634:3;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23852299	23852451	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000634:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23852299	23852451	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000634:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23852452	23854366	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000634:4;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23854367	23854544	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000634:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23854367	23854544	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000634:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23854545	23857563	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000634:5;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23857564	23857667	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000634:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23857564	23857667	.	-	2	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000634:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23857668	23858139	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000634:6;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23858140	23858252	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000634:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	23858140	23858248	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=CDS:HG03521_ch_T0000634:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	23858246	23858248	.	-	0	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=start_codon:HG03521_ch_T0000634;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23858253	23860113	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=intron:HG03521_ch_T0000634:7;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23860114	23860226	.	-	.	source_transcript=hg002_chrY_paternal_477.5;source_transcript_name=hg002_chrY_paternal_477.5;source_gene=hg002_chrY_paternal_477;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_477;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_477.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_477.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1E;alternative_source_transcripts=hg002_chrY_paternal_477.5,hg002_chrY_paternal_477.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000634;gene_id=HG03521_ch_G0000221;Parent=HG03521_ch_T0000634;transcript_name=hg002_chrY_paternal_477.5;gene_name=RBMY1E;ID=exon:HG03521_ch_T0000634:8;Name=RBMY1E;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	23970515	23972542	.	+	.	source_gene_common_name=LOC107987356;source_gene=hg002_chrY_paternal_481;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;gene_id=HG03521_ch_G0000222;gene_biotype=lncRNA;gene_name=LOC107987356;gene_sources=liftoff;ID=HG03521_ch_G0000222;Name=LOC107987356
HG03521_chrY	CAT	transcript	23970515	23972542	1000	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03521_ch_T0000635;gene_id=HG03521_ch_G0000222;Parent=HG03521_ch_G0000222;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=HG03521_ch_T0000635;Name=LOC107987356
HG03521_chrY	CAT	exon	23970515	23970627	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03521_ch_T0000635;gene_id=HG03521_ch_G0000222;Parent=HG03521_ch_T0000635;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG03521_ch_T0000635:0;Name=LOC107987356;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23970628	23970744	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03521_ch_T0000635;gene_id=HG03521_ch_G0000222;Parent=HG03521_ch_T0000635;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG03521_ch_T0000635:0;Name=LOC107987356;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23970745	23970805	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03521_ch_T0000635;gene_id=HG03521_ch_G0000222;Parent=HG03521_ch_T0000635;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG03521_ch_T0000635:1;Name=LOC107987356;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	23970806	23972340	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03521_ch_T0000635;gene_id=HG03521_ch_G0000222;Parent=HG03521_ch_T0000635;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=intron:HG03521_ch_T0000635:1;Name=LOC107987356;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	23972341	23972542	.	+	.	source_transcript=hg002_chrY_paternal_481.1;source_transcript_name=hg002_chrY_paternal_481.1;source_gene=hg002_chrY_paternal_481;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_481;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_481.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_481.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987356;alternative_source_transcripts=hg002_chrY_paternal_481.1,hg002_chrY_paternal_481.1;transcript_id=HG03521_ch_T0000635;gene_id=HG03521_ch_G0000222;Parent=HG03521_ch_T0000635;transcript_name=hg002_chrY_paternal_481.1;gene_name=LOC107987356;ID=exon:HG03521_ch_T0000635:2;Name=LOC107987356;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24013948	24038198	.	-	.	source_gene_common_name=PRY;source_gene=hg002_chrY_paternal_486;alternative_source_transcripts=hg002_chrY_paternal_486.1;gene_id=HG03521_ch_G0000223;gene_biotype=protein_coding;gene_name=PRY;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000223;Name=PRY
HG03521_chrY	CAT	transcript	24013948	24038198	100	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_G0000223;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=HG03521_ch_T0000636;Name=PRY
HG03521_chrY	CAT	exon	24013948	24014773	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03521_ch_T0000636:0;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24014515	24014773	.	-	1	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG03521_ch_T0000636:0;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24014515	24014517	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=stop_codon:HG03521_ch_T0000636;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24014774	24024271	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03521_ch_T0000636:0;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24024272	24024387	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03521_ch_T0000636:1;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24024272	24024387	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG03521_ch_T0000636:1;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24024388	24026962	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03521_ch_T0000636:1;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24026963	24027083	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03521_ch_T0000636:2;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24026963	24027031	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=CDS:HG03521_ch_T0000636:2;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24027029	24027031	.	-	0	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=start_codon:HG03521_ch_T0000636;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24027084	24037922	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03521_ch_T0000636:2;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24037923	24038009	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03521_ch_T0000636:3;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24038010	24038110	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=intron:HG03521_ch_T0000636:3;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24038111	24038198	.	-	.	source_transcript=hg002_chrY_paternal_486.1;source_transcript_name=hg002_chrY_paternal_486.1;source_gene=hg002_chrY_paternal_486;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_486;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_486.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_486.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY;alternative_source_transcripts=hg002_chrY_paternal_486.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000636;gene_id=HG03521_ch_G0000223;Parent=HG03521_ch_T0000636;transcript_name=hg002_chrY_paternal_486.1;gene_name=PRY;ID=exon:HG03521_ch_T0000636:4;Name=PRY;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24043884	24089728	.	-	.	source_gene_common_name=LOC102725532;source_gene=hg002_chrY_paternal_487;alternative_source_transcripts=hg002_chrY_paternal_487.1;gene_id=HG03521_ch_G0000224;gene_biotype=lncRNA;gene_name=LOC102725532;gene_sources=liftoff;ID=HG03521_ch_G0000224;Name=LOC102725532
HG03521_chrY	CAT	transcript	24043884	24089728	1000	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_G0000224;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=HG03521_ch_T0000637;Name=LOC102725532
HG03521_chrY	CAT	exon	24043884	24044561	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:0;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24044562	24045076	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:0;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24045077	24045194	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:1;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24045195	24045738	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:1;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24045739	24045935	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:2;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24045936	24046055	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:2;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24046056	24046141	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:3;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24046142	24047941	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:3;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24047942	24048277	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:4;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24048278	24049743	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:4;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24049744	24049833	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:5;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24049834	24063469	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:5;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24063470	24063823	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:6;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24063824	24064253	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:6;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24064254	24064372	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:7;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24064373	24071550	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:7;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24071551	24071636	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:8;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24071637	24071944	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:8;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24071945	24072167	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:9;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24072168	24082139	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:9;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24082140	24082280	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:10;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24082281	24088827	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:10;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24088828	24089137	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:11;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24089138	24089471	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=intron:HG03521_ch_T0000637:11;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24089472	24089728	.	-	.	source_transcript=hg002_chrY_paternal_487.1;source_transcript_name=hg002_chrY_paternal_487.1;source_gene=hg002_chrY_paternal_487;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_487;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_487.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_487.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102725532;alternative_source_transcripts=hg002_chrY_paternal_487.1;transcript_id=HG03521_ch_T0000637;gene_id=HG03521_ch_G0000224;Parent=HG03521_ch_T0000637;transcript_name=hg002_chrY_paternal_487.1;gene_name=LOC102725532;ID=exon:HG03521_ch_T0000637:12;Name=LOC102725532;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24087175	24089022	.	+	.	source_gene_common_name=TTTY6B;source_gene=hg002_chrY_paternal_488;alternative_source_transcripts=hg002_chrY_paternal_488.1;gene_id=HG03521_ch_G0000225;gene_biotype=lncRNA;gene_name=TTTY6B;gene_sources=liftoff;ID=HG03521_ch_G0000225;Name=TTTY6B
HG03521_chrY	CAT	transcript	24087175	24089022	1000	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG03521_ch_T0000638;gene_id=HG03521_ch_G0000225;Parent=HG03521_ch_G0000225;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=HG03521_ch_T0000638;Name=TTTY6B
HG03521_chrY	CAT	exon	24087175	24087267	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG03521_ch_T0000638;gene_id=HG03521_ch_G0000225;Parent=HG03521_ch_T0000638;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG03521_ch_T0000638:0;Name=TTTY6B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24087268	24087485	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG03521_ch_T0000638;gene_id=HG03521_ch_G0000225;Parent=HG03521_ch_T0000638;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG03521_ch_T0000638:0;Name=TTTY6B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24087486	24087623	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG03521_ch_T0000638;gene_id=HG03521_ch_G0000225;Parent=HG03521_ch_T0000638;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG03521_ch_T0000638:1;Name=TTTY6B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24087624	24088780	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG03521_ch_T0000638;gene_id=HG03521_ch_G0000225;Parent=HG03521_ch_T0000638;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=intron:HG03521_ch_T0000638:1;Name=TTTY6B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24088781	24089022	.	+	.	source_transcript=hg002_chrY_paternal_488.1;source_transcript_name=hg002_chrY_paternal_488.1;source_gene=hg002_chrY_paternal_488;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_488;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_488.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_488.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6B;alternative_source_transcripts=hg002_chrY_paternal_488.1;transcript_id=HG03521_ch_T0000638;gene_id=HG03521_ch_G0000225;Parent=HG03521_ch_T0000638;transcript_name=hg002_chrY_paternal_488.1;gene_name=TTTY6B;ID=exon:HG03521_ch_T0000638:2;Name=TTTY6B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24103742	24125201	.	-	.	source_gene_common_name=RBMY1J;source_gene=hg002_chrY_paternal_489;alternative_source_transcripts=hg002_chrY_paternal_489.1;gene_id=HG03521_ch_G0000226;gene_biotype=protein_coding;gene_name=RBMY1J;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000226;Name=RBMY1J
HG03521_chrY	CAT	transcript	24103742	24125201	100	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_G0000226;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03521_ch_T0000639;Name=RBMY1J
HG03521_chrY	CAT	exon	24103742	24105245	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24105235	24105245	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24105235	24105237	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03521_ch_T0000639;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24105246	24107838	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24107839	24107985	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24107839	24107985	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24107986	24111718	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24111719	24111807	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24111719	24111807	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24111808	24111893	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24111894	24112004	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24111894	24112004	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24112005	24112927	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24112928	24113038	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24112928	24113038	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24113039	24113472	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24113473	24113583	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24113473	24113583	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24113584	24114023	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24114024	24114134	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24114024	24114134	.	-	1	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24114135	24115089	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24115090	24115204	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24115090	24115204	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24115205	24117214	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24117215	24117367	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24117215	24117367	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24117368	24119282	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24119283	24119460	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24119283	24119460	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24119461	24122483	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24122484	24122587	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24122484	24122587	.	-	2	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24122588	24123053	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24123054	24123166	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24123054	24123162	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000639:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24123160	24123162	.	-	0	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03521_ch_T0000639;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24123167	24125027	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000639:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24125028	24125201	.	-	.	source_transcript=hg002_chrY_paternal_489.1;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000639;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000639;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000639:12;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	24110731	24122575	100	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_G0000226;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03521_ch_T0000640;Name=RBMY1J
HG03521_chrY	CAT	exon	24110731	24111307	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000640:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24111009	24111307	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000640:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24111009	24111011	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03521_ch_T0000640;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24111308	24111718	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000640:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24111719	24111807	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000640:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24111719	24111807	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000640:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24111808	24111893	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000640:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24111894	24112004	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000640:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24111894	24112004	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000640:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24112005	24112927	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000640:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24112928	24113038	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000640:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24112928	24113038	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000640:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24113039	24113472	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000640:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24113473	24113583	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000640:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24113473	24113583	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000640:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24113584	24114023	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000640:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24114024	24114134	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000640:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24114024	24114134	.	-	1	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000640:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24114135	24115089	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000640:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24115090	24115204	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000640:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24115090	24115204	.	-	2	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000640:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24115205	24117214	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000640:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24117215	24117367	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000640:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24117215	24117338	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000640:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24117336	24117338	.	-	0	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03521_ch_T0000640;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24117368	24122483	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000640:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24122484	24122575	.	-	.	source_transcript=hg002_chrY_paternal_489.2;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000640;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000640;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000640:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	24110731	24125201	100	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_G0000226;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03521_ch_T0000641;Name=RBMY1J
HG03521_chrY	CAT	exon	24110731	24111307	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24111009	24111307	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24111009	24111011	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03521_ch_T0000641;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24111308	24111718	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24111719	24111807	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24111719	24111807	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24111808	24111893	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24111894	24112004	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24111894	24112004	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24112005	24112927	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24112928	24113038	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24112928	24113038	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24113039	24113472	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24113473	24113583	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24113473	24113583	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24113584	24114023	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24114024	24114134	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24114024	24114134	.	-	1	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24114135	24115089	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24115090	24115204	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24115090	24115204	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24115205	24117214	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24117215	24117367	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24117215	24117367	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24117368	24119282	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24119283	24119460	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24119283	24119460	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24119461	24122483	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24122484	24122587	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24122484	24122587	.	-	2	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24122588	24123053	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24123054	24123166	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24123054	24123162	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000641:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24123160	24123162	.	-	0	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03521_ch_T0000641;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24123167	24125027	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000641:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24125028	24125201	.	-	.	source_transcript=hg002_chrY_paternal_489.3;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000641;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000641;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000641:11;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	24110731	24125201	100	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_G0000226;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=HG03521_ch_T0000642;Name=RBMY1J
HG03521_chrY	CAT	exon	24110731	24111307	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24111009	24111307	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000642:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24111009	24111011	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=stop_codon:HG03521_ch_T0000642;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24111308	24111718	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000642:0;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24111719	24111807	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24111719	24111807	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000642:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24111808	24112927	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000642:1;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24112928	24113038	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24112928	24113038	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000642:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24113039	24113472	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000642:2;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24113473	24113583	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24113473	24113583	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000642:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24113584	24114023	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000642:3;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24114024	24114134	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24114024	24114134	.	-	1	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000642:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24114135	24115089	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000642:4;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24115090	24115204	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24115090	24115204	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000642:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24115205	24117214	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000642:5;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24117215	24117367	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24117215	24117367	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000642:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24117368	24119282	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000642:6;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24119283	24119460	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24119283	24119460	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000642:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24119461	24122483	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000642:7;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24122484	24122587	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24122484	24122587	.	-	2	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000642:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24122588	24123053	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000642:8;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24123054	24123166	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24123054	24123162	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=CDS:HG03521_ch_T0000642:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24123160	24123162	.	-	0	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=start_codon:HG03521_ch_T0000642;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24123167	24125027	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=intron:HG03521_ch_T0000642:9;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24125028	24125201	.	-	.	source_transcript=hg002_chrY_paternal_489.4;source_transcript_name=hg002_chrY_paternal_489.4;source_gene=hg002_chrY_paternal_489;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_489;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_489.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_489.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1J;alternative_source_transcripts=hg002_chrY_paternal_489.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000642;gene_id=HG03521_ch_G0000226;Parent=HG03521_ch_T0000642;transcript_name=hg002_chrY_paternal_489.4;gene_name=RBMY1J;ID=exon:HG03521_ch_T0000642:10;Name=RBMY1J;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24238962	24241040	.	-	.	source_gene_common_name=TTTY5;source_gene=hg002_chrY_paternal_497;alternative_source_transcripts=hg002_chrY_paternal_497.1;gene_id=HG03521_ch_G0000227;gene_biotype=lncRNA;gene_name=TTTY5;gene_sources=liftoff;ID=HG03521_ch_G0000227;Name=TTTY5
HG03521_chrY	CAT	transcript	24238962	24241040	1000	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG03521_ch_T0000643;gene_id=HG03521_ch_G0000227;Parent=HG03521_ch_G0000227;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=HG03521_ch_T0000643;Name=TTTY5
HG03521_chrY	CAT	exon	24238962	24239952	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG03521_ch_T0000643;gene_id=HG03521_ch_G0000227;Parent=HG03521_ch_T0000643;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG03521_ch_T0000643:0;Name=TTTY5;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24239953	24240469	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG03521_ch_T0000643;gene_id=HG03521_ch_G0000227;Parent=HG03521_ch_T0000643;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=intron:HG03521_ch_T0000643:0;Name=TTTY5;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24240470	24241040	.	-	.	source_transcript=hg002_chrY_paternal_497.1;source_transcript_name=hg002_chrY_paternal_497.1;source_gene=hg002_chrY_paternal_497;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_497;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_497.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_497.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY5;alternative_source_transcripts=hg002_chrY_paternal_497.1;transcript_id=HG03521_ch_T0000643;gene_id=HG03521_ch_G0000227;Parent=HG03521_ch_T0000643;transcript_name=hg002_chrY_paternal_497.1;gene_name=TTTY5;ID=exon:HG03521_ch_T0000643:1;Name=TTTY5;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24251041	24258387	.	+	.	source_gene_common_name=RBMY2FP;source_gene=hg002_chrY_paternal_495;alternative_source_transcripts=hg002_chrY_paternal_495.1;gene_id=HG03521_ch_G0000228;gene_biotype=transcribed_pseudogene;gene_name=RBMY2FP;gene_sources=liftoff;ID=HG03521_ch_G0000228;Name=RBMY2FP
HG03521_chrY	CAT	transcript	24251041	24258387	1000	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03521_ch_T0000644;gene_id=HG03521_ch_G0000228;Parent=HG03521_ch_G0000228;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=HG03521_ch_T0000644;Name=RBMY2FP
HG03521_chrY	CAT	exon	24251041	24251152	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03521_ch_T0000644;gene_id=HG03521_ch_G0000228;Parent=HG03521_ch_T0000644;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03521_ch_T0000644:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24251153	24253041	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03521_ch_T0000644;gene_id=HG03521_ch_G0000228;Parent=HG03521_ch_T0000644;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG03521_ch_T0000644:0;Name=RBMY2FP;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24253042	24253154	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03521_ch_T0000644;gene_id=HG03521_ch_G0000228;Parent=HG03521_ch_T0000644;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03521_ch_T0000644:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24253155	24253576	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03521_ch_T0000644;gene_id=HG03521_ch_G0000228;Parent=HG03521_ch_T0000644;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG03521_ch_T0000644:1;Name=RBMY2FP;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24253577	24253680	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03521_ch_T0000644;gene_id=HG03521_ch_G0000228;Parent=HG03521_ch_T0000644;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03521_ch_T0000644:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24253681	24256674	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03521_ch_T0000644;gene_id=HG03521_ch_G0000228;Parent=HG03521_ch_T0000644;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=intron:HG03521_ch_T0000644:2;Name=RBMY2FP;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24256675	24258387	.	+	.	source_transcript=hg002_chrY_paternal_495.1;source_transcript_name=hg002_chrY_paternal_495.1;source_gene=hg002_chrY_paternal_495;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_495;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_495.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_495.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY2FP;alternative_source_transcripts=hg002_chrY_paternal_495.1;transcript_id=HG03521_ch_T0000644;gene_id=HG03521_ch_G0000228;Parent=HG03521_ch_T0000644;transcript_name=hg002_chrY_paternal_495.1;gene_name=RBMY2FP;ID=exon:HG03521_ch_T0000644:3;Name=RBMY2FP;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24258860	24262566	.	+	.	source_gene_common_name=LOC100652931;source_gene=hg002_chrY_paternal_494;alternative_source_transcripts=hg002_chrY_paternal_494.1;gene_id=HG03521_ch_G0000229;gene_biotype=transcribed_pseudogene;gene_name=LOC100652931;gene_sources=liftoff;ID=HG03521_ch_G0000229;Name=LOC100652931
HG03521_chrY	CAT	transcript	24258860	24262566	1000	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03521_ch_T0000645;gene_id=HG03521_ch_G0000229;Parent=HG03521_ch_G0000229;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=HG03521_ch_T0000645;Name=LOC100652931
HG03521_chrY	CAT	exon	24258860	24258929	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03521_ch_T0000645;gene_id=HG03521_ch_G0000229;Parent=HG03521_ch_T0000645;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG03521_ch_T0000645:0;Name=LOC100652931;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24258930	24260964	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03521_ch_T0000645;gene_id=HG03521_ch_G0000229;Parent=HG03521_ch_T0000645;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG03521_ch_T0000645:0;Name=LOC100652931;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24260965	24261079	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03521_ch_T0000645;gene_id=HG03521_ch_G0000229;Parent=HG03521_ch_T0000645;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG03521_ch_T0000645:1;Name=LOC100652931;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24261080	24262544	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03521_ch_T0000645;gene_id=HG03521_ch_G0000229;Parent=HG03521_ch_T0000645;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=intron:HG03521_ch_T0000645:1;Name=LOC100652931;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24262545	24262566	.	+	.	source_transcript=hg002_chrY_paternal_494.1;source_transcript_name=hg002_chrY_paternal_494.1;source_gene=hg002_chrY_paternal_494;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_494;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_494.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_494.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC100652931;alternative_source_transcripts=hg002_chrY_paternal_494.1;transcript_id=HG03521_ch_T0000645;gene_id=HG03521_ch_G0000229;Parent=HG03521_ch_T0000645;transcript_name=hg002_chrY_paternal_494.1;gene_name=LOC100652931;ID=exon:HG03521_ch_T0000645:2;Name=LOC100652931;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24345670	24365712	.	+	.	source_gene_common_name=RBMY1F;source_gene=hg002_chrY_paternal_502;alternative_source_transcripts=hg002_chrY_paternal_502.1;gene_id=HG03521_ch_G0000230;gene_biotype=protein_coding;gene_name=RBMY1F;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000230;Name=RBMY1F
HG03521_chrY	CAT	transcript	24345670	24360055	100	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_G0000230;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03521_ch_T0000646;Name=RBMY1F
HG03521_chrY	CAT	exon	24345670	24345758	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24345759	24347619	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24347620	24347732	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24347624	24347732	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24347624	24347626	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03521_ch_T0000646;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24347733	24348198	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24348199	24348302	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24348199	24348302	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24348303	24351325	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24351326	24351503	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24351326	24351503	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24351504	24353418	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24353419	24353571	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24353419	24353571	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24353572	24355581	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24355582	24355696	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24355582	24355696	.	+	2	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24355697	24356651	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24356652	24356762	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24356652	24356762	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24356763	24357202	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357203	24357313	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357203	24357313	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357314	24357747	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357748	24357858	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357748	24357858	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357859	24358781	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24358782	24358892	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24358782	24358892	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24358893	24358978	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24358979	24359062	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24358979	24359062	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24359063	24359478	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000646:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24359479	24360055	.	+	.	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000646:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24359479	24359551	.	+	1	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000646:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24359549	24359551	.	+	0	source_transcript=hg002_chrY_paternal_502.1;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000646;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000646;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03521_ch_T0000646;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	24345670	24360055	100	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_G0000230;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03521_ch_T0000647;Name=RBMY1F
HG03521_chrY	CAT	exon	24345670	24345758	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24345759	24347619	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000647:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24347620	24347732	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24347624	24347732	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000647:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24347624	24347626	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03521_ch_T0000647;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24347733	24348198	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000647:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24348199	24348302	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24348199	24348302	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000647:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24348303	24351325	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000647:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24351326	24351503	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24351326	24351503	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000647:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24351504	24353418	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000647:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24353419	24353571	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24353419	24353571	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000647:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24353572	24355581	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000647:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24355582	24355696	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24355582	24355696	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000647:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24355697	24356651	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000647:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24356652	24356762	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24356652	24356762	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000647:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24356763	24357202	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000647:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357203	24357313	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357203	24357313	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000647:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357314	24357747	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000647:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357748	24357858	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357748	24357858	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000647:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357859	24358978	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000647:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24358979	24359067	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24358979	24359067	.	+	1	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000647:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24359068	24359478	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000647:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24359479	24360055	.	+	.	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000647:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24359479	24359777	.	+	2	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000647:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24359775	24359777	.	+	0	source_transcript=hg002_chrY_paternal_502.2;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000647;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000647;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03521_ch_T0000647;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	24345670	24360055	100	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_G0000230;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03521_ch_T0000648;Name=RBMY1F
HG03521_chrY	CAT	exon	24345670	24345758	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24345759	24347619	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24347620	24347732	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24347624	24347732	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24347624	24347626	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03521_ch_T0000648;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24347733	24348198	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24348199	24348302	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24348199	24348302	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24348303	24351325	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24351326	24351503	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24351326	24351503	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24351504	24353418	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24353419	24353571	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24353419	24353571	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24353572	24355581	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24355582	24355696	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24355582	24355696	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24355697	24356651	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24356652	24356762	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24356652	24356762	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24356763	24357202	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357203	24357313	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357203	24357313	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357314	24357747	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357748	24357858	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357748	24357858	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357859	24358781	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24358782	24358892	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24358782	24358892	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24358893	24358978	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24358979	24359067	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24358979	24359067	.	+	1	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24359068	24359478	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000648:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24359479	24360055	.	+	.	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000648:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24359479	24359777	.	+	2	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000648:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24359775	24359777	.	+	0	source_transcript=hg002_chrY_paternal_502.3;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000648;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000648;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03521_ch_T0000648;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	24345670	24365712	100	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_G0000230;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03521_ch_T0000649;Name=RBMY1F
HG03521_chrY	CAT	exon	24345670	24345758	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24345759	24347619	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24347620	24347732	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24347624	24347732	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24347624	24347626	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03521_ch_T0000649;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24347733	24348198	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24348199	24348302	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24348199	24348302	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24348303	24351325	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24351326	24351503	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24351326	24351503	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24351504	24353418	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24353419	24353571	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24353419	24353571	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24353572	24355581	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24355582	24355696	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24355582	24355696	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24355697	24356651	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24356652	24356762	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24356652	24356762	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24356763	24357202	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357203	24357313	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357203	24357313	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357314	24357747	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357748	24357858	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357748	24357858	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357859	24358781	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24358782	24358892	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24358782	24358892	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24358893	24358978	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24358979	24359067	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24358979	24359067	.	+	1	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24359068	24362800	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24362801	24362947	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24362801	24362947	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24362948	24365540	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000649:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24365541	24365712	.	+	.	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000649:12;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24365541	24365551	.	+	2	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000649:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24365549	24365551	.	+	0	source_transcript=hg002_chrY_paternal_502.4;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000649;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000649;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03521_ch_T0000649;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	24345670	24365712	100	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_G0000230;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03521_ch_T0000650;Name=RBMY1F
HG03521_chrY	CAT	exon	24345670	24345758	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24345759	24347619	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24347620	24347732	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24347624	24347732	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24347624	24347626	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03521_ch_T0000650;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24347733	24348198	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24348199	24348302	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24348199	24348302	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24348303	24351325	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24351326	24351503	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24351326	24351503	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24351504	24353418	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24353419	24353571	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24353419	24353571	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24353572	24355581	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24355582	24355696	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24355582	24355696	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24355697	24356651	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24356652	24356762	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24356652	24356762	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24356763	24357202	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357203	24357313	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357203	24357313	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357314	24357747	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357748	24357858	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357748	24357858	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357859	24358978	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24358979	24359067	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24358979	24359067	.	+	1	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24359068	24362800	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24362801	24362947	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24362801	24362947	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24362948	24365540	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000650:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24365541	24365712	.	+	.	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000650:11;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24365541	24365551	.	+	2	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000650:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24365549	24365551	.	+	0	source_transcript=hg002_chrY_paternal_502.5;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.5;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000650;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000650;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03521_ch_T0000650;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	24345670	24365712	100	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_G0000230;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=HG03521_ch_T0000651;Name=RBMY1F
HG03521_chrY	CAT	exon	24345670	24345758	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24345759	24347619	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000651:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24347620	24347732	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24347624	24347732	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000651:0;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24347624	24347626	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=start_codon:HG03521_ch_T0000651;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24347733	24348198	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000651:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24348199	24348302	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24348199	24348302	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000651:1;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24348303	24351325	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000651:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24351326	24351503	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24351326	24351503	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000651:2;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24351504	24353418	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000651:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24353419	24353571	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24353419	24353571	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000651:3;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24353572	24355581	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000651:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24355582	24355696	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24355582	24355696	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000651:4;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24355697	24356651	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000651:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24356652	24356762	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24356652	24356762	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000651:5;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24356763	24357202	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000651:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357203	24357313	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357203	24357313	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000651:6;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357314	24357747	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000651:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24357748	24357858	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24357748	24357858	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000651:7;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24357859	24358978	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000651:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24358979	24359067	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24358979	24359067	.	+	1	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000651:8;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24359068	24365540	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=intron:HG03521_ch_T0000651:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24365541	24365712	.	+	.	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=exon:HG03521_ch_T0000651:10;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24365541	24365551	.	+	2	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=CDS:HG03521_ch_T0000651:9;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24365549	24365551	.	+	0	source_transcript=hg002_chrY_paternal_502.6;source_transcript_name=hg002_chrY_paternal_502.6;source_gene=hg002_chrY_paternal_502;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_502;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_502.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_502.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=RBMY1F;alternative_source_transcripts=hg002_chrY_paternal_502.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000651;gene_id=HG03521_ch_G0000230;Parent=HG03521_ch_T0000651;transcript_name=hg002_chrY_paternal_502.6;gene_name=RBMY1F;ID=stop_codon:HG03521_ch_T0000651;Name=RBMY1F;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24381115	24426899	.	+	.	source_gene_common_name=LOC101929148;source_gene=hg002_chrY_paternal_503;alternative_source_transcripts=hg002_chrY_paternal_503.1;gene_id=HG03521_ch_G0000231;gene_biotype=lncRNA;gene_name=LOC101929148;gene_sources=liftoff;ID=HG03521_ch_G0000231;Name=LOC101929148
HG03521_chrY	CAT	transcript	24381115	24426899	1000	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_G0000231;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=HG03521_ch_T0000652;Name=LOC101929148
HG03521_chrY	CAT	exon	24381115	24381315	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:0;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24381316	24381649	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:0;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24381650	24381959	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:1;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24381960	24388501	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:1;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24388502	24388642	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:2;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24388643	24398614	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:2;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24398615	24398837	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:3;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24398838	24399145	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:3;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24399146	24399231	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:4;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24399232	24406409	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:4;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24406410	24406528	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:5;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24406529	24406958	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:5;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24406959	24407312	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:6;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24407313	24420949	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:6;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24420950	24421039	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:7;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24421040	24422505	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:7;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24422506	24422841	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:8;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24422842	24424641	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:8;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24424642	24424727	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:9;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24424728	24424847	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:9;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24424848	24425044	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:10;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24425045	24425588	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:10;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24425589	24425706	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:11;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24425707	24426221	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=intron:HG03521_ch_T0000652:11;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24426222	24426899	.	+	.	source_transcript=hg002_chrY_paternal_503.1;source_transcript_name=hg002_chrY_paternal_503.1;source_gene=hg002_chrY_paternal_503;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_503;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_503.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_503.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101929148;alternative_source_transcripts=hg002_chrY_paternal_503.1;transcript_id=HG03521_ch_T0000652;gene_id=HG03521_ch_G0000231;Parent=HG03521_ch_T0000652;transcript_name=hg002_chrY_paternal_503.1;gene_name=LOC101929148;ID=exon:HG03521_ch_T0000652:12;Name=LOC101929148;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24381768	24383634	.	-	.	source_gene_common_name=TTTY6;source_gene=hg002_chrY_paternal_504;alternative_source_transcripts=hg002_chrY_paternal_504.1;gene_id=HG03521_ch_G0000232;gene_biotype=lncRNA;gene_name=TTTY6;gene_sources=liftoff;ID=HG03521_ch_G0000232;Name=TTTY6
HG03521_chrY	CAT	transcript	24381768	24383634	1000	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG03521_ch_T0000653;gene_id=HG03521_ch_G0000232;Parent=HG03521_ch_G0000232;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=HG03521_ch_T0000653;Name=TTTY6
HG03521_chrY	CAT	exon	24381768	24382006	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG03521_ch_T0000653;gene_id=HG03521_ch_G0000232;Parent=HG03521_ch_T0000653;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG03521_ch_T0000653:0;Name=TTTY6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24382007	24383163	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG03521_ch_T0000653;gene_id=HG03521_ch_G0000232;Parent=HG03521_ch_T0000653;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG03521_ch_T0000653:0;Name=TTTY6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24383164	24383301	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG03521_ch_T0000653;gene_id=HG03521_ch_G0000232;Parent=HG03521_ch_T0000653;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG03521_ch_T0000653:1;Name=TTTY6;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24383302	24383519	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG03521_ch_T0000653;gene_id=HG03521_ch_G0000232;Parent=HG03521_ch_T0000653;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=intron:HG03521_ch_T0000653:1;Name=TTTY6;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24383520	24383634	.	-	.	source_transcript=hg002_chrY_paternal_504.1;source_transcript_name=hg002_chrY_paternal_504.1;source_gene=hg002_chrY_paternal_504;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_504;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_504.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_504.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY6;alternative_source_transcripts=hg002_chrY_paternal_504.1;transcript_id=HG03521_ch_T0000653;gene_id=HG03521_ch_G0000232;Parent=HG03521_ch_T0000653;transcript_name=hg002_chrY_paternal_504.1;gene_name=TTTY6;ID=exon:HG03521_ch_T0000653:2;Name=TTTY6;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24432585	24456825	.	+	.	source_gene_common_name=PRY2;source_gene=hg002_chrY_paternal_505;alternative_source_transcripts=hg002_chrY_paternal_505.1;gene_id=HG03521_ch_G0000233;gene_biotype=protein_coding;gene_name=PRY2;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000233;Name=PRY2
HG03521_chrY	CAT	transcript	24432585	24456825	100	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_G0000233;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=HG03521_ch_T0000654;Name=PRY2
HG03521_chrY	CAT	exon	24432585	24432672	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03521_ch_T0000654:0;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24432673	24432773	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03521_ch_T0000654:0;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24432774	24432860	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03521_ch_T0000654:1;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24432861	24443702	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03521_ch_T0000654:1;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24443703	24443823	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03521_ch_T0000654:2;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24443755	24443823	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG03521_ch_T0000654:0;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24443755	24443757	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=start_codon:HG03521_ch_T0000654;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24443824	24446398	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03521_ch_T0000654:2;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24446399	24446514	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03521_ch_T0000654:3;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24446399	24446514	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG03521_ch_T0000654:1;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24446515	24455999	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=intron:HG03521_ch_T0000654:3;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24456000	24456825	.	+	.	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=exon:HG03521_ch_T0000654:4;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24456000	24456258	.	+	1	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=CDS:HG03521_ch_T0000654:2;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24456256	24456258	.	+	0	source_transcript=hg002_chrY_paternal_505.1;source_transcript_name=hg002_chrY_paternal_505.1;source_gene=hg002_chrY_paternal_505;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_505;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_505.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_505.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=PRY2;alternative_source_transcripts=hg002_chrY_paternal_505.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000654;gene_id=HG03521_ch_G0000233;Parent=HG03521_ch_T0000654;transcript_name=hg002_chrY_paternal_505.1;gene_name=PRY2;ID=stop_codon:HG03521_ch_T0000654;Name=PRY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24498234	24500231	.	-	.	source_gene_common_name=LOC107987357;source_gene=hg002_chrY_paternal_510;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;gene_id=HG03521_ch_G0000234;gene_biotype=lncRNA;gene_name=LOC107987357;gene_sources=liftoff;ID=HG03521_ch_G0000234;Name=LOC107987357
HG03521_chrY	CAT	transcript	24498234	24500231	1000	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03521_ch_T0000655;gene_id=HG03521_ch_G0000234;Parent=HG03521_ch_G0000234;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=HG03521_ch_T0000655;Name=LOC107987357
HG03521_chrY	CAT	exon	24498234	24498435	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03521_ch_T0000655;gene_id=HG03521_ch_G0000234;Parent=HG03521_ch_T0000655;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG03521_ch_T0000655:0;Name=LOC107987357;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24498436	24499970	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03521_ch_T0000655;gene_id=HG03521_ch_G0000234;Parent=HG03521_ch_T0000655;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG03521_ch_T0000655:0;Name=LOC107987357;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24499971	24500031	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03521_ch_T0000655;gene_id=HG03521_ch_G0000234;Parent=HG03521_ch_T0000655;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG03521_ch_T0000655:1;Name=LOC107987357;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24500032	24500148	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03521_ch_T0000655;gene_id=HG03521_ch_G0000234;Parent=HG03521_ch_T0000655;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=intron:HG03521_ch_T0000655:1;Name=LOC107987357;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24500149	24500231	.	-	.	source_transcript=hg002_chrY_paternal_510.1;source_transcript_name=hg002_chrY_paternal_510.1;source_gene=hg002_chrY_paternal_510;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_510;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_510.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_510.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987357;alternative_source_transcripts=hg002_chrY_paternal_510.1,hg002_chrY_paternal_510.1;transcript_id=HG03521_ch_T0000655;gene_id=HG03521_ch_G0000234;Parent=HG03521_ch_T0000655;transcript_name=hg002_chrY_paternal_510.1;gene_name=LOC107987357;ID=exon:HG03521_ch_T0000655:2;Name=LOC107987357;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24728409	24739647	.	+	.	source_gene_common_name=LOC107987348;source_gene=hg002_chrY_paternal_515;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;gene_id=HG03521_ch_G0000235;gene_biotype=lncRNA;gene_name=LOC107987348;gene_sources=liftoff;ID=HG03521_ch_G0000235;Name=LOC107987348
HG03521_chrY	CAT	transcript	24728409	24739647	1000	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03521_ch_T0000656;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_G0000235;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG03521_ch_T0000656;Name=LOC107987348
HG03521_chrY	CAT	exon	24728409	24728864	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03521_ch_T0000656;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_T0000656;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03521_ch_T0000656:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24728865	24734834	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03521_ch_T0000656;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_T0000656;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03521_ch_T0000656:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24734835	24736999	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03521_ch_T0000656;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_T0000656;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03521_ch_T0000656:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24737000	24737640	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03521_ch_T0000656;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_T0000656;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03521_ch_T0000656:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24737641	24739647	.	+	.	source_transcript=hg002_chrY_paternal_515.1;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.1,hg002_chrY_paternal_515.1;transcript_id=HG03521_ch_T0000656;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_T0000656;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03521_ch_T0000656:2;Name=LOC107987348;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	24728409	24739647	1000	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03521_ch_T0000657;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_G0000235;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=HG03521_ch_T0000657;Name=LOC107987348
HG03521_chrY	CAT	exon	24728409	24728864	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03521_ch_T0000657;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_T0000657;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03521_ch_T0000657:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24728865	24734366	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03521_ch_T0000657;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_T0000657;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03521_ch_T0000657:0;Name=LOC107987348;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24734367	24736999	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03521_ch_T0000657;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_T0000657;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03521_ch_T0000657:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24737000	24737640	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03521_ch_T0000657;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_T0000657;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=intron:HG03521_ch_T0000657:1;Name=LOC107987348;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24737641	24739647	.	+	.	source_transcript=hg002_chrY_paternal_515.2;source_transcript_name=hg002_chrY_paternal_515.1;source_gene=hg002_chrY_paternal_515;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_515;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_515.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_515.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987348;alternative_source_transcripts=hg002_chrY_paternal_515.2,hg002_chrY_paternal_515.2;transcript_id=HG03521_ch_T0000657;gene_id=HG03521_ch_G0000235;Parent=HG03521_ch_T0000657;transcript_name=hg002_chrY_paternal_515.1;gene_name=LOC107987348;ID=exon:HG03521_ch_T0000657:2;Name=LOC107987348;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24793782	24794913	.	+	.	source_gene_common_name=TTTY17C;source_gene=hg002_chrY_paternal_537;alternative_source_transcripts=hg002_chrY_paternal_516.1;gene_id=HG03521_ch_G0000236;gene_biotype=lncRNA;gene_name=TTTY17C;gene_sources=liftoff;ID=HG03521_ch_G0000236;Name=TTTY17C
HG03521_chrY	CAT	transcript	24793782	24794913	1000	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG03521_ch_T0000658;gene_id=HG03521_ch_G0000236;Parent=HG03521_ch_G0000236;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=HG03521_ch_T0000658;Name=TTTY17C
HG03521_chrY	CAT	exon	24793782	24793841	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG03521_ch_T0000658;gene_id=HG03521_ch_G0000236;Parent=HG03521_ch_T0000658;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG03521_ch_T0000658:0;Name=TTTY17C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24793842	24794807	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG03521_ch_T0000658;gene_id=HG03521_ch_G0000236;Parent=HG03521_ch_T0000658;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=intron:HG03521_ch_T0000658:0;Name=TTTY17C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24794808	24794913	.	+	.	source_transcript=hg002_chrY_paternal_537.1;source_transcript_name=hg002_chrY_paternal_537.1;source_gene=hg002_chrY_paternal_537;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_537;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_537.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_537.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17C;alternative_source_transcripts=hg002_chrY_paternal_516.1;transcript_id=HG03521_ch_T0000658;gene_id=HG03521_ch_G0000236;Parent=HG03521_ch_T0000658;transcript_name=hg002_chrY_paternal_537.1;gene_name=TTTY17C;ID=exon:HG03521_ch_T0000658:1;Name=TTTY17C;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24878653	24915465	.	+	.	source_gene_common_name=TTTY4C;source_gene=hg002_chrY_paternal_519;alternative_source_transcripts=hg002_chrY_paternal_519.1;gene_id=HG03521_ch_G0000237;gene_biotype=lncRNA;gene_name=TTTY4C;gene_sources=liftoff;ID=HG03521_ch_G0000237;Name=TTTY4C
HG03521_chrY	CAT	transcript	24878653	24915465	1000	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03521_ch_T0000659;gene_id=HG03521_ch_G0000237;Parent=HG03521_ch_G0000237;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=HG03521_ch_T0000659;Name=TTTY4C
HG03521_chrY	CAT	exon	24878653	24878813	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03521_ch_T0000659;gene_id=HG03521_ch_G0000237;Parent=HG03521_ch_T0000659;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03521_ch_T0000659:0;Name=TTTY4C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24878814	24905808	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03521_ch_T0000659;gene_id=HG03521_ch_G0000237;Parent=HG03521_ch_T0000659;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG03521_ch_T0000659:0;Name=TTTY4C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24905809	24905884	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03521_ch_T0000659;gene_id=HG03521_ch_G0000237;Parent=HG03521_ch_T0000659;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03521_ch_T0000659:1;Name=TTTY4C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24905885	24907688	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03521_ch_T0000659;gene_id=HG03521_ch_G0000237;Parent=HG03521_ch_T0000659;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG03521_ch_T0000659:1;Name=TTTY4C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24907689	24907796	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03521_ch_T0000659;gene_id=HG03521_ch_G0000237;Parent=HG03521_ch_T0000659;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03521_ch_T0000659:2;Name=TTTY4C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24907797	24914464	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03521_ch_T0000659;gene_id=HG03521_ch_G0000237;Parent=HG03521_ch_T0000659;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=intron:HG03521_ch_T0000659:2;Name=TTTY4C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24914465	24915465	.	+	.	source_transcript=hg002_chrY_paternal_519.1;source_transcript_name=hg002_chrY_paternal_519.1;source_gene=hg002_chrY_paternal_519;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_519;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_519.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_519.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4C;alternative_source_transcripts=hg002_chrY_paternal_519.1;transcript_id=HG03521_ch_T0000659;gene_id=HG03521_ch_G0000237;Parent=HG03521_ch_T0000659;transcript_name=hg002_chrY_paternal_519.1;gene_name=TTTY4C;ID=exon:HG03521_ch_T0000659:3;Name=TTTY4C;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	24926444	24947647	.	+	.	source_gene_common_name=BPY2B;source_gene=hg002_chrY_paternal_533;alternative_source_transcripts=hg002_chrY_paternal_520.1;gene_id=HG03521_ch_G0000238;gene_biotype=protein_coding;gene_name=BPY2B;gene_sources=liftoff;ID=HG03521_ch_G0000238;Name=BPY2B
HG03521_chrY	CAT	transcript	24926444	24947647	100	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_G0000238;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=HG03521_ch_T0000660;Name=BPY2B
HG03521_chrY	CAT	exon	24926444	24926474	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03521_ch_T0000660:0;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24926475	24926749	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03521_ch_T0000660:0;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24926750	24926872	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03521_ch_T0000660:1;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24926873	24929937	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03521_ch_T0000660:1;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24929938	24930074	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03521_ch_T0000660:2;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24930075	24934483	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03521_ch_T0000660:2;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24934484	24934602	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03521_ch_T0000660:3;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24934525	24934602	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03521_ch_T0000660:0;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	24934525	24934527	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=start_codon:HG03521_ch_T0000660;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24934603	24936661	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03521_ch_T0000660:3;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24936662	24936779	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03521_ch_T0000660:4;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24936662	24936779	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03521_ch_T0000660:1;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24936780	24939633	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03521_ch_T0000660:4;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24939634	24939739	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03521_ch_T0000660:5;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24939634	24939739	.	+	2	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03521_ch_T0000660:2;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24939740	24940431	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03521_ch_T0000660:5;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24940432	24940556	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03521_ch_T0000660:6;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	24940432	24940450	.	+	1	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=CDS:HG03521_ch_T0000660:3;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	24940448	24940450	.	+	0	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=stop_codon:HG03521_ch_T0000660;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24940557	24947106	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03521_ch_T0000660:6;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24947107	24947231	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03521_ch_T0000660:7;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	24947232	24947325	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=intron:HG03521_ch_T0000660:7;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	24947326	24947647	.	+	.	source_transcript=hg002_chrY_paternal_533.1;source_transcript_name=hg002_chrY_paternal_533.1;source_gene=hg002_chrY_paternal_533;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_533;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_533.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_533.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2B;alternative_source_transcripts=hg002_chrY_paternal_520.1;transcript_id=HG03521_ch_T0000660;gene_id=HG03521_ch_G0000238;Parent=HG03521_ch_T0000660;transcript_name=hg002_chrY_paternal_533.1;gene_name=BPY2B;ID=exon:HG03521_ch_T0000660:8;Name=BPY2B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	25048528	25051865	.	-	.	source_gene_common_name=LOC105377242;source_gene=hg002_chrY_paternal_528;gene_id=HG03521_ch_G0000239;gene_biotype=lncRNA;gene_name=LOC105377242;gene_sources=liftoff;ID=HG03521_ch_G0000239;Name=LOC105377242
HG03521_chrY	CAT	transcript	25048528	25051865	1000	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000661;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_G0000239;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG03521_ch_T0000661;Name=LOC105377242
HG03521_chrY	CAT	exon	25048528	25048628	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000661;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_T0000661;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03521_ch_T0000661:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25048629	25050986	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000661;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_T0000661;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03521_ch_T0000661:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25050987	25051024	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000661;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_T0000661;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03521_ch_T0000661:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25051025	25051686	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000661;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_T0000661;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03521_ch_T0000661:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25051687	25051865	.	-	.	source_transcript=hg002_chrY_paternal_528.2;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000661;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_T0000661;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03521_ch_T0000661:2;Name=LOC105377242;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	25048528	25051865	1000	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000662;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_G0000239;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=HG03521_ch_T0000662;Name=LOC105377242
HG03521_chrY	CAT	exon	25048528	25048628	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000662;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_T0000662;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03521_ch_T0000662:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25048629	25050959	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000662;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_T0000662;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03521_ch_T0000662:0;Name=LOC105377242;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25050960	25051024	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000662;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_T0000662;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03521_ch_T0000662:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25051025	25051686	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000662;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_T0000662;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=intron:HG03521_ch_T0000662:1;Name=LOC105377242;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25051687	25051865	.	-	.	source_transcript=hg002_chrY_paternal_528.1;source_transcript_name=hg002_chrY_paternal_528.1;source_gene=hg002_chrY_paternal_528;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_528;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_528.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_528.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377242;transcript_id=HG03521_ch_T0000662;gene_id=HG03521_ch_G0000239;Parent=HG03521_ch_T0000662;transcript_name=hg002_chrY_paternal_528.1;gene_name=LOC105377242;ID=exon:HG03521_ch_T0000662:2;Name=LOC105377242;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	25071485	25141143	.	-	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;gene_id=HG03521_ch_G0000240;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=augTM,transMap;ID=HG03521_ch_G0000240;Name=DAZ3
HG03521_chrY	CAT	transcript	25071485	25141143	9950	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_G0000240;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG03521_ch_T0000663;Name=DAZ3
HG03521_chrY	CAT	exon	25071485	25073341	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:0;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25073342	25077304	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:0;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25077305	25077403	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:1;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25077340	25077403	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:0;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	25077340	25077342	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG03521_ch_T0000663;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25077404	25081976	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:1;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25081977	25082011	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:2;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25081977	25082011	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:1;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25082012	25082755	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:2;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25082756	25082827	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:3;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25082756	25082827	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:2;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25082828	25094926	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:3;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25094927	25094998	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:4;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25094927	25094998	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:3;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25094999	25097303	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:4;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25097304	25097375	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:5;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25097304	25097375	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:4;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25097376	25099699	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:5;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25099700	25099771	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:6;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25099700	25099771	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:5;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25099772	25102082	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:6;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25102083	25102154	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:7;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25102083	25102154	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:6;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25102155	25104478	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:7;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25104479	25104550	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:8;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25104479	25104550	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:7;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25104551	25106869	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:8;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25106870	25106941	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:9;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25106870	25106941	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:8;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25106942	25109314	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:9;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25109315	25109386	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:10;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25109315	25109386	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:9;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25109387	25121632	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:10;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25121633	25121772	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:11;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25121633	25121772	.	-	2	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:10;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25121773	25121861	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:11;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25121862	25121925	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:12;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25121862	25121925	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:11;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25121926	25122361	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:12;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25122362	25122413	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:13;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25122362	25122413	.	-	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:12;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25122414	25122973	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:13;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25122974	25123065	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:14;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25122974	25123065	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:13;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25123066	25123339	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:14;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25123340	25123486	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:15;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25123340	25123486	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:14;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25123487	25140932	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000663:15;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25140933	25141143	.	-	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000663:16;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25140933	25140935	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000663:15;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	25140933	25140935	.	-	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=277.9548888888889;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000663;gene_id=HG03521_ch_G0000240;Parent=HG03521_ch_T0000663;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG03521_ch_T0000663;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	25161570	25228718	.	+	.	source_gene_common_name=DAZ4;source_gene=hg002_chrY_paternal_527;gene_id=HG03521_ch_G0000241;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=augTM,transMap,transMap_pairwise;ID=HG03521_ch_G0000241;Name=DAZ4
HG03521_chrY	CAT	transcript	25161570	25228718	9950	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_G0000241;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03521_ch_T0000664;Name=DAZ4
HG03521_chrY	CAT	exon	25161570	25161879	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25161877	25161879	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	25161877	25161879	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03521_ch_T0000664;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25161880	25168479	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25168480	25168626	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25168480	25168626	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25168627	25168900	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25168901	25168992	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25168901	25168992	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25168993	25169552	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25169553	25169604	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25169553	25169604	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25169605	25170040	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25170041	25170104	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25170041	25170104	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25170105	25170193	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25170194	25170333	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25170194	25170333	.	+	2	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25170334	25171733	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25171734	25171805	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25171734	25171805	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25171806	25174177	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25174178	25174249	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25174178	25174249	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25174250	25176568	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25176569	25176640	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25176569	25176640	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25176641	25205455	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25205456	25205527	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25205456	25205527	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25205528	25217377	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25217378	25217449	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25217378	25217449	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25217450	25218193	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25218194	25218228	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25218194	25218228	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25218229	25222801	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25222802	25222900	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25222802	25222865	.	+	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000664:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	25222863	25222865	.	+	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03521_ch_T0000664;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25222901	25226861	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000664:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25226862	25228718	.	+	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=285.7561428571429;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000664;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000664;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000664:13;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	25161570	25228718	9940	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_G0000241;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03521_ch_T0000665;Name=DAZ4
HG03521_chrY	CAT	exon	25161570	25161879	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000665:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25161877	25161879	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000665:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	25161877	25161879	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03521_ch_T0000665;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25161880	25171733	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000665:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25171734	25171805	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000665:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25171734	25171805	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000665:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25171806	25174177	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000665:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25174178	25174249	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000665:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25174178	25174249	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000665:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25174250	25176568	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000665:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25176569	25176640	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000665:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25176569	25176640	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000665:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25176641	25217377	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000665:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25217378	25217449	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000665:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25217378	25217449	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000665:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25217450	25218193	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000665:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25218194	25218228	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000665:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25218194	25218228	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000665:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25218229	25222801	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000665:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25222802	25222900	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000665:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25222802	25222865	.	+	1	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000665:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	25222863	25222865	.	+	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03521_ch_T0000665;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25222901	25226861	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000665:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25226862	25228718	.	+	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=271.65999999999997;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000665;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000665;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000665:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	25161669	25228718	9950	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_G0000241;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03521_ch_T0000666;Name=DAZ4
HG03521_chrY	CAT	exon	25161669	25161879	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25161877	25161879	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	25161877	25161879	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03521_ch_T0000666;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25161880	25168479	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25168480	25168626	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25168480	25168626	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25168627	25168900	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25168901	25168992	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25168901	25168992	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25168993	25169552	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25169553	25169604	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25169553	25169604	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25169605	25170040	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25170041	25170104	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25170041	25170104	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25170105	25170193	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25170194	25170333	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25170194	25170333	.	+	2	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25170334	25171733	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25171734	25171805	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25171734	25171805	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25171806	25174177	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25174178	25174249	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25174178	25174249	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25174250	25176568	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25176569	25176640	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25176569	25176640	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25176641	25205455	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25205456	25205527	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25205456	25205527	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25205528	25207840	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25207841	25207912	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25207841	25207912	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25207913	25210225	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25210226	25210297	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25210226	25210297	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25210298	25212609	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25212610	25212681	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25212610	25212681	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25212682	25214993	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25214994	25215065	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:13;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25214994	25215065	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:13;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25215066	25217377	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:13;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25217378	25217449	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:14;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25217378	25217449	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:14;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25217450	25218193	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:14;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25218194	25218228	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:15;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25218194	25218228	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:15;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25218229	25222801	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:15;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25222802	25222900	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:16;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25222802	25222865	.	+	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000666:16;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	25222863	25222865	.	+	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03521_ch_T0000666;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25222901	25226861	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000666:16;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25226862	25228718	.	+	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=288.89744444444443;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;AdditionalSources=augTM,transMap_pairwise;transcript_id=HG03521_ch_T0000666;gene_id=HG03521_ch_G0000241;Parent=HG03521_ch_T0000666;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000666:17;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	25248336	25251673	.	+	.	source_gene_common_name=LOC105377239;source_gene=hg002_chrY_paternal_602;alternative_source_transcripts=hg002_chrY_paternal_528.1;gene_id=HG03521_ch_G0000242;gene_biotype=lncRNA;gene_name=LOC105377239;gene_sources=liftoff;ID=HG03521_ch_G0000242;Name=LOC105377239
HG03521_chrY	CAT	transcript	25248336	25251673	1000	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03521_ch_T0000667;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_G0000242;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG03521_ch_T0000667;Name=LOC105377239
HG03521_chrY	CAT	exon	25248336	25248514	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03521_ch_T0000667;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_T0000667;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03521_ch_T0000667:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25248515	25249176	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03521_ch_T0000667;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_T0000667;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03521_ch_T0000667:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25249177	25249241	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03521_ch_T0000667;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_T0000667;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03521_ch_T0000667:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25249242	25251572	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03521_ch_T0000667;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_T0000667;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03521_ch_T0000667:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25251573	25251673	.	+	.	source_transcript=hg002_chrY_paternal_602.1;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.1;transcript_id=HG03521_ch_T0000667;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_T0000667;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03521_ch_T0000667:2;Name=LOC105377239;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	25248336	25251673	1000	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03521_ch_T0000668;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_G0000242;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=HG03521_ch_T0000668;Name=LOC105377239
HG03521_chrY	CAT	exon	25248336	25248514	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03521_ch_T0000668;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_T0000668;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03521_ch_T0000668:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25248515	25249176	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03521_ch_T0000668;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_T0000668;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03521_ch_T0000668:0;Name=LOC105377239;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25249177	25249214	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03521_ch_T0000668;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_T0000668;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03521_ch_T0000668:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25249215	25251572	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03521_ch_T0000668;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_T0000668;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=intron:HG03521_ch_T0000668:1;Name=LOC105377239;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25251573	25251673	.	+	.	source_transcript=hg002_chrY_paternal_602.2;source_transcript_name=hg002_chrY_paternal_602.1;source_gene=hg002_chrY_paternal_602;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_602;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_602.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_602.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377239;alternative_source_transcripts=hg002_chrY_paternal_528.2;transcript_id=HG03521_ch_T0000668;gene_id=HG03521_ch_G0000242;Parent=HG03521_ch_T0000668;transcript_name=hg002_chrY_paternal_602.1;gene_name=LOC105377239;ID=exon:HG03521_ch_T0000668:2;Name=LOC105377239;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	25360445	25360582	.	-	.	source_gene_common_name=LOC124900506;source_gene=hg002_chrY_paternal_597;alternative_source_transcripts=hg002_chrY_paternal_597.1;gene_id=HG03521_ch_G0000243;gene_biotype=snoRNA;gene_name=LOC124900506;gene_sources=liftoff;ID=HG03521_ch_G0000243;Name=LOC124900506
HG03521_chrY	CAT	transcript	25360445	25360582	1000	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=HG03521_ch_T0000669;gene_id=HG03521_ch_G0000243;Parent=HG03521_ch_G0000243;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=HG03521_ch_T0000669;Name=LOC124900506
HG03521_chrY	CAT	exon	25360445	25360582	.	-	.	source_transcript=hg002_chrY_paternal_597.1;source_transcript_name=hg002_chrY_paternal_597.1;source_gene=hg002_chrY_paternal_597;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_597;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_597.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_597.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900506;alternative_source_transcripts=hg002_chrY_paternal_597.1;transcript_id=HG03521_ch_T0000669;gene_id=HG03521_ch_G0000243;Parent=HG03521_ch_T0000669;transcript_name=hg002_chrY_paternal_597.1;gene_name=LOC124900506;ID=exon:HG03521_ch_T0000669:0;Name=LOC124900506;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	25372583	25414081	.	+	.	source_gene_common_name=REREP1Y;source_gene=hg002_chrY_paternal_596;alternative_source_transcripts=hg002_chrY_paternal_596.1;gene_id=HG03521_ch_G0000244;gene_biotype=transcribed_pseudogene;gene_name=REREP1Y;gene_sources=liftoff;ID=HG03521_ch_G0000244;Name=REREP1Y
HG03521_chrY	CAT	transcript	25372583	25414081	1000	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03521_ch_T0000670;gene_id=HG03521_ch_G0000244;Parent=HG03521_ch_G0000244;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=HG03521_ch_T0000670;Name=REREP1Y
HG03521_chrY	CAT	exon	25372583	25372985	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03521_ch_T0000670;gene_id=HG03521_ch_G0000244;Parent=HG03521_ch_T0000670;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG03521_ch_T0000670:0;Name=REREP1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25372986	25399802	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03521_ch_T0000670;gene_id=HG03521_ch_G0000244;Parent=HG03521_ch_T0000670;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG03521_ch_T0000670:0;Name=REREP1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25399803	25399875	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03521_ch_T0000670;gene_id=HG03521_ch_G0000244;Parent=HG03521_ch_T0000670;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG03521_ch_T0000670:1;Name=REREP1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25399876	25409491	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03521_ch_T0000670;gene_id=HG03521_ch_G0000244;Parent=HG03521_ch_T0000670;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=intron:HG03521_ch_T0000670:1;Name=REREP1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25409492	25414081	.	+	.	source_transcript=hg002_chrY_paternal_596.1;source_transcript_name=hg002_chrY_paternal_596.1;source_gene=hg002_chrY_paternal_596;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_596;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_596.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_596.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP1Y;alternative_source_transcripts=hg002_chrY_paternal_596.1;transcript_id=HG03521_ch_T0000670;gene_id=HG03521_ch_G0000244;Parent=HG03521_ch_T0000670;transcript_name=hg002_chrY_paternal_596.1;gene_name=REREP1Y;ID=exon:HG03521_ch_T0000670:2;Name=REREP1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	25574988	25578112	.	+	.	source_gene_common_name=LOC107987349;source_gene=hg002_chrY_paternal_593;alternative_source_transcripts=hg002_chrY_paternal_593.1;gene_id=HG03521_ch_G0000245;gene_biotype=lncRNA;gene_name=LOC107987349;gene_sources=liftoff;ID=HG03521_ch_G0000245;Name=LOC107987349
HG03521_chrY	CAT	transcript	25574988	25578112	1000	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03521_ch_T0000671;gene_id=HG03521_ch_G0000245;Parent=HG03521_ch_G0000245;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=HG03521_ch_T0000671;Name=LOC107987349
HG03521_chrY	CAT	exon	25574988	25575070	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03521_ch_T0000671;gene_id=HG03521_ch_G0000245;Parent=HG03521_ch_T0000671;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG03521_ch_T0000671:0;Name=LOC107987349;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25575071	25575187	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03521_ch_T0000671;gene_id=HG03521_ch_G0000245;Parent=HG03521_ch_T0000671;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG03521_ch_T0000671:0;Name=LOC107987349;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25575188	25575248	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03521_ch_T0000671;gene_id=HG03521_ch_G0000245;Parent=HG03521_ch_T0000671;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG03521_ch_T0000671:1;Name=LOC107987349;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25575249	25576783	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03521_ch_T0000671;gene_id=HG03521_ch_G0000245;Parent=HG03521_ch_T0000671;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=intron:HG03521_ch_T0000671:1;Name=LOC107987349;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25576784	25578112	.	+	.	source_transcript=hg002_chrY_paternal_593.1;source_transcript_name=hg002_chrY_paternal_593.1;source_gene=hg002_chrY_paternal_593;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_593;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_593.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_593.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987349;alternative_source_transcripts=hg002_chrY_paternal_593.1;transcript_id=HG03521_ch_T0000671;gene_id=HG03521_ch_G0000245;Parent=HG03521_ch_T0000671;transcript_name=hg002_chrY_paternal_593.1;gene_name=LOC107987349;ID=exon:HG03521_ch_T0000671:2;Name=LOC107987349;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	25874034	25878929	.	-	.	source_gene_common_name=TTTY3;source_gene=hg002_chrY_paternal_572;alternative_source_transcripts=hg002_chrY_paternal_572.1;gene_id=HG03521_ch_G0000246;gene_biotype=lncRNA;gene_name=TTTY3;gene_sources=liftoff;ID=HG03521_ch_G0000246;Name=TTTY3
HG03521_chrY	CAT	transcript	25874034	25878929	1000	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03521_ch_T0000672;gene_id=HG03521_ch_G0000246;Parent=HG03521_ch_G0000246;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=HG03521_ch_T0000672;Name=TTTY3
HG03521_chrY	CAT	exon	25874034	25874138	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03521_ch_T0000672;gene_id=HG03521_ch_G0000246;Parent=HG03521_ch_T0000672;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG03521_ch_T0000672:0;Name=TTTY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25874139	25876492	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03521_ch_T0000672;gene_id=HG03521_ch_G0000246;Parent=HG03521_ch_T0000672;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG03521_ch_T0000672:0;Name=TTTY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25876493	25876627	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03521_ch_T0000672;gene_id=HG03521_ch_G0000246;Parent=HG03521_ch_T0000672;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG03521_ch_T0000672:1;Name=TTTY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25876628	25878825	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03521_ch_T0000672;gene_id=HG03521_ch_G0000246;Parent=HG03521_ch_T0000672;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=intron:HG03521_ch_T0000672:1;Name=TTTY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25878826	25878929	.	-	.	source_transcript=hg002_chrY_paternal_572.1;source_transcript_name=hg002_chrY_paternal_572.1;source_gene=hg002_chrY_paternal_572;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_572;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_572.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_572.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3;alternative_source_transcripts=hg002_chrY_paternal_572.1;transcript_id=HG03521_ch_T0000672;gene_id=HG03521_ch_G0000246;Parent=HG03521_ch_T0000672;transcript_name=hg002_chrY_paternal_572.1;gene_name=TTTY3;ID=exon:HG03521_ch_T0000672:2;Name=TTTY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	25981874	25985270	.	-	.	source_gene_common_name=CDY1;source_gene=hg002_chrY_paternal_638;alternative_source_transcripts=hg002_chrY_paternal_565.3;gene_id=HG03521_ch_G0000247;gene_biotype=protein_coding;gene_name=CDY1;gene_sources=liftoff;ID=HG03521_ch_G0000247;Name=CDY1
HG03521_chrY	CAT	transcript	25981874	25985268	1000	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03521_ch_T0000673;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_G0000247;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=HG03521_ch_T0000673;Name=CDY1
HG03521_chrY	CAT	exon	25981874	25981955	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03521_ch_T0000673;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000673;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG03521_ch_T0000673:0;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25981956	25982730	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03521_ch_T0000673;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000673;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:HG03521_ch_T0000673:0;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25982731	25982930	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03521_ch_T0000673;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000673;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG03521_ch_T0000673:1;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25982931	25983350	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03521_ch_T0000673;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000673;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=intron:HG03521_ch_T0000673:1;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25983351	25985268	.	-	.	source_transcript=hg002_chrY_paternal_638.4;source_transcript_name=hg002_chrY_paternal_638.1;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_638.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.3;transcript_id=HG03521_ch_T0000673;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000673;transcript_name=hg002_chrY_paternal_638.1;gene_name=CDY1;ID=exon:HG03521_ch_T0000673:2;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	25982483	25985270	100	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000674;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_G0000247;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG03521_ch_T0000674;Name=CDY1
HG03521_chrY	CAT	exon	25982483	25982930	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000674;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000674;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03521_ch_T0000674:0;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25982910	25982930	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000674;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000674;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03521_ch_T0000674:0;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	25982910	25982912	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000674;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000674;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG03521_ch_T0000674;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25982931	25983550	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000674;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000674;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG03521_ch_T0000674:0;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25983551	25985270	.	-	.	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000674;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000674;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03521_ch_T0000674:1;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25983551	25984942	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000674;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000674;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03521_ch_T0000674:1;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	25984940	25984942	.	-	0	source_transcript=hg002_chrY_paternal_638.1;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000674;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000674;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG03521_ch_T0000674;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	25982483	25985268	100	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03521_ch_T0000675;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_G0000247;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG03521_ch_T0000675;Name=CDY1
HG03521_chrY	CAT	exon	25982483	25982930	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03521_ch_T0000675;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03521_ch_T0000675:0;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25982858	25982930	.	-	1	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03521_ch_T0000675;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03521_ch_T0000675:0;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	25982858	25982860	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03521_ch_T0000675;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG03521_ch_T0000675;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	25982931	25983350	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03521_ch_T0000675;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=intron:HG03521_ch_T0000675:0;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	25983351	25985268	.	-	.	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03521_ch_T0000675;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03521_ch_T0000675:1;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25983351	25984942	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03521_ch_T0000675;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03521_ch_T0000675:1;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	25984940	25984942	.	-	0	source_transcript=hg002_chrY_paternal_638.3;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;alternative_source_transcripts=hg002_chrY_paternal_565.2;transcript_id=HG03521_ch_T0000675;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000675;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG03521_ch_T0000675;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	25983047	25985268	100	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000676;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_G0000247;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=HG03521_ch_T0000676;Name=CDY1
HG03521_chrY	CAT	exon	25983047	25985268	.	-	.	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000676;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=exon:HG03521_ch_T0000676:0;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	25983320	25984942	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000676;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=CDS:HG03521_ch_T0000676:0;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	25983320	25983322	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000676;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=stop_codon:HG03521_ch_T0000676;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	25984940	25984942	.	-	0	source_transcript=hg002_chrY_paternal_638.2;source_transcript_name=hg002_chrY_paternal_638.4;source_gene=hg002_chrY_paternal_638;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_638;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_638.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_638.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1;transcript_id=HG03521_ch_T0000676;gene_id=HG03521_ch_G0000247;Parent=HG03521_ch_T0000676;transcript_name=hg002_chrY_paternal_638.4;gene_name=CDY1;ID=start_codon:HG03521_ch_T0000676;Name=CDY1;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26120687	26124484	.	-	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=HG03521_ch_G0000248;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=transMap_pairwise;ID=HG03521_ch_G0000248;Name=CSPG4P1Y
HG03521_chrY	CAT	transcript	26120687	26124484	1000	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03521_ch_T0000677;gene_id=HG03521_ch_G0000248;Parent=HG03521_ch_G0000248;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG03521_ch_T0000677;Name=CSPG4P1Y
HG03521_chrY	CAT	exon	26120687	26120758	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03521_ch_T0000677;gene_id=HG03521_ch_G0000248;Parent=HG03521_ch_T0000677;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03521_ch_T0000677:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26120759	26123761	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03521_ch_T0000677;gene_id=HG03521_ch_G0000248;Parent=HG03521_ch_T0000677;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG03521_ch_T0000677:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26123762	26124484	.	-	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=transMap_pairwise;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03521_ch_T0000677;gene_id=HG03521_ch_G0000248;Parent=HG03521_ch_T0000677;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03521_ch_T0000677:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26143675	26145205	.	+	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_626;alternative_source_transcripts=hg002_chrY_paternal_552.1;gene_id=HG03521_ch_G0000249;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG03521_ch_G0000249;Name=LOC102724034
HG03521_chrY	CAT	transcript	26143675	26145205	1000	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03521_ch_T0000678;gene_id=HG03521_ch_G0000249;Parent=HG03521_ch_G0000249;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=HG03521_ch_T0000678;Name=LOC102724034
HG03521_chrY	CAT	exon	26143675	26143700	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03521_ch_T0000678;gene_id=HG03521_ch_G0000249;Parent=HG03521_ch_T0000678;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG03521_ch_T0000678:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26143701	26144388	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03521_ch_T0000678;gene_id=HG03521_ch_G0000249;Parent=HG03521_ch_T0000678;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG03521_ch_T0000678:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26144389	26144513	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03521_ch_T0000678;gene_id=HG03521_ch_G0000249;Parent=HG03521_ch_T0000678;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG03521_ch_T0000678:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26144514	26144781	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03521_ch_T0000678;gene_id=HG03521_ch_G0000249;Parent=HG03521_ch_T0000678;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=intron:HG03521_ch_T0000678:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26144782	26145205	.	+	.	source_transcript=hg002_chrY_paternal_626.1;source_transcript_name=hg002_chrY_paternal_626.1;source_gene=hg002_chrY_paternal_626;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_626;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_626.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_626.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_552.1;transcript_id=HG03521_ch_T0000678;gene_id=HG03521_ch_G0000249;Parent=HG03521_ch_T0000678;transcript_name=hg002_chrY_paternal_626.1;gene_name=LOC102724034;ID=exon:HG03521_ch_T0000678:2;Name=LOC102724034;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26147204	26152068	.	-	.	source_gene_common_name=GOLGA2P3Y;source_gene=hg002_chrY_paternal_624;alternative_source_transcripts=hg002_chrY_paternal_550.1;gene_id=HG03521_ch_G0000250;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P3Y;gene_sources=liftoff;ID=HG03521_ch_G0000250;Name=GOLGA2P3Y
HG03521_chrY	CAT	transcript	26147204	26152068	1000	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_G0000250;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=HG03521_ch_T0000679;Name=GOLGA2P3Y
HG03521_chrY	CAT	exon	26147204	26147287	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03521_ch_T0000679:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26147288	26147369	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03521_ch_T0000679:0;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26147370	26147462	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03521_ch_T0000679:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26147463	26147551	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03521_ch_T0000679:1;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26147552	26147740	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03521_ch_T0000679:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26147741	26147995	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03521_ch_T0000679:2;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26147996	26148084	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03521_ch_T0000679:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26148085	26148504	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03521_ch_T0000679:3;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26148505	26148579	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03521_ch_T0000679:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26148580	26149935	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03521_ch_T0000679:4;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26149936	26149993	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03521_ch_T0000679:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26149994	26150289	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03521_ch_T0000679:5;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26150290	26150641	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03521_ch_T0000679:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26150642	26151760	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03521_ch_T0000679:6;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26151761	26151839	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03521_ch_T0000679:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26151840	26152025	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=intron:HG03521_ch_T0000679:7;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26152026	26152068	.	-	.	source_transcript=hg002_chrY_paternal_624.1;source_transcript_name=hg002_chrY_paternal_624.1;source_gene=hg002_chrY_paternal_624;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_624;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_624.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_624.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P3Y;alternative_source_transcripts=hg002_chrY_paternal_550.1;transcript_id=HG03521_ch_T0000679;gene_id=HG03521_ch_G0000250;Parent=HG03521_ch_T0000679;transcript_name=hg002_chrY_paternal_624.1;gene_name=GOLGA2P3Y;ID=exon:HG03521_ch_T0000679:8;Name=GOLGA2P3Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26247936	26258922	.	-	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_542;alternative_source_transcripts=hg002_chrY_paternal_542.1;gene_id=HG03521_ch_G0000251;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG03521_ch_G0000251;Name=LOC107987240
HG03521_chrY	CAT	transcript	26247936	26258922	1000	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03521_ch_T0000680;gene_id=HG03521_ch_G0000251;Parent=HG03521_ch_G0000251;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=HG03521_ch_T0000680;Name=LOC107987240
HG03521_chrY	CAT	exon	26247936	26248593	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03521_ch_T0000680;gene_id=HG03521_ch_G0000251;Parent=HG03521_ch_T0000680;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG03521_ch_T0000680:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26248594	26248802	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03521_ch_T0000680;gene_id=HG03521_ch_G0000251;Parent=HG03521_ch_T0000680;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG03521_ch_T0000680:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26248803	26248909	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03521_ch_T0000680;gene_id=HG03521_ch_G0000251;Parent=HG03521_ch_T0000680;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG03521_ch_T0000680:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26248910	26258690	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03521_ch_T0000680;gene_id=HG03521_ch_G0000251;Parent=HG03521_ch_T0000680;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=intron:HG03521_ch_T0000680:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26258691	26258922	.	-	.	source_transcript=hg002_chrY_paternal_542.1;source_transcript_name=hg002_chrY_paternal_542.1;source_gene=hg002_chrY_paternal_542;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_542;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_542.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_542.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_542.1;transcript_id=HG03521_ch_T0000680;gene_id=HG03521_ch_G0000251;Parent=HG03521_ch_T0000680;transcript_name=hg002_chrY_paternal_542.1;gene_name=LOC107987240;ID=exon:HG03521_ch_T0000680:2;Name=LOC107987240;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26266803	26268436	.	+	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_541;alternative_source_transcripts=hg002_chrY_paternal_541.1;gene_id=HG03521_ch_G0000252;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG03521_ch_G0000252;Name=LOC101928626
HG03521_chrY	CAT	transcript	26266803	26268436	1000	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03521_ch_T0000681;gene_id=HG03521_ch_G0000252;Parent=HG03521_ch_G0000252;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=HG03521_ch_T0000681;Name=LOC101928626
HG03521_chrY	CAT	exon	26266803	26266893	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03521_ch_T0000681;gene_id=HG03521_ch_G0000252;Parent=HG03521_ch_T0000681;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG03521_ch_T0000681:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26266894	26267588	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03521_ch_T0000681;gene_id=HG03521_ch_G0000252;Parent=HG03521_ch_T0000681;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG03521_ch_T0000681:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26267589	26267855	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03521_ch_T0000681;gene_id=HG03521_ch_G0000252;Parent=HG03521_ch_T0000681;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG03521_ch_T0000681:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26267856	26267992	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03521_ch_T0000681;gene_id=HG03521_ch_G0000252;Parent=HG03521_ch_T0000681;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=intron:HG03521_ch_T0000681:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26267993	26268436	.	+	.	source_transcript=hg002_chrY_paternal_541.1;source_transcript_name=hg002_chrY_paternal_541.1;source_gene=hg002_chrY_paternal_541;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_541;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_541.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_541.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_541.1;transcript_id=HG03521_ch_T0000681;gene_id=HG03521_ch_G0000252;Parent=HG03521_ch_T0000681;transcript_name=hg002_chrY_paternal_541.1;gene_name=LOC101928626;ID=exon:HG03521_ch_T0000681:2;Name=LOC101928626;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26357189	26370294	.	+	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_612;alternative_source_transcripts=hg002_chrY_paternal_538.1;gene_id=HG03521_ch_G0000253;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG03521_ch_G0000253;Name=LOC107987350
HG03521_chrY	CAT	transcript	26357189	26370294	1000	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03521_ch_T0000682;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_G0000253;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG03521_ch_T0000682;Name=LOC107987350
HG03521_chrY	CAT	exon	26357189	26357644	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03521_ch_T0000682;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_T0000682;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000682:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26357645	26363614	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03521_ch_T0000682;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_T0000682;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03521_ch_T0000682:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26363615	26365779	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03521_ch_T0000682;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_T0000682;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000682:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26365780	26366420	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03521_ch_T0000682;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_T0000682;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03521_ch_T0000682:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26366421	26370294	.	+	.	source_transcript=hg002_chrY_paternal_612.1;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.1;transcript_id=HG03521_ch_T0000682;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_T0000682;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000682:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	26357189	26370294	1000	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03521_ch_T0000683;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_G0000253;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=HG03521_ch_T0000683;Name=LOC107987350
HG03521_chrY	CAT	exon	26357189	26357644	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03521_ch_T0000683;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_T0000683;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000683:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26357645	26363146	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03521_ch_T0000683;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_T0000683;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03521_ch_T0000683:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26363147	26365779	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03521_ch_T0000683;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_T0000683;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000683:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26365780	26366420	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03521_ch_T0000683;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_T0000683;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=intron:HG03521_ch_T0000683:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26366421	26370294	.	+	.	source_transcript=hg002_chrY_paternal_612.2;source_transcript_name=hg002_chrY_paternal_612.1;source_gene=hg002_chrY_paternal_612;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_612;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_612.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_612.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_538.2;transcript_id=HG03521_ch_T0000683;gene_id=HG03521_ch_G0000253;Parent=HG03521_ch_T0000683;transcript_name=hg002_chrY_paternal_612.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000683:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26422563	26423693	.	+	.	source_gene_common_name=TTTY17A;source_gene=hg002_chrY_paternal_516;alternative_source_transcripts=hg002_chrY_paternal_537.1;gene_id=HG03521_ch_G0000254;gene_biotype=lncRNA;gene_name=TTTY17A;gene_sources=liftoff;ID=HG03521_ch_G0000254;Name=TTTY17A
HG03521_chrY	CAT	transcript	26422563	26423693	1000	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03521_ch_T0000684;gene_id=HG03521_ch_G0000254;Parent=HG03521_ch_G0000254;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=HG03521_ch_T0000684;Name=TTTY17A
HG03521_chrY	CAT	exon	26422563	26422622	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03521_ch_T0000684;gene_id=HG03521_ch_G0000254;Parent=HG03521_ch_T0000684;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG03521_ch_T0000684:0;Name=TTTY17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26422623	26423587	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03521_ch_T0000684;gene_id=HG03521_ch_G0000254;Parent=HG03521_ch_T0000684;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=intron:HG03521_ch_T0000684:0;Name=TTTY17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26423588	26423693	.	+	.	source_transcript=hg002_chrY_paternal_516.1;source_transcript_name=hg002_chrY_paternal_516.1;source_gene=hg002_chrY_paternal_516;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_516;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_516.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_516.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17A;alternative_source_transcripts=hg002_chrY_paternal_537.1;transcript_id=HG03521_ch_T0000684;gene_id=HG03521_ch_G0000254;Parent=HG03521_ch_T0000684;transcript_name=hg002_chrY_paternal_516.1;gene_name=TTTY17A;ID=exon:HG03521_ch_T0000684:1;Name=TTTY17A;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26507446	26544261	.	+	.	source_gene_common_name=TTTY4B;source_gene=hg002_chrY_paternal_608;alternative_source_transcripts=hg002_chrY_paternal_534.1;gene_id=HG03521_ch_G0000255;gene_biotype=lncRNA;gene_name=TTTY4B;gene_sources=liftoff;ID=HG03521_ch_G0000255;Name=TTTY4B
HG03521_chrY	CAT	transcript	26507446	26544261	1000	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03521_ch_T0000685;gene_id=HG03521_ch_G0000255;Parent=HG03521_ch_G0000255;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=HG03521_ch_T0000685;Name=TTTY4B
HG03521_chrY	CAT	exon	26507446	26507606	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03521_ch_T0000685;gene_id=HG03521_ch_G0000255;Parent=HG03521_ch_T0000685;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03521_ch_T0000685:0;Name=TTTY4B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26507607	26534622	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03521_ch_T0000685;gene_id=HG03521_ch_G0000255;Parent=HG03521_ch_T0000685;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG03521_ch_T0000685:0;Name=TTTY4B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26534623	26534698	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03521_ch_T0000685;gene_id=HG03521_ch_G0000255;Parent=HG03521_ch_T0000685;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03521_ch_T0000685:1;Name=TTTY4B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26534699	26536502	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03521_ch_T0000685;gene_id=HG03521_ch_G0000255;Parent=HG03521_ch_T0000685;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG03521_ch_T0000685:1;Name=TTTY4B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26536503	26536610	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03521_ch_T0000685;gene_id=HG03521_ch_G0000255;Parent=HG03521_ch_T0000685;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03521_ch_T0000685:2;Name=TTTY4B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26536611	26543260	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03521_ch_T0000685;gene_id=HG03521_ch_G0000255;Parent=HG03521_ch_T0000685;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=intron:HG03521_ch_T0000685:2;Name=TTTY4B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26543261	26544261	.	+	.	source_transcript=hg002_chrY_paternal_608.1;source_transcript_name=hg002_chrY_paternal_608.1;source_gene=hg002_chrY_paternal_608;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_608;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_608.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_608.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4B;alternative_source_transcripts=hg002_chrY_paternal_534.1;transcript_id=HG03521_ch_T0000685;gene_id=HG03521_ch_G0000255;Parent=HG03521_ch_T0000685;transcript_name=hg002_chrY_paternal_608.1;gene_name=TTTY4B;ID=exon:HG03521_ch_T0000685:3;Name=TTTY4B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26555240	26576442	.	+	.	source_gene_common_name=BPY2;source_gene=hg002_chrY_paternal_607;alternative_source_transcripts=hg002_chrY_paternal_533.1;gene_id=HG03521_ch_G0000256;gene_biotype=protein_coding;gene_name=BPY2;gene_sources=liftoff;ID=HG03521_ch_G0000256;Name=BPY2
HG03521_chrY	CAT	transcript	26555240	26576442	10000	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_G0000256;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=HG03521_ch_T0000686;Name=BPY2
HG03521_chrY	CAT	exon	26555240	26555270	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03521_ch_T0000686:0;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26555271	26555545	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03521_ch_T0000686:0;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26555546	26555668	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03521_ch_T0000686:1;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26555669	26558733	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03521_ch_T0000686:1;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26558734	26558870	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03521_ch_T0000686:2;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26558871	26563279	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03521_ch_T0000686:2;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26563280	26563398	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03521_ch_T0000686:3;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26563321	26563398	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03521_ch_T0000686:0;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	26563321	26563323	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=start_codon:HG03521_ch_T0000686;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26563399	26565457	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03521_ch_T0000686:3;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26565458	26565575	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03521_ch_T0000686:4;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26565458	26565575	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03521_ch_T0000686:1;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26565576	26568428	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03521_ch_T0000686:4;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26568429	26568534	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03521_ch_T0000686:5;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26568429	26568534	.	+	2	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03521_ch_T0000686:2;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26568535	26569226	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03521_ch_T0000686:5;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26569227	26569351	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03521_ch_T0000686:6;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26569227	26569245	.	+	1	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=CDS:HG03521_ch_T0000686:3;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	26569243	26569245	.	+	0	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=stop_codon:HG03521_ch_T0000686;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26569352	26575901	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03521_ch_T0000686:6;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26575902	26576026	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03521_ch_T0000686:7;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26576027	26576120	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=intron:HG03521_ch_T0000686:7;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26576121	26576442	.	+	.	source_transcript=hg002_chrY_paternal_607.1;source_transcript_name=hg002_chrY_paternal_607.1;source_gene=hg002_chrY_paternal_607;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_607;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_607.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_607.1;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2;alternative_source_transcripts=hg002_chrY_paternal_533.1;transcript_id=HG03521_ch_T0000686;gene_id=HG03521_ch_G0000256;Parent=HG03521_ch_T0000686;transcript_name=hg002_chrY_paternal_607.1;gene_name=BPY2;ID=exon:HG03521_ch_T0000686:8;Name=BPY2;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26677246	26680587	.	-	.	source_gene_common_name=LOC105377241;source_gene=hg002_chrY_paternal_525;gene_id=HG03521_ch_G0000257;gene_biotype=lncRNA;gene_name=LOC105377241;gene_sources=liftoff;ID=HG03521_ch_G0000257;Name=LOC105377241
HG03521_chrY	CAT	transcript	26677246	26680587	1000	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000687;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_G0000257;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG03521_ch_T0000687;Name=LOC105377241
HG03521_chrY	CAT	exon	26677246	26677346	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000687;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_T0000687;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03521_ch_T0000687:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26677347	26679677	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000687;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_T0000687;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03521_ch_T0000687:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26679678	26679742	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000687;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_T0000687;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03521_ch_T0000687:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26679743	26680404	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000687;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_T0000687;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03521_ch_T0000687:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26680405	26680587	.	-	.	source_transcript=hg002_chrY_paternal_525.1;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000687;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_T0000687;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03521_ch_T0000687:2;Name=LOC105377241;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	26677246	26680587	1000	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000688;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_G0000257;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=HG03521_ch_T0000688;Name=LOC105377241
HG03521_chrY	CAT	exon	26677246	26677346	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000688;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_T0000688;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03521_ch_T0000688:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26677347	26679704	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000688;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_T0000688;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03521_ch_T0000688:0;Name=LOC105377241;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26679705	26679742	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000688;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_T0000688;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03521_ch_T0000688:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26679743	26680404	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000688;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_T0000688;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=intron:HG03521_ch_T0000688:1;Name=LOC105377241;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26680405	26680587	.	-	.	source_transcript=hg002_chrY_paternal_525.2;source_transcript_name=hg002_chrY_paternal_525.1;source_gene=hg002_chrY_paternal_525;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_525;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_525.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_525.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377241;transcript_id=HG03521_ch_T0000688;gene_id=HG03521_ch_G0000257;Parent=HG03521_ch_T0000688;transcript_name=hg002_chrY_paternal_525.1;gene_name=LOC105377241;ID=exon:HG03521_ch_T0000688:2;Name=LOC105377241;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26700201	26763882	.	-	.	source_gene_common_name=DAZ4;source_gene=hg002_chrY_paternal_527;gene_id=HG03521_ch_G0000258;gene_biotype=protein_coding;gene_name=DAZ4;gene_sources=liftoff;ID=HG03521_ch_G0000258;Name=DAZ4
HG03521_chrY	CAT	transcript	26700201	26763882	100	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_G0000258;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03521_ch_T0000689;Name=DAZ4
HG03521_chrY	CAT	exon	26700201	26702057	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000689:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26702058	26706030	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000689:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26706031	26706129	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000689:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26706066	26706129	.	-	1	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000689:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	26706066	26706068	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03521_ch_T0000689;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26706130	26710701	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000689:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26710702	26710736	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000689:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26710702	26710736	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000689:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26710737	26711481	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000689:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26711482	26711553	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000689:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26711482	26711553	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000689:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26711554	26735569	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000689:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26735570	26735641	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000689:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26735570	26735641	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000689:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26735642	26737965	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000689:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26737966	26738037	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000689:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26737966	26738037	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000689:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26738038	26740354	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000689:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26740355	26740426	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000689:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26740355	26740426	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000689:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26740427	26742797	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000689:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26742798	26742869	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000689:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26742798	26742869	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000689:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26742870	26763572	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000689:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26763573	26763882	.	-	.	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000689:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26763573	26763575	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000689:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	26763573	26763575	.	-	0	source_transcript=hg002_chrY_paternal_527.2;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000689;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000689;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03521_ch_T0000689;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	26700201	26763783	100	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_G0000258;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03521_ch_T0000690;Name=DAZ4
HG03521_chrY	CAT	exon	26700201	26702057	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26702058	26706030	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26706031	26706129	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26706066	26706129	.	-	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	26706066	26706068	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03521_ch_T0000690;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26706130	26710701	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26710702	26710736	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26710702	26710736	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26710737	26711481	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26711482	26711553	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26711482	26711553	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26711554	26713865	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26713866	26713937	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26713866	26713937	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26713938	26716249	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26716250	26716321	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26716250	26716321	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26716322	26718633	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26718634	26718705	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26718634	26718705	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26718706	26721018	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26721019	26721090	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26721019	26721090	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26721091	26735569	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26735570	26735641	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26735570	26735641	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26735642	26737965	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26737966	26738037	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26737966	26738037	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26738038	26740354	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26740355	26740426	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26740355	26740426	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26740427	26742797	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26742798	26742869	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26742798	26742869	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26742870	26744269	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26744270	26744409	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26744270	26744409	.	-	2	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26744410	26744498	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26744499	26744562	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:13;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26744499	26744562	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26744563	26744998	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:13;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26744999	26745050	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:14;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26744999	26745050	.	-	1	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:13;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26745051	26745610	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:14;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26745611	26745702	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:15;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26745611	26745702	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:14;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26745703	26745976	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:15;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26745977	26746123	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:16;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26745977	26746123	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:15;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26746124	26763572	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000690:16;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26763573	26763783	.	-	.	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000690:17;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26763573	26763575	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000690:16;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	26763573	26763575	.	-	0	source_transcript=hg002_chrY_paternal_527.3;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000690;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000690;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03521_ch_T0000690;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	26700201	26763882	100	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_G0000258;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=HG03521_ch_T0000691;Name=DAZ4
HG03521_chrY	CAT	exon	26700201	26702057	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26702058	26706030	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26706031	26706129	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26706066	26706129	.	-	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:0;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	26706066	26706068	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=stop_codon:HG03521_ch_T0000691;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26706130	26710701	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26710702	26710736	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26710702	26710736	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:1;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26710737	26711481	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26711482	26711553	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26711482	26711553	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:2;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26711554	26721018	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26721019	26721090	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26721019	26721090	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:3;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26721091	26735569	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26735570	26735641	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26735570	26735641	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:4;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26735642	26737965	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26737966	26738037	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26737966	26738037	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:5;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26738038	26740354	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26740355	26740426	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26740355	26740426	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:6;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26740427	26742797	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26742798	26742869	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26742798	26742869	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:7;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26742870	26744269	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26744270	26744409	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26744270	26744409	.	-	2	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:8;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26744410	26744498	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26744499	26744562	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26744499	26744562	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:9;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26744563	26744998	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26744999	26745050	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26744999	26745050	.	-	1	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:10;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26745051	26745610	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26745611	26745702	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26745611	26745702	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:11;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26745703	26745976	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26745977	26746123	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:13;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26745977	26746123	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:12;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26746124	26763572	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=intron:HG03521_ch_T0000691:13;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26763573	26763882	.	-	.	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=exon:HG03521_ch_T0000691:14;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26763573	26763575	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=CDS:HG03521_ch_T0000691:13;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	26763573	26763575	.	-	0	source_transcript=hg002_chrY_paternal_527.1;source_transcript_name=hg002_chrY_paternal_527.3;source_gene=hg002_chrY_paternal_527;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_527;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_527.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_527.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ4;transcript_id=HG03521_ch_T0000691;gene_id=HG03521_ch_G0000258;Parent=HG03521_ch_T0000691;transcript_name=hg002_chrY_paternal_527.3;gene_name=DAZ4;ID=start_codon:HG03521_ch_T0000691;Name=DAZ4;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26784309	26827497	.	+	.	source_gene_common_name=DAZ3;source_gene=hg002_chrY_paternal_526;gene_id=HG03521_ch_G0000259;gene_biotype=protein_coding;gene_name=DAZ3;gene_sources=liftoff;ID=HG03521_ch_G0000259;Name=DAZ3
HG03521_chrY	CAT	transcript	26784309	26827497	100	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_G0000259;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=HG03521_ch_T0000692;Name=DAZ3
HG03521_chrY	CAT	exon	26784309	26784519	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:0;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26784517	26784519	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000692:0;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	26784517	26784519	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=start_codon:HG03521_ch_T0000692;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26784520	26794373	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000692:0;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26794374	26794445	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:1;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26794374	26794445	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000692:1;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26794446	26796816	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000692:1;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26796817	26796888	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:2;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26796817	26796888	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000692:2;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26796889	26799206	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000692:2;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26799207	26799278	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:3;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26799207	26799278	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000692:3;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26799279	26801602	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000692:3;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26801603	26801674	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:4;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26801603	26801674	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000692:4;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26801675	26803979	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000692:4;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26803980	26804051	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:5;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26803980	26804051	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000692:5;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26804052	26806356	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000692:5;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26806357	26806428	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:6;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26806357	26806428	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000692:6;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26806429	26816144	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000692:6;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26816145	26816216	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:7;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26816145	26816216	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000692:7;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26816217	26816961	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000692:7;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26816962	26816996	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:8;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26816962	26816996	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000692:8;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26816997	26821568	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000692:8;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26821569	26821667	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:9;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26821569	26821632	.	+	1	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=CDS:HG03521_ch_T0000692:9;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	26821630	26821632	.	+	0	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=stop_codon:HG03521_ch_T0000692;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26821668	26825640	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=intron:HG03521_ch_T0000692:9;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26825641	26827497	.	+	.	source_transcript=hg002_chrY_paternal_526.1;source_transcript_name=hg002_chrY_paternal_526.1;source_gene=hg002_chrY_paternal_526;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_526;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_526.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_526.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=DAZ3;transcript_id=HG03521_ch_T0000692;gene_id=HG03521_ch_G0000259;Parent=HG03521_ch_T0000692;transcript_name=hg002_chrY_paternal_526.1;gene_name=DAZ3;ID=exon:HG03521_ch_T0000692:10;Name=DAZ3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26847108	26850449	.	+	.	source_gene_common_name=LOC105377238;source_gene=hg002_chrY_paternal_599;gene_id=HG03521_ch_G0000260;gene_biotype=lncRNA;gene_name=LOC105377238;gene_sources=liftoff;ID=HG03521_ch_G0000260;Name=LOC105377238
HG03521_chrY	CAT	transcript	26847108	26850449	1000	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000693;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_G0000260;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG03521_ch_T0000693;Name=LOC105377238
HG03521_chrY	CAT	exon	26847108	26847290	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000693;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_T0000693;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03521_ch_T0000693:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26847291	26847952	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000693;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_T0000693;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03521_ch_T0000693:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26847953	26848017	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000693;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_T0000693;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03521_ch_T0000693:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26848018	26850348	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000693;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_T0000693;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03521_ch_T0000693:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26850349	26850449	.	+	.	source_transcript=hg002_chrY_paternal_599.1;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000693;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_T0000693;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03521_ch_T0000693:2;Name=LOC105377238;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	26847108	26850449	1000	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000694;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_G0000260;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=HG03521_ch_T0000694;Name=LOC105377238
HG03521_chrY	CAT	exon	26847108	26847290	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000694;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_T0000694;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03521_ch_T0000694:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26847291	26847952	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000694;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_T0000694;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03521_ch_T0000694:0;Name=LOC105377238;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26847953	26847990	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000694;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_T0000694;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03521_ch_T0000694:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26847991	26850348	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000694;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_T0000694;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=intron:HG03521_ch_T0000694:1;Name=LOC105377238;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26850349	26850449	.	+	.	source_transcript=hg002_chrY_paternal_599.2;source_transcript_name=hg002_chrY_paternal_599.1;source_gene=hg002_chrY_paternal_599;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_599;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_599.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_599.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377238;transcript_id=HG03521_ch_T0000694;gene_id=HG03521_ch_G0000260;Parent=HG03521_ch_T0000694;transcript_name=hg002_chrY_paternal_599.1;gene_name=LOC105377238;ID=exon:HG03521_ch_T0000694:2;Name=LOC105377238;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26951313	26972515	.	-	.	source_gene_common_name=BPY2C;source_gene=hg002_chrY_paternal_520;gene_id=HG03521_ch_G0000261;gene_biotype=protein_coding;gene_name=BPY2C;gene_sources=liftoff;ID=HG03521_ch_G0000261;Name=BPY2C
HG03521_chrY	CAT	transcript	26951313	26972515	100	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_G0000261;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=HG03521_ch_T0000695;Name=BPY2C
HG03521_chrY	CAT	exon	26951313	26951634	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03521_ch_T0000695:0;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26951635	26951728	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03521_ch_T0000695:0;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26951729	26951853	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03521_ch_T0000695:1;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26951854	26958403	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03521_ch_T0000695:1;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26958404	26958528	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03521_ch_T0000695:2;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26958510	26958528	.	-	1	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03521_ch_T0000695:0;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	26958510	26958512	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=stop_codon:HG03521_ch_T0000695;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26958529	26959220	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03521_ch_T0000695:2;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26959221	26959326	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03521_ch_T0000695:3;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26959221	26959326	.	-	2	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03521_ch_T0000695:1;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26959327	26962179	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03521_ch_T0000695:3;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26962180	26962297	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03521_ch_T0000695:4;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26962180	26962297	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03521_ch_T0000695:2;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26962298	26964356	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03521_ch_T0000695:4;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26964357	26964475	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03521_ch_T0000695:5;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	26964357	26964434	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=CDS:HG03521_ch_T0000695:3;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	26964432	26964434	.	-	0	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=start_codon:HG03521_ch_T0000695;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26964476	26968884	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03521_ch_T0000695:5;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26968885	26969021	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03521_ch_T0000695:6;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26969022	26972086	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03521_ch_T0000695:6;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26972087	26972209	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03521_ch_T0000695:7;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26972210	26972484	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=intron:HG03521_ch_T0000695:7;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26972485	26972515	.	-	.	source_transcript=hg002_chrY_paternal_520.1;source_transcript_name=hg002_chrY_paternal_520.1;source_gene=hg002_chrY_paternal_520;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_520;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_520.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_520.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=BPY2C;transcript_id=HG03521_ch_T0000695;gene_id=HG03521_ch_G0000261;Parent=HG03521_ch_T0000695;transcript_name=hg002_chrY_paternal_520.1;gene_name=BPY2C;ID=exon:HG03521_ch_T0000695:8;Name=BPY2C;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	26983494	27020312	.	-	.	source_gene_common_name=TTTY4;source_gene=hg002_chrY_paternal_534;gene_id=HG03521_ch_G0000262;gene_biotype=lncRNA;gene_name=TTTY4;gene_sources=liftoff;ID=HG03521_ch_G0000262;Name=TTTY4
HG03521_chrY	CAT	transcript	26983494	27020312	1000	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03521_ch_T0000696;gene_id=HG03521_ch_G0000262;Parent=HG03521_ch_G0000262;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=HG03521_ch_T0000696;Name=TTTY4
HG03521_chrY	CAT	exon	26983494	26984494	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03521_ch_T0000696;gene_id=HG03521_ch_G0000262;Parent=HG03521_ch_T0000696;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03521_ch_T0000696:0;Name=TTTY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26984495	26991162	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03521_ch_T0000696;gene_id=HG03521_ch_G0000262;Parent=HG03521_ch_T0000696;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG03521_ch_T0000696:0;Name=TTTY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26991163	26991270	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03521_ch_T0000696;gene_id=HG03521_ch_G0000262;Parent=HG03521_ch_T0000696;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03521_ch_T0000696:1;Name=TTTY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26991271	26993074	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03521_ch_T0000696;gene_id=HG03521_ch_G0000262;Parent=HG03521_ch_T0000696;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG03521_ch_T0000696:1;Name=TTTY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	26993075	26993150	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03521_ch_T0000696;gene_id=HG03521_ch_G0000262;Parent=HG03521_ch_T0000696;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03521_ch_T0000696:2;Name=TTTY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	26993151	27020151	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03521_ch_T0000696;gene_id=HG03521_ch_G0000262;Parent=HG03521_ch_T0000696;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=intron:HG03521_ch_T0000696:2;Name=TTTY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27020152	27020312	.	-	.	source_transcript=hg002_chrY_paternal_534.1;source_transcript_name=hg002_chrY_paternal_534.1;source_gene=hg002_chrY_paternal_534;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_534;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_534.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_534.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY4;transcript_id=HG03521_ch_T0000696;gene_id=HG03521_ch_G0000262;Parent=HG03521_ch_T0000696;transcript_name=hg002_chrY_paternal_534.1;gene_name=TTTY4;ID=exon:HG03521_ch_T0000696:3;Name=TTTY4;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27104051	27105182	.	-	.	source_gene_common_name=TTTY17B;source_gene=hg002_chrY_paternal_611;gene_id=HG03521_ch_G0000263;gene_biotype=lncRNA;gene_name=TTTY17B;gene_sources=liftoff;ID=HG03521_ch_G0000263;Name=TTTY17B
HG03521_chrY	CAT	transcript	27104051	27105182	1000	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;transcript_id=HG03521_ch_T0000697;gene_id=HG03521_ch_G0000263;Parent=HG03521_ch_G0000263;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=HG03521_ch_T0000697;Name=TTTY17B
HG03521_chrY	CAT	exon	27104051	27104156	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;transcript_id=HG03521_ch_T0000697;gene_id=HG03521_ch_G0000263;Parent=HG03521_ch_T0000697;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG03521_ch_T0000697:0;Name=TTTY17B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27104157	27105122	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;transcript_id=HG03521_ch_T0000697;gene_id=HG03521_ch_G0000263;Parent=HG03521_ch_T0000697;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=intron:HG03521_ch_T0000697:0;Name=TTTY17B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27105123	27105182	.	-	.	source_transcript=hg002_chrY_paternal_611.1;source_transcript_name=hg002_chrY_paternal_611.1;source_gene=hg002_chrY_paternal_611;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_611;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_611.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_611.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY17B;transcript_id=HG03521_ch_T0000697;gene_id=HG03521_ch_G0000263;Parent=HG03521_ch_T0000697;transcript_name=hg002_chrY_paternal_611.1;gene_name=TTTY17B;ID=exon:HG03521_ch_T0000697:1;Name=TTTY17B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27157450	27170555	.	-	.	source_gene_common_name=LOC107987350;source_gene=hg002_chrY_paternal_538;alternative_source_transcripts=hg002_chrY_paternal_612.2;gene_id=HG03521_ch_G0000264;gene_biotype=lncRNA;gene_name=LOC107987350;gene_sources=liftoff;ID=HG03521_ch_G0000264;Name=LOC107987350
HG03521_chrY	CAT	transcript	27157450	27170555	1000	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03521_ch_T0000698;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_G0000264;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG03521_ch_T0000698;Name=LOC107987350
HG03521_chrY	CAT	exon	27157450	27161323	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03521_ch_T0000698;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_T0000698;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000698:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27161324	27161964	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03521_ch_T0000698;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_T0000698;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03521_ch_T0000698:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27161965	27164597	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03521_ch_T0000698;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_T0000698;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000698:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27164598	27170099	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03521_ch_T0000698;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_T0000698;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03521_ch_T0000698:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27170100	27170555	.	-	.	source_transcript=hg002_chrY_paternal_538.2;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.2;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.2;transcript_id=HG03521_ch_T0000698;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_T0000698;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000698:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	27157450	27170555	1000	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03521_ch_T0000699;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_G0000264;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=HG03521_ch_T0000699;Name=LOC107987350
HG03521_chrY	CAT	exon	27157450	27161323	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03521_ch_T0000699;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_T0000699;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000699:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27161324	27161964	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03521_ch_T0000699;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_T0000699;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03521_ch_T0000699:0;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27161965	27164129	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03521_ch_T0000699;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_T0000699;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000699:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27164130	27170099	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03521_ch_T0000699;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_T0000699;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=intron:HG03521_ch_T0000699:1;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27170100	27170555	.	-	.	source_transcript=hg002_chrY_paternal_538.1;source_transcript_name=hg002_chrY_paternal_538.1;source_gene=hg002_chrY_paternal_538;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_538;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_538.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_538.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987350;alternative_source_transcripts=hg002_chrY_paternal_612.1;transcript_id=HG03521_ch_T0000699;gene_id=HG03521_ch_G0000264;Parent=HG03521_ch_T0000699;transcript_name=hg002_chrY_paternal_538.1;gene_name=LOC107987350;ID=exon:HG03521_ch_T0000699:2;Name=LOC107987350;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27259341	27260974	.	-	.	source_gene_common_name=LOC101928626;source_gene=hg002_chrY_paternal_615;alternative_source_transcripts=hg002_chrY_paternal_615.1;gene_id=HG03521_ch_G0000265;gene_biotype=lncRNA;gene_name=LOC101928626;gene_sources=liftoff;ID=HG03521_ch_G0000265;Name=LOC101928626
HG03521_chrY	CAT	transcript	27259341	27260974	1000	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03521_ch_T0000700;gene_id=HG03521_ch_G0000265;Parent=HG03521_ch_G0000265;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=HG03521_ch_T0000700;Name=LOC101928626
HG03521_chrY	CAT	exon	27259341	27259784	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03521_ch_T0000700;gene_id=HG03521_ch_G0000265;Parent=HG03521_ch_T0000700;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG03521_ch_T0000700:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27259785	27259921	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03521_ch_T0000700;gene_id=HG03521_ch_G0000265;Parent=HG03521_ch_T0000700;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG03521_ch_T0000700:0;Name=LOC101928626;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27259922	27260188	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03521_ch_T0000700;gene_id=HG03521_ch_G0000265;Parent=HG03521_ch_T0000700;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG03521_ch_T0000700:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27260189	27260883	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03521_ch_T0000700;gene_id=HG03521_ch_G0000265;Parent=HG03521_ch_T0000700;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=intron:HG03521_ch_T0000700:1;Name=LOC101928626;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27260884	27260974	.	-	.	source_transcript=hg002_chrY_paternal_615.1;source_transcript_name=hg002_chrY_paternal_615.1;source_gene=hg002_chrY_paternal_615;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_615;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_615.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_615.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC101928626;alternative_source_transcripts=hg002_chrY_paternal_615.1;transcript_id=HG03521_ch_T0000700;gene_id=HG03521_ch_G0000265;Parent=HG03521_ch_T0000700;transcript_name=hg002_chrY_paternal_615.1;gene_name=LOC101928626;ID=exon:HG03521_ch_T0000700:2;Name=LOC101928626;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27268855	27279858	.	+	.	source_gene_common_name=LOC107987240;source_gene=hg002_chrY_paternal_616;alternative_source_transcripts=hg002_chrY_paternal_616.1;gene_id=HG03521_ch_G0000266;gene_biotype=lncRNA;gene_name=LOC107987240;gene_sources=liftoff;ID=HG03521_ch_G0000266;Name=LOC107987240
HG03521_chrY	CAT	transcript	27268855	27279858	1000	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03521_ch_T0000701;gene_id=HG03521_ch_G0000266;Parent=HG03521_ch_G0000266;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=HG03521_ch_T0000701;Name=LOC107987240
HG03521_chrY	CAT	exon	27268855	27269086	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03521_ch_T0000701;gene_id=HG03521_ch_G0000266;Parent=HG03521_ch_T0000701;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG03521_ch_T0000701:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27269087	27278884	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03521_ch_T0000701;gene_id=HG03521_ch_G0000266;Parent=HG03521_ch_T0000701;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG03521_ch_T0000701:0;Name=LOC107987240;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27278885	27278991	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03521_ch_T0000701;gene_id=HG03521_ch_G0000266;Parent=HG03521_ch_T0000701;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG03521_ch_T0000701:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27278992	27279200	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03521_ch_T0000701;gene_id=HG03521_ch_G0000266;Parent=HG03521_ch_T0000701;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=intron:HG03521_ch_T0000701:1;Name=LOC107987240;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27279201	27279858	.	+	.	source_transcript=hg002_chrY_paternal_616.1;source_transcript_name=hg002_chrY_paternal_616.1;source_gene=hg002_chrY_paternal_616;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_616;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_616.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_616.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987240;alternative_source_transcripts=hg002_chrY_paternal_616.1;transcript_id=HG03521_ch_T0000701;gene_id=HG03521_ch_G0000266;Parent=HG03521_ch_T0000701;transcript_name=hg002_chrY_paternal_616.1;gene_name=LOC107987240;ID=exon:HG03521_ch_T0000701:2;Name=LOC107987240;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27298719	27315137	.	-	.	source_gene_common_name=SEPTIN14P23;source_gene=hg002_chrY_paternal_617;alternative_source_transcripts=hg002_chrY_paternal_617.1;gene_id=HG03521_ch_G0000267;gene_biotype=transcribed_pseudogene;gene_name=SEPTIN14P23;gene_sources=liftoff;ID=HG03521_ch_G0000267;Name=SEPTIN14P23
HG03521_chrY	CAT	transcript	27298719	27315137	1000	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03521_ch_T0000702;gene_id=HG03521_ch_G0000267;Parent=HG03521_ch_G0000267;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=HG03521_ch_T0000702;Name=SEPTIN14P23
HG03521_chrY	CAT	exon	27298719	27299297	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03521_ch_T0000702;gene_id=HG03521_ch_G0000267;Parent=HG03521_ch_T0000702;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG03521_ch_T0000702:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27299298	27307333	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03521_ch_T0000702;gene_id=HG03521_ch_G0000267;Parent=HG03521_ch_T0000702;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG03521_ch_T0000702:0;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27307334	27307502	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03521_ch_T0000702;gene_id=HG03521_ch_G0000267;Parent=HG03521_ch_T0000702;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG03521_ch_T0000702:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27307503	27315043	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03521_ch_T0000702;gene_id=HG03521_ch_G0000267;Parent=HG03521_ch_T0000702;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=intron:HG03521_ch_T0000702:1;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27315044	27315137	.	-	.	source_transcript=hg002_chrY_paternal_617.1;source_transcript_name=hg002_chrY_paternal_617.1;source_gene=hg002_chrY_paternal_617;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_617;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_617.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_617.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SEPTIN14P23;alternative_source_transcripts=hg002_chrY_paternal_617.1;transcript_id=HG03521_ch_T0000702;gene_id=HG03521_ch_G0000267;Parent=HG03521_ch_T0000702;transcript_name=hg002_chrY_paternal_617.1;gene_name=SEPTIN14P23;ID=exon:HG03521_ch_T0000702:2;Name=SEPTIN14P23;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27375734	27380599	.	+	.	source_gene_common_name=GOLGA2P2Y;source_gene=hg002_chrY_paternal_550;alternative_source_transcripts=hg002_chrY_paternal_624.1;gene_id=HG03521_ch_G0000268;gene_biotype=transcribed_pseudogene;gene_name=GOLGA2P2Y;gene_sources=liftoff;ID=HG03521_ch_G0000268;Name=GOLGA2P2Y
HG03521_chrY	CAT	transcript	27375734	27380599	1000	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_G0000268;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=HG03521_ch_T0000703;Name=GOLGA2P2Y
HG03521_chrY	CAT	exon	27375734	27375776	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03521_ch_T0000703:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27375777	27375962	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03521_ch_T0000703:0;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27375963	27376041	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03521_ch_T0000703:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27376042	27377161	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03521_ch_T0000703:1;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27377162	27377513	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03521_ch_T0000703:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27377514	27377809	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03521_ch_T0000703:2;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27377810	27377867	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03521_ch_T0000703:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27377868	27379223	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03521_ch_T0000703:3;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27379224	27379298	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03521_ch_T0000703:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27379299	27379718	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03521_ch_T0000703:4;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27379719	27379807	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03521_ch_T0000703:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27379808	27380062	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03521_ch_T0000703:5;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27380063	27380251	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03521_ch_T0000703:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27380252	27380340	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03521_ch_T0000703:6;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27380341	27380433	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03521_ch_T0000703:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27380434	27380515	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=intron:HG03521_ch_T0000703:7;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27380516	27380599	.	+	.	source_transcript=hg002_chrY_paternal_550.1;source_transcript_name=hg002_chrY_paternal_550.1;source_gene=hg002_chrY_paternal_550;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_550;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_550.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_550.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=GOLGA2P2Y;alternative_source_transcripts=hg002_chrY_paternal_624.1;transcript_id=HG03521_ch_T0000703;gene_id=HG03521_ch_G0000268;Parent=HG03521_ch_T0000703;transcript_name=hg002_chrY_paternal_550.1;gene_name=GOLGA2P2Y;ID=exon:HG03521_ch_T0000703:8;Name=GOLGA2P2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27382598	27384128	.	-	.	source_gene_common_name=LOC102724034;source_gene=hg002_chrY_paternal_552;alternative_source_transcripts=hg002_chrY_paternal_626.1;gene_id=HG03521_ch_G0000269;gene_biotype=lncRNA;gene_name=LOC102724034;gene_sources=liftoff;ID=HG03521_ch_G0000269;Name=LOC102724034
HG03521_chrY	CAT	transcript	27382598	27384128	1000	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03521_ch_T0000704;gene_id=HG03521_ch_G0000269;Parent=HG03521_ch_G0000269;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=HG03521_ch_T0000704;Name=LOC102724034
HG03521_chrY	CAT	exon	27382598	27383021	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03521_ch_T0000704;gene_id=HG03521_ch_G0000269;Parent=HG03521_ch_T0000704;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG03521_ch_T0000704:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27383022	27383289	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03521_ch_T0000704;gene_id=HG03521_ch_G0000269;Parent=HG03521_ch_T0000704;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG03521_ch_T0000704:0;Name=LOC102724034;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27383290	27383414	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03521_ch_T0000704;gene_id=HG03521_ch_G0000269;Parent=HG03521_ch_T0000704;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG03521_ch_T0000704:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27383415	27384102	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03521_ch_T0000704;gene_id=HG03521_ch_G0000269;Parent=HG03521_ch_T0000704;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=intron:HG03521_ch_T0000704:1;Name=LOC102724034;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27384103	27384128	.	-	.	source_transcript=hg002_chrY_paternal_552.1;source_transcript_name=hg002_chrY_paternal_552.1;source_gene=hg002_chrY_paternal_552;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_552;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_552.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_552.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102724034;alternative_source_transcripts=hg002_chrY_paternal_626.1;transcript_id=HG03521_ch_T0000704;gene_id=HG03521_ch_G0000269;Parent=HG03521_ch_T0000704;transcript_name=hg002_chrY_paternal_552.1;gene_name=LOC102724034;ID=exon:HG03521_ch_T0000704:2;Name=LOC102724034;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27403326	27407123	.	+	.	source_gene_common_name=CSPG4P1Y;source_gene=hg002_chrY_paternal_556;gene_id=HG03521_ch_G0000270;gene_biotype=transcribed_pseudogene;gene_name=CSPG4P1Y;gene_sources=liftoff;ID=HG03521_ch_G0000270;Name=CSPG4P1Y
HG03521_chrY	CAT	transcript	27403326	27407123	1000	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03521_ch_T0000705;gene_id=HG03521_ch_G0000270;Parent=HG03521_ch_G0000270;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=HG03521_ch_T0000705;Name=CSPG4P1Y
HG03521_chrY	CAT	exon	27403326	27404048	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03521_ch_T0000705;gene_id=HG03521_ch_G0000270;Parent=HG03521_ch_T0000705;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03521_ch_T0000705:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27404049	27407051	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03521_ch_T0000705;gene_id=HG03521_ch_G0000270;Parent=HG03521_ch_T0000705;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=intron:HG03521_ch_T0000705:0;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27407052	27407123	.	+	.	source_transcript=hg002_chrY_paternal_556.1;source_transcript_name=hg002_chrY_paternal_556.1;source_gene=hg002_chrY_paternal_556;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_556;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_556.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_556.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CSPG4P1Y;transcript_id=HG03521_ch_T0000705;gene_id=HG03521_ch_G0000270;Parent=HG03521_ch_T0000705;transcript_name=hg002_chrY_paternal_556.1;gene_name=CSPG4P1Y;ID=exon:HG03521_ch_T0000705:1;Name=CSPG4P1Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27542542	27545941	.	+	.	source_gene_common_name=CDY1B;source_gene=hg002_chrY_paternal_565;gene_id=HG03521_ch_G0000271;gene_biotype=protein_coding;gene_name=CDY1B;gene_sources=liftoff;ID=HG03521_ch_G0000271;Name=CDY1B
HG03521_chrY	CAT	transcript	27542542	27544768	100	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000706;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_G0000271;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG03521_ch_T0000706;Name=CDY1B
HG03521_chrY	CAT	exon	27542542	27544768	.	+	.	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000706;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000706;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03521_ch_T0000706:0;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	27542873	27544495	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000706;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000706;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03521_ch_T0000706:0;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	27542873	27542875	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000706;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000706;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG03521_ch_T0000706;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	27544493	27544495	.	+	0	source_transcript=hg002_chrY_paternal_565.1;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000706;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000706;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG03521_ch_T0000706;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	27542547	27545332	100	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03521_ch_T0000707;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_G0000271;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG03521_ch_T0000707;Name=CDY1B
HG03521_chrY	CAT	exon	27542547	27544464	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03521_ch_T0000707;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03521_ch_T0000707:0;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	27542873	27544464	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03521_ch_T0000707;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03521_ch_T0000707:0;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	27542873	27542875	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03521_ch_T0000707;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG03521_ch_T0000707;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27544465	27544884	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03521_ch_T0000707;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG03521_ch_T0000707:0;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27544885	27545332	.	+	.	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03521_ch_T0000707;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03521_ch_T0000707:1;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	27544885	27544957	.	+	1	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03521_ch_T0000707;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03521_ch_T0000707:1;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	27544955	27544957	.	+	0	source_transcript=hg002_chrY_paternal_565.2;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.3;transcript_id=HG03521_ch_T0000707;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000707;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG03521_ch_T0000707;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	27542547	27545941	1000	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03521_ch_T0000708;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_G0000271;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=HG03521_ch_T0000708;Name=CDY1B
HG03521_chrY	CAT	exon	27542547	27544464	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03521_ch_T0000708;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000708;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG03521_ch_T0000708:0;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27544465	27544884	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03521_ch_T0000708;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000708;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:HG03521_ch_T0000708:0;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27544885	27545084	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03521_ch_T0000708;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000708;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG03521_ch_T0000708:1;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27545085	27545859	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03521_ch_T0000708;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000708;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=intron:HG03521_ch_T0000708:1;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27545860	27545941	.	+	.	source_transcript=hg002_chrY_paternal_565.3;source_transcript_name=hg002_chrY_paternal_565.1;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_565.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.3;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;alternative_source_transcripts=hg002_chrY_paternal_638.4;transcript_id=HG03521_ch_T0000708;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000708;transcript_name=hg002_chrY_paternal_565.1;gene_name=CDY1B;ID=exon:HG03521_ch_T0000708:2;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	27542555	27545332	100	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000709;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_G0000271;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=HG03521_ch_T0000709;Name=CDY1B
HG03521_chrY	CAT	exon	27542555	27544264	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000709;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03521_ch_T0000709:0;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	27542873	27544264	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000709;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03521_ch_T0000709:0;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	27542873	27542875	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000709;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=start_codon:HG03521_ch_T0000709;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27544265	27544884	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000709;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=intron:HG03521_ch_T0000709:0;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27544885	27545332	.	+	.	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000709;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=exon:HG03521_ch_T0000709:1;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	27544885	27544905	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000709;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=CDS:HG03521_ch_T0000709:1;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	27544903	27544905	.	+	0	source_transcript=hg002_chrY_paternal_565.4;source_transcript_name=hg002_chrY_paternal_565.4;source_gene=hg002_chrY_paternal_565;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_565;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_565.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_565.4;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=CDY1B;transcript_id=HG03521_ch_T0000709;gene_id=HG03521_ch_G0000271;Parent=HG03521_ch_T0000709;transcript_name=hg002_chrY_paternal_565.4;gene_name=CDY1B;ID=stop_codon:HG03521_ch_T0000709;Name=CDY1B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27648884	27653779	.	+	.	source_gene_common_name=TTTY3B;source_gene=hg002_chrY_paternal_645;alternative_source_transcripts=hg002_chrY_paternal_645.1;gene_id=HG03521_ch_G0000272;gene_biotype=lncRNA;gene_name=TTTY3B;gene_sources=liftoff;ID=HG03521_ch_G0000272;Name=TTTY3B
HG03521_chrY	CAT	transcript	27648884	27653779	1000	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03521_ch_T0000710;gene_id=HG03521_ch_G0000272;Parent=HG03521_ch_G0000272;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=HG03521_ch_T0000710;Name=TTTY3B
HG03521_chrY	CAT	exon	27648884	27648987	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03521_ch_T0000710;gene_id=HG03521_ch_G0000272;Parent=HG03521_ch_T0000710;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG03521_ch_T0000710:0;Name=TTTY3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27648988	27651185	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03521_ch_T0000710;gene_id=HG03521_ch_G0000272;Parent=HG03521_ch_T0000710;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG03521_ch_T0000710:0;Name=TTTY3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27651186	27651320	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03521_ch_T0000710;gene_id=HG03521_ch_G0000272;Parent=HG03521_ch_T0000710;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG03521_ch_T0000710:1;Name=TTTY3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27651321	27653674	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03521_ch_T0000710;gene_id=HG03521_ch_G0000272;Parent=HG03521_ch_T0000710;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=intron:HG03521_ch_T0000710:1;Name=TTTY3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27653675	27653779	.	+	.	source_transcript=hg002_chrY_paternal_645.1;source_transcript_name=hg002_chrY_paternal_645.1;source_gene=hg002_chrY_paternal_645;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_645;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_645.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_645.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=TTTY3B;alternative_source_transcripts=hg002_chrY_paternal_645.1;transcript_id=HG03521_ch_T0000710;gene_id=HG03521_ch_G0000272;Parent=HG03521_ch_T0000710;transcript_name=hg002_chrY_paternal_645.1;gene_name=TTTY3B;ID=exon:HG03521_ch_T0000710:2;Name=TTTY3B;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	27949694	27952818	.	-	.	source_gene_common_name=LOC107987352;source_gene=hg002_chrY_paternal_665;alternative_source_transcripts=hg002_chrY_paternal_665.1;gene_id=HG03521_ch_G0000273;gene_biotype=lncRNA;gene_name=LOC107987352;gene_sources=liftoff;ID=HG03521_ch_G0000273;Name=LOC107987352
HG03521_chrY	CAT	transcript	27949694	27952818	1000	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03521_ch_T0000711;gene_id=HG03521_ch_G0000273;Parent=HG03521_ch_G0000273;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=HG03521_ch_T0000711;Name=LOC107987352
HG03521_chrY	CAT	exon	27949694	27951022	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03521_ch_T0000711;gene_id=HG03521_ch_G0000273;Parent=HG03521_ch_T0000711;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG03521_ch_T0000711:0;Name=LOC107987352;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27951023	27952557	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03521_ch_T0000711;gene_id=HG03521_ch_G0000273;Parent=HG03521_ch_T0000711;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG03521_ch_T0000711:0;Name=LOC107987352;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27952558	27952618	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03521_ch_T0000711;gene_id=HG03521_ch_G0000273;Parent=HG03521_ch_T0000711;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG03521_ch_T0000711:1;Name=LOC107987352;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	27952619	27952735	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03521_ch_T0000711;gene_id=HG03521_ch_G0000273;Parent=HG03521_ch_T0000711;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=intron:HG03521_ch_T0000711:1;Name=LOC107987352;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	27952736	27952818	.	-	.	source_transcript=hg002_chrY_paternal_665.1;source_transcript_name=hg002_chrY_paternal_665.1;source_gene=hg002_chrY_paternal_665;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_665;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_665.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_665.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC107987352;alternative_source_transcripts=hg002_chrY_paternal_665.1;transcript_id=HG03521_ch_T0000711;gene_id=HG03521_ch_G0000273;Parent=HG03521_ch_T0000711;transcript_name=hg002_chrY_paternal_665.1;gene_name=LOC107987352;ID=exon:HG03521_ch_T0000711:2;Name=LOC107987352;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	28114266	28155764	.	-	.	source_gene_common_name=REREP2Y;source_gene=hg002_chrY_paternal_668;alternative_source_transcripts=hg002_chrY_paternal_668.1;gene_id=HG03521_ch_G0000274;gene_biotype=transcribed_pseudogene;gene_name=REREP2Y;gene_sources=liftoff;ID=HG03521_ch_G0000274;Name=REREP2Y
HG03521_chrY	CAT	transcript	28114266	28155764	1000	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03521_ch_T0000712;gene_id=HG03521_ch_G0000274;Parent=HG03521_ch_G0000274;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=HG03521_ch_T0000712;Name=REREP2Y
HG03521_chrY	CAT	exon	28114266	28118856	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03521_ch_T0000712;gene_id=HG03521_ch_G0000274;Parent=HG03521_ch_T0000712;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG03521_ch_T0000712:0;Name=REREP2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	28118857	28128472	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03521_ch_T0000712;gene_id=HG03521_ch_G0000274;Parent=HG03521_ch_T0000712;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG03521_ch_T0000712:0;Name=REREP2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	28128473	28128545	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03521_ch_T0000712;gene_id=HG03521_ch_G0000274;Parent=HG03521_ch_T0000712;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG03521_ch_T0000712:1;Name=REREP2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	28128546	28155361	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03521_ch_T0000712;gene_id=HG03521_ch_G0000274;Parent=HG03521_ch_T0000712;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=intron:HG03521_ch_T0000712:1;Name=REREP2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	28155362	28155764	.	-	.	source_transcript=hg002_chrY_paternal_668.1;source_transcript_name=hg002_chrY_paternal_668.1;source_gene=hg002_chrY_paternal_668;source_gene_biotype=transcribed_pseudogene;original_gene_id=hg002_chrY_paternal_668;gene_biotype=transcribed_pseudogene;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_668.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_668.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=REREP2Y;alternative_source_transcripts=hg002_chrY_paternal_668.1;transcript_id=HG03521_ch_T0000712;gene_id=HG03521_ch_G0000274;Parent=HG03521_ch_T0000712;transcript_name=hg002_chrY_paternal_668.1;gene_name=REREP2Y;ID=exon:HG03521_ch_T0000712:2;Name=REREP2Y;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	28167770	28167907	.	+	.	source_gene_common_name=LOC124900507;source_gene=hg002_chrY_paternal_669;alternative_source_transcripts=hg002_chrY_paternal_669.1;gene_id=HG03521_ch_G0000275;gene_biotype=snoRNA;gene_name=LOC124900507;gene_sources=liftoff;ID=HG03521_ch_G0000275;Name=LOC124900507
HG03521_chrY	CAT	transcript	28167770	28167907	1000	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=HG03521_ch_T0000713;gene_id=HG03521_ch_G0000275;Parent=HG03521_ch_G0000275;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=HG03521_ch_T0000713;Name=LOC124900507
HG03521_chrY	CAT	exon	28167770	28167907	.	+	.	source_transcript=hg002_chrY_paternal_669.1;source_transcript_name=hg002_chrY_paternal_669.1;source_gene=hg002_chrY_paternal_669;source_gene_biotype=snoRNA;original_gene_id=hg002_chrY_paternal_669;gene_biotype=snoRNA;transcript_biotype=snoRNA;alignment_id=hg002_chrY_paternal_669.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_669.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC124900507;alternative_source_transcripts=hg002_chrY_paternal_669.1;transcript_id=HG03521_ch_T0000713;gene_id=HG03521_ch_G0000275;Parent=HG03521_ch_T0000713;transcript_name=hg002_chrY_paternal_669.1;gene_name=LOC124900507;ID=exon:HG03521_ch_T0000713:0;Name=LOC124900507;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	28321539	28329535	.	-	.	source_gene_common_name=LOC105377244;source_gene=hg002_chrY_paternal_673;alternative_source_transcripts=hg002_chrY_paternal_673.1;gene_id=HG03521_ch_G0000276;gene_biotype=lncRNA;gene_name=LOC105377244;gene_sources=liftoff;ID=HG03521_ch_G0000276;Name=LOC105377244
HG03521_chrY	CAT	transcript	28321539	28329535	1000	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03521_ch_T0000714;gene_id=HG03521_ch_G0000276;Parent=HG03521_ch_G0000276;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=HG03521_ch_T0000714;Name=LOC105377244
HG03521_chrY	CAT	exon	28321539	28326142	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03521_ch_T0000714;gene_id=HG03521_ch_G0000276;Parent=HG03521_ch_T0000714;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG03521_ch_T0000714:0;Name=LOC105377244;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	28326143	28327008	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03521_ch_T0000714;gene_id=HG03521_ch_G0000276;Parent=HG03521_ch_T0000714;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG03521_ch_T0000714:0;Name=LOC105377244;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	28327009	28327175	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03521_ch_T0000714;gene_id=HG03521_ch_G0000276;Parent=HG03521_ch_T0000714;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG03521_ch_T0000714:1;Name=LOC105377244;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	28327176	28329304	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03521_ch_T0000714;gene_id=HG03521_ch_G0000276;Parent=HG03521_ch_T0000714;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=intron:HG03521_ch_T0000714:1;Name=LOC105377244;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	28329305	28329535	.	-	.	source_transcript=hg002_chrY_paternal_673.1;source_transcript_name=hg002_chrY_paternal_673.1;source_gene=hg002_chrY_paternal_673;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_673;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_673.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_673.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC105377244;alternative_source_transcripts=hg002_chrY_paternal_673.1;transcript_id=HG03521_ch_T0000714;gene_id=HG03521_ch_G0000276;Parent=HG03521_ch_T0000714;transcript_name=hg002_chrY_paternal_673.1;gene_name=LOC105377244;ID=exon:HG03521_ch_T0000714:2;Name=LOC105377244;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	28345044	28361217	.	+	.	source_gene_common_name=LOC102723869;source_gene=hg002_chrY_paternal_675;alternative_source_transcripts=hg002_chrY_paternal_675.1;gene_id=HG03521_ch_G0000277;gene_biotype=lncRNA;gene_name=LOC102723869;gene_sources=liftoff;ID=HG03521_ch_G0000277;Name=LOC102723869
HG03521_chrY	CAT	transcript	28345044	28361217	1000	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03521_ch_T0000715;gene_id=HG03521_ch_G0000277;Parent=HG03521_ch_G0000277;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=HG03521_ch_T0000715;Name=LOC102723869
HG03521_chrY	CAT	exon	28345044	28345311	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03521_ch_T0000715;gene_id=HG03521_ch_G0000277;Parent=HG03521_ch_T0000715;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03521_ch_T0000715:0;Name=LOC102723869;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	28345312	28357347	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03521_ch_T0000715;gene_id=HG03521_ch_G0000277;Parent=HG03521_ch_T0000715;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG03521_ch_T0000715:0;Name=LOC102723869;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	28357348	28357376	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03521_ch_T0000715;gene_id=HG03521_ch_G0000277;Parent=HG03521_ch_T0000715;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03521_ch_T0000715:1;Name=LOC102723869;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	28357377	28357470	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03521_ch_T0000715;gene_id=HG03521_ch_G0000277;Parent=HG03521_ch_T0000715;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG03521_ch_T0000715:1;Name=LOC102723869;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	28357471	28357543	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03521_ch_T0000715;gene_id=HG03521_ch_G0000277;Parent=HG03521_ch_T0000715;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03521_ch_T0000715:2;Name=LOC102723869;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	28357544	28361186	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03521_ch_T0000715;gene_id=HG03521_ch_G0000277;Parent=HG03521_ch_T0000715;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=intron:HG03521_ch_T0000715:2;Name=LOC102723869;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	28361187	28361217	.	+	.	source_transcript=hg002_chrY_paternal_675.1;source_transcript_name=hg002_chrY_paternal_675.1;source_gene=hg002_chrY_paternal_675;source_gene_biotype=lncRNA;original_gene_id=hg002_chrY_paternal_675;gene_biotype=lncRNA;transcript_biotype=lnc_RNA;alignment_id=hg002_chrY_paternal_675.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_675.1;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=LOC102723869;alternative_source_transcripts=hg002_chrY_paternal_675.1;transcript_id=HG03521_ch_T0000715;gene_id=HG03521_ch_G0000277;Parent=HG03521_ch_T0000715;transcript_name=hg002_chrY_paternal_675.1;gene_name=LOC102723869;ID=exon:HG03521_ch_T0000715:3;Name=LOC102723869;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	54584252	54598976	.	+	.	source_gene_common_name=SPRY3;source_gene=hg002_chrY_paternal_683;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;gene_id=HG03521_ch_G0000278;gene_biotype=protein_coding;gene_name=SPRY3;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000278;Name=SPRY3
HG03521_chrY	CAT	transcript	54584252	54598976	100	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000716;gene_id=HG03521_ch_G0000278;Parent=HG03521_ch_G0000278;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=HG03521_ch_T0000716;Name=SPRY3
HG03521_chrY	CAT	exon	54584252	54584595	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000716;gene_id=HG03521_ch_G0000278;Parent=HG03521_ch_T0000716;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG03521_ch_T0000716:0;Name=SPRY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54584596	54590235	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000716;gene_id=HG03521_ch_G0000278;Parent=HG03521_ch_T0000716;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=intron:HG03521_ch_T0000716:0;Name=SPRY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54590236	54598976	.	+	.	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000716;gene_id=HG03521_ch_G0000278;Parent=HG03521_ch_T0000716;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=exon:HG03521_ch_T0000716:1;Name=SPRY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54590342	54591208	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000716;gene_id=HG03521_ch_G0000278;Parent=HG03521_ch_T0000716;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=CDS:HG03521_ch_T0000716:0;Name=SPRY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	54590342	54590344	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000716;gene_id=HG03521_ch_G0000278;Parent=HG03521_ch_T0000716;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=start_codon:HG03521_ch_T0000716;Name=SPRY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	54591206	54591208	.	+	0	source_transcript=hg002_chrY_paternal_683.1;source_transcript_name=hg002_chrY_paternal_683.1;source_gene=hg002_chrY_paternal_683;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_683;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_683.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_683.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=SPRY3;alternative_source_transcripts=hg002_chrY_paternal_683.1,hg002_chrY_paternal_683.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000716;gene_id=HG03521_ch_G0000278;Parent=HG03521_ch_T0000716;transcript_name=hg002_chrY_paternal_683.1;gene_name=SPRY3;ID=stop_codon:HG03521_ch_T0000716;Name=SPRY3;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	54700592	54763028	.	+	.	source_gene_common_name=VAMP7;source_gene=hg002_chrY_paternal_687;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;gene_id=HG03521_ch_G0000279;gene_biotype=protein_coding;gene_name=VAMP7;gene_sources=liftoff,augTM;ID=HG03521_ch_G0000279;Name=VAMP7
HG03521_chrY	CAT	transcript	54700592	54763028	100	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_G0000279;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03521_ch_T0000717;Name=VAMP7
HG03521_chrY	CAT	exon	54700592	54700695	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000717:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54700696	54708705	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000717:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54708706	54708795	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000717:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54708715	54708795	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000717:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	54708715	54708717	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03521_ch_T0000717;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54708796	54717362	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000717:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54717363	54717500	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000717:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54717363	54717500	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000717:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54717501	54719747	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000717:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54719748	54719838	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000717:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54719748	54719838	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000717:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54719839	54739066	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000717:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54739067	54739134	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000717:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54739067	54739134	.	+	2	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000717:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54739135	54758960	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000717:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54758961	54759053	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000717:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54758961	54759053	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000717:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54759054	54761141	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000717:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54761142	54763028	.	+	.	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000717:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54761142	54761210	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000717:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	54761208	54761210	.	+	0	source_transcript=hg002_chrY_paternal_687.1;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.1;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.1;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.1,hg002_chrY_paternal_687.1;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000717;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000717;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03521_ch_T0000717;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	54700592	54763028	100	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_G0000279;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03521_ch_T0000718;Name=VAMP7
HG03521_chrY	CAT	exon	54700592	54700695	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000718:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54700696	54708705	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000718:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54708706	54708860	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000718:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54708715	54708860	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000718:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	54708715	54708717	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03521_ch_T0000718;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54708861	54714873	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000718:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54714874	54714931	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000718:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54714874	54714931	.	+	1	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000718:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54714932	54717362	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000718:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54717363	54717500	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000718:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54717363	54717500	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000718:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54717501	54719747	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000718:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54719748	54719838	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000718:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54719748	54719838	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000718:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54719839	54758960	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000718:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54758961	54759053	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000718:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54758961	54759053	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000718:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54759054	54761141	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000718:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54761142	54763028	.	+	.	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000718:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54761142	54761398	.	+	2	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000718:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	54761396	54761398	.	+	0	source_transcript=hg002_chrY_paternal_687.2;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.2;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.2;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.2,hg002_chrY_paternal_687.2;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000718;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000718;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03521_ch_T0000718;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	54700592	54763028	100	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_G0000279;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03521_ch_T0000719;Name=VAMP7
HG03521_chrY	CAT	exon	54700592	54700695	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000719:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54700696	54708705	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000719:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54708706	54708860	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000719:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54708715	54708860	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000719:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	54708715	54708717	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03521_ch_T0000719;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54708861	54714873	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000719:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54714874	54714931	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000719:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54714874	54714931	.	+	1	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000719:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54714932	54717362	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000719:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54717363	54717500	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000719:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54717363	54717500	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000719:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54717501	54719747	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000719:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54719748	54719838	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000719:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54719748	54719838	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000719:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54719839	54739066	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000719:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54739067	54739134	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000719:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54739067	54739134	.	+	2	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000719:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54739135	54758960	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000719:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54758961	54759053	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000719:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54758961	54759053	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000719:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54759054	54761141	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000719:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54761142	54763028	.	+	.	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000719:7;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54761142	54761210	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000719:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	54761208	54761210	.	+	0	source_transcript=hg002_chrY_paternal_687.3;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.3;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.3;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.3,hg002_chrY_paternal_687.3;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000719;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000719;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03521_ch_T0000719;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	54700592	54763028	100	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_G0000279;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03521_ch_T0000720;Name=VAMP7
HG03521_chrY	CAT	exon	54700592	54700695	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000720:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54700696	54708705	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000720:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54708706	54708881	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000720:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54708877	54708881	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000720:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	54708877	54708879	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03521_ch_T0000720;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54708882	54714873	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000720:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54714874	54714931	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000720:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54714874	54714931	.	+	1	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000720:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54714932	54717362	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000720:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54717363	54717500	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000720:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54717363	54717500	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000720:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54717501	54719747	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000720:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54719748	54719838	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000720:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54719748	54719838	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000720:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54719839	54758960	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000720:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54758961	54759053	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000720:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54758961	54759053	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000720:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54759054	54761141	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000720:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54761142	54763028	.	+	.	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000720:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54761142	54761398	.	+	2	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000720:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	54761396	54761398	.	+	0	source_transcript=hg002_chrY_paternal_687.6;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.6;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.6;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.6,hg002_chrY_paternal_687.6;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000720;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000720;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03521_ch_T0000720;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	54700592	54763028	100	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_G0000279;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=HG03521_ch_T0000721;Name=VAMP7
HG03521_chrY	CAT	exon	54700592	54700695	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000721:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54700696	54708705	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000721:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54708706	54708881	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000721:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54708877	54708881	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000721:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	54708877	54708879	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=start_codon:HG03521_ch_T0000721;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54708882	54714873	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000721:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54714874	54714931	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000721:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54714874	54714931	.	+	1	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000721:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54714932	54717362	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000721:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54717363	54717500	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000721:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54717363	54717500	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000721:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54717501	54719747	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000721:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54719748	54719838	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000721:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54719748	54719838	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000721:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54719839	54739066	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000721:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54739067	54739134	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000721:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54739067	54739134	.	+	2	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000721:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54739135	54758960	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000721:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54758961	54759053	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000721:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54758961	54759053	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000721:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54759054	54761141	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=intron:HG03521_ch_T0000721:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54761142	54763028	.	+	.	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=exon:HG03521_ch_T0000721:7;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54761142	54761210	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=CDS:HG03521_ch_T0000721:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	54761208	54761210	.	+	0	source_transcript=hg002_chrY_paternal_687.7;source_transcript_name=hg002_chrY_paternal_687.7;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_687.7;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.7;transcript_score=200.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.7,hg002_chrY_paternal_687.7;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000721;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000721;transcript_name=hg002_chrY_paternal_687.7;gene_name=VAMP7;ID=stop_codon:HG03521_ch_T0000721;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	54700592	54763028	1000	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_G0000279;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG03521_ch_T0000722;Name=VAMP7
HG03521_chrY	CAT	exon	54700592	54700695	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000722:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54700696	54708705	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000722:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54708706	54708860	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000722:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54708861	54717362	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000722:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54717363	54717500	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000722:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54717501	54719747	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000722:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54719748	54719838	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000722:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54719839	54739066	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000722:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54739067	54739134	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000722:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54739135	54758960	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000722:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54758961	54759053	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000722:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54759054	54761141	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000722:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54761142	54763028	.	+	.	source_transcript=hg002_chrY_paternal_687.4;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.4;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.4;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.4,hg002_chrY_paternal_687.4;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000722;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000722;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000722:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	transcript	54700592	54763028	1000	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;frameshift=N/A;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_G0000279;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=HG03521_ch_T0000723;Name=VAMP7
HG03521_chrY	CAT	exon	54700592	54700695	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000723:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54700696	54708705	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000723:0;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54708706	54708795	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000723:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54708796	54714873	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000723:1;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54714874	54714931	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000723:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54714932	54717362	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000723:2;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54717363	54717500	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000723:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54717501	54719747	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000723:3;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54719748	54719838	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000723:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54719839	54739066	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000723:4;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54739067	54739134	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000723:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54739135	54758960	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000723:5;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54758961	54759053	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000723:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54759054	54761141	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=intron:HG03521_ch_T0000723:6;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54761142	54763028	.	+	.	source_transcript=hg002_chrY_paternal_687.5;source_transcript_name=hg002_chrY_paternal_687.1;source_gene=hg002_chrY_paternal_687;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_687;gene_biotype=protein_coding;transcript_biotype=transcript;alignment_id=hg002_chrY_paternal_687.5;alignment_mode=liftoff;normalized_transcript_id=hg002_chrY_paternal_687.5;transcript_score=0.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=VAMP7;alternative_source_transcripts=hg002_chrY_paternal_687.5,hg002_chrY_paternal_687.5;AdditionalSources=augTM;transcript_id=HG03521_ch_T0000723;gene_id=HG03521_ch_G0000279;Parent=HG03521_ch_T0000723;transcript_name=hg002_chrY_paternal_687.1;gene_name=VAMP7;ID=exon:HG03521_ch_T0000723:7;Name=VAMP7;rna_support=False;reference_support=False
HG03521_chrY	CAT	gene	54816870	54830922	.	+	.	source_gene_common_name=IL9R;source_gene=hg002_chrY_paternal_691;gene_id=HG03521_ch_G0000280;gene_biotype=protein_coding;gene_name=IL9R;gene_sources=liftoff,augTM,transMap,transMap_pairwise;ID=HG03521_ch_G0000280;Name=IL9R
HG03521_chrY	CAT	transcript	54816870	54830922	9970	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;frameshift=False;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_G0000280;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=HG03521_ch_T0000724;Name=IL9R
HG03521_chrY	CAT	exon	54816870	54817048	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:0;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54817005	54817048	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03521_ch_T0000724:0;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	start_codon	54817005	54817007	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=start_codon:HG03521_ch_T0000724;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54817049	54820668	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03521_ch_T0000724:0;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54820669	54820769	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:1;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54820669	54820769	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03521_ch_T0000724:1;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54820770	54822170	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03521_ch_T0000724:1;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54822171	54822284	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:2;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54822171	54822284	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03521_ch_T0000724:2;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54822285	54822713	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03521_ch_T0000724:2;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54822714	54822825	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:3;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54822714	54822825	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03521_ch_T0000724:3;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54822826	54822941	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03521_ch_T0000724:3;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54822942	54823120	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:4;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54822942	54823120	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03521_ch_T0000724:4;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54823121	54823684	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03521_ch_T0000724:4;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54823685	54823830	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:5;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54823685	54823830	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03521_ch_T0000724:5;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54823831	54824542	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03521_ch_T0000724:5;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54824543	54824744	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:6;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54824543	54824744	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03521_ch_T0000724:6;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54824745	54825347	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03521_ch_T0000724:6;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54825348	54825453	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:7;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54825348	54825453	.	+	2	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03521_ch_T0000724:7;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54825454	54826788	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03521_ch_T0000724:7;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54826789	54826873	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:8;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54826789	54826873	.	+	1	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03521_ch_T0000724:8;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54826874	54827163	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03521_ch_T0000724:8;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54827164	54828549	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:9;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	CDS	54827164	54827400	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=CDS:HG03521_ch_T0000724:9;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	stop_codon	54827398	54827400	.	+	0	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=stop_codon:HG03521_ch_T0000724;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	intron	54828550	54828865	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=intron:HG03521_ch_T0000724:9;Name=IL9R;rna_support=False;reference_support=False
HG03521_chrY	CAT	exon	54828866	54830922	.	+	.	source_transcript=hg002_chrY_paternal_691.5;source_transcript_name=hg002_chrY_paternal_691.13;source_gene=hg002_chrY_paternal_691;source_gene_biotype=protein_coding;original_gene_id=hg002_chrY_paternal_691;gene_biotype=protein_coding;transcript_biotype=protein_coding;alignment_id=hg002_chrY_paternal_691.5;alignment_mode=transMap;normalized_transcript_id=hg002_chrY_paternal_691.5;transcript_score=300.0;transcript_class=ortholog;valid_start=True;valid_stop=True;proper_orf=True;exon_annotation_support=;intron_annotation_support=;exon_rna_support=;intron_rna_support=;source_gene_common_name=IL9R;AdditionalSources=augTM,liftoff,transMap_pairwise;transcript_id=HG03521_ch_T0000724;gene_id=HG03521_ch_G0000280;Parent=HG03521_ch_T0000724;transcript_name=hg002_chrY_paternal_691.13;gene_name=IL9R;ID=exon:HG03521_ch_T0000724:10;Name=IL9R;rna_support=False;reference_support=False